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Search of human proteins with 226442963
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|226442963 jumonji, AT rich interactive domain 1C isoform 2
[Homo sapiens]
(1379 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [H... 2821 0.0
gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [H... 2638 0.0
gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Ho... 2328 0.0
gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [H... 2312 0.0
gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [H... 2306 0.0
gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo sa... 1311 0.0
gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo sa... 1311 0.0
gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens] 1154 0.0
gi|169218173 PREDICTED: similar to Jumonji, AT rich interactive ... 960 0.0
gi|11863152 jumonji, AT rich interactive domain 2 protein [Homo ... 146 2e-34
gi|239755681 PREDICTED: hypothetical protein [Homo sapiens] 142 2e-33
gi|239750150 PREDICTED: hypothetical protein [Homo sapiens] 142 2e-33
gi|239744460 PREDICTED: hypothetical protein [Homo sapiens] 142 2e-33
gi|39653317 jumonji domain containing 2D [Homo sapiens] 142 3e-33
gi|226442893 jumonji domain containing 2C isoform 3 [Homo sapiens] 137 5e-32
gi|169203160 PREDICTED: hypothetical protein [Homo sapiens] 137 5e-32
gi|169203656 PREDICTED: hypothetical protein [Homo sapiens] 137 5e-32
gi|169202387 PREDICTED: hypothetical protein [Homo sapiens] 137 5e-32
gi|226442897 jumonji domain containing 2C isoform 4 [Homo sapiens] 137 5e-32
gi|226442889 jumonji domain containing 2C isoform 2 [Homo sapiens] 137 5e-32
gi|109255247 jumonji domain containing 2C isoform 1 [Homo sapiens] 137 5e-32
gi|98986459 jumonji domain containing 2A [Homo sapiens] 137 7e-32
gi|45504380 jumonji domain containing 2B [Homo sapiens] 132 2e-30
gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo... 73 2e-12
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa... 70 1e-11
gi|221139764 PHD and ring finger domains 1 [Homo sapiens] 70 2e-11
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 67 2e-10
gi|205830434 D4, zinc and double PHD fingers family 1 isoform c ... 66 3e-10
gi|205830430 D4, zinc and double PHD fingers family 1 isoform a ... 66 3e-10
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 65 3e-10
>gi|226442963 jumonji, AT rich interactive domain 1C isoform 2 [Homo
sapiens]
Length = 1379
Score = 2821 bits (7313), Expect = 0.0
Identities = 1379/1379 (100%), Positives = 1379/1379 (100%)
Query: 1 MEPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPAIVVEEGGYEA 60
MEPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPAIVVEEGGYEA
Sbjct: 1 MEPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPAIVVEEGGYEA 60
Query: 61 ICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCNTRPFDNEEKD 120
ICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCNTRPFDNEEKD
Sbjct: 61 ICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCNTRPFDNEEKD 120
Query: 121 KEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQIYGAGPKMMG 180
KEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQIYGAGPKMMG
Sbjct: 121 KEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQIYGAGPKMMG 180
Query: 181 LGLMAKDKTLRKKDKEGPECPPTVVVKEELGGDVKVESTSPKTFLESKEELSHSPEPCTK 240
LGLMAKDKTLRKKDKEGPECPPTVVVKEELGGDVKVESTSPKTFLESKEELSHSPEPCTK
Sbjct: 181 LGLMAKDKTLRKKDKEGPECPPTVVVKEELGGDVKVESTSPKTFLESKEELSHSPEPCTK 240
Query: 241 MTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWR 300
MTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWR
Sbjct: 241 MTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWR 300
Query: 301 CPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWR 360
CPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWR
Sbjct: 301 CPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWR 360
Query: 361 LVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVL 420
LVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVL
Sbjct: 361 LVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVL 420
Query: 421 CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEE 480
CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEE
Sbjct: 421 CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEE 480
Query: 481 VMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ 540
VMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ
Sbjct: 481 VMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQ 540
Query: 541 GYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVH 600
GYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVH
Sbjct: 541 GYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVH 600
Query: 601 KEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDG 660
KEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDG
Sbjct: 601 KEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDG 660
Query: 661 LVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGR 720
LVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGR
Sbjct: 661 LVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGR 720
Query: 721 KRSLEELRALESEARERRFPNSELLQQLKNCLSEAEACVSRALGLVSGQEAGPHRVAGLQ 780
KRSLEELRALESEARERRFPNSELLQQLKNCLSEAEACVSRALGLVSGQEAGPHRVAGLQ
Sbjct: 721 KRSLEELRALESEARERRFPNSELLQQLKNCLSEAEACVSRALGLVSGQEAGPHRVAGLQ 780
Query: 781 MTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVEAYQAEAREALASLPSSPGLLQSLLER 840
MTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVEAYQAEAREALASLPSSPGLLQSLLER
Sbjct: 781 MTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVEAYQAEAREALASLPSSPGLLQSLLER 840
Query: 841 GRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVD 900
GRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVD
Sbjct: 841 GRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVD 900
Query: 901 KAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAENIPVHLPNIQALKEALA 960
KAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAENIPVHLPNIQALKEALA
Sbjct: 901 KAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAENIPVHLPNIQALKEALA 960
Query: 961 KARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1020
KARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK
Sbjct: 961 KARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASK 1020
Query: 1021 TFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDLRDPGSVI 1080
TFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDLRDPGSVI
Sbjct: 1021 TFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDLRDPGSVI 1080
Query: 1081 VAFKEGEQKEKEGILQLRRTNSAKPSPLASSSTASSTTSICVCGQVLAGAGALQCDLCQD 1140
VAFKEGEQKEKEGILQLRRTNSAKPSPLASSSTASSTTSICVCGQVLAGAGALQCDLCQD
Sbjct: 1081 VAFKEGEQKEKEGILQLRRTNSAKPSPLASSSTASSTTSICVCGQVLAGAGALQCDLCQD 1140
Query: 1141 WFHGRCVSVPRLLSSPRPNPTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILALLVALQR 1200
WFHGRCVSVPRLLSSPRPNPTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILALLVALQR
Sbjct: 1141 WFHGRCVSVPRLLSSPRPNPTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILALLVALQR 1200
Query: 1201 LPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGRLAELRQRLQAEPRPEEPPNY 1260
LPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGRLAELRQRLQAEPRPEEPPNY
Sbjct: 1201 LPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGRLAELRQRLQAEPRPEEPPNY 1260
Query: 1261 PAAPASDPLREGSGKDMPKVQGLLENGDSVTSPEKVAPEEGSDLELLSSLLPQLTGPVLE 1320
PAAPASDPLREGSGKDMPKVQGLLENGDSVTSPEKVAPEEGSDLELLSSLLPQLTGPVLE
Sbjct: 1261 PAAPASDPLREGSGKDMPKVQGLLENGDSVTSPEKVAPEEGSDLELLSSLLPQLTGPVLE 1320
Query: 1321 LPEATRAPLEELMMEGDLLEVTLDENHSIPESLDFCILTPRYCSDLSSWGPAPGVFPPW 1379
LPEATRAPLEELMMEGDLLEVTLDENHSIPESLDFCILTPRYCSDLSSWGPAPGVFPPW
Sbjct: 1321 LPEATRAPLEELMMEGDLLEVTLDENHSIPESLDFCILTPRYCSDLSSWGPAPGVFPPW 1379
>gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [Homo
sapiens]
Length = 1560
Score = 2638 bits (6839), Expect = 0.0
Identities = 1299/1302 (99%), Positives = 1299/1302 (99%), Gaps = 3/1302 (0%)
Query: 51 IVVEEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCN 110
IVVEEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCN
Sbjct: 118 IVVEEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCN 177
Query: 111 TRPFDNEEKDKEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQ 170
TRPFDNEEKDKEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQ
Sbjct: 178 TRPFDNEEKDKEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQ 237
Query: 171 IYGAGPKMMGLGLMAKDKTLRKKDKEGPECPPTVVVKEELGGDVKVESTSPKTFLESKEE 230
IYGAGPKMMGLGLMAKDKTLRKKDKEGPECPPTVVVKEELGGDVKVESTSPKTFLESKEE
Sbjct: 238 IYGAGPKMMGLGLMAKDKTLRKKDKEGPECPPTVVVKEELGGDVKVESTSPKTFLESKEE 297
Query: 231 LSHSPEPCTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPP 290
LSHSPEPCTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPP
Sbjct: 298 LSHSPEPCTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPP 357
Query: 291 LPEIPKGVWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHMVP 350
LPEIPKGVWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHMVP
Sbjct: 358 LPEIPKGVWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHMVP 417
Query: 351 TELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLN 410
TELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLN
Sbjct: 418 TELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLN 477
Query: 411 VMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGV 470
VMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGV
Sbjct: 478 VMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGV 537
Query: 471 PSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITF 530
PSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITF
Sbjct: 538 PSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITF 597
Query: 531 PRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEK 590
PRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEK
Sbjct: 598 PRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEK 657
Query: 591 LDLNLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLS 650
LDLNLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLS
Sbjct: 658 LDLNLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLS 717
Query: 651 ALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKV 710
ALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKV
Sbjct: 718 ALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKV 777
Query: 711 RVALEVEDGRKRSLEELRALESEARERRFPNSELLQQLKNCLSEAEACVSRALGLVSGQE 770
RVALEVEDGRKRSLEELRALESEARERRFPNSELLQQLKNCLSEAEACVSRALGLVSGQE
Sbjct: 778 RVALEVEDGRKRSLEELRALESEARERRFPNSELLQQLKNCLSEAEACVSRALGLVSGQE 837
Query: 771 AGPHRVAGLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVEAYQAEAREALASLPSS 830
AGPHRVAGLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVEAYQAEAREALASLPSS
Sbjct: 838 AGPHRVAGLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVEAYQAEAREALASLPSS 897
Query: 831 PGLLQSLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAG 890
PGLLQSLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAG
Sbjct: 898 PGLLQSLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAG 957
Query: 891 ASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAENIPVHLP 950
ASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAENIPVHLP
Sbjct: 958 ASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAENIPVHLP 1017
Query: 951 NIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLT 1010
NIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLT
Sbjct: 1018 NIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLT 1077
Query: 1011 AHSWREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSA 1070
AHSWREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSA
Sbjct: 1078 AHSWREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSA 1137
Query: 1071 QDLRDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLASSSTASSTTSICVCGQVLAGA 1130
QDLRDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLASSSTASSTTSICVCGQVLAGA
Sbjct: 1138 QDLRDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLASSSTASSTTSICVCGQVLAGA 1197
Query: 1131 GALQCDLCQDWFHGRCVSVPRLLSSPRPNPTSSPLLAWWEWDTKFLCPLCMRSRRPRLET 1190
GALQCDLCQDWFHGRCVSVPRLLSSPRPNPTSSPLLAWWEWDTKFLCPLCMRSRRPRLET
Sbjct: 1198 GALQCDLCQDWFHGRCVSVPRLLSSPRPNPTSSPLLAWWEWDTKFLCPLCMRSRRPRLET 1257
Query: 1191 ILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGRLAELRQRLQA 1250
ILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGRLAELRQRLQA
Sbjct: 1258 ILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGRLAELRQRLQA 1317
Query: 1251 EPRPEEPPNYPAAPASDPLREGSGKDMPKVQGLLENGDSVTSPEKVAPEEGS---DLELL 1307
EPRPEEPPNYPAAPASDPLREGSGKDMPKVQGLLENGDSVTSPEKVAPEEGS DLELL
Sbjct: 1318 EPRPEEPPNYPAAPASDPLREGSGKDMPKVQGLLENGDSVTSPEKVAPEEGSGKRDLELL 1377
Query: 1308 SSLLPQLTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSI 1349
SSLLPQLTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSI
Sbjct: 1378 SSLLPQLTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSI 1419
>gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Homo
sapiens]
Length = 1539
Score = 2328 bits (6033), Expect = 0.0
Identities = 1143/1301 (87%), Positives = 1211/1301 (93%), Gaps = 17/1301 (1%)
Query: 51 IVVEEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCN 110
IV+EEGGYEAICKDRRWARVAQRL+YPPGKNIGSLLRSHYERI+YPYEM+QSGAN VQCN
Sbjct: 118 IVIEEGGYEAICKDRRWARVAQRLHYPPGKNIGSLLRSHYERIIYPYEMFQSGANHVQCN 177
Query: 111 TRPFDNEEKDKEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQ 170
T PFDNE KDKEYKPHSIPLRQSVQPSKF+SY RRAKRLQPDPEPTEEDIEK+PELKKLQ
Sbjct: 178 THPFDNEVKDKEYKPHSIPLRQSVQPSKFSSYSRRAKRLQPDPEPTEEDIEKHPELKKLQ 237
Query: 171 IYGAGPKMMGLGLMAKDK--TLRKKDKEGPECPPTVVVKEELGGDVKVESTSPKTFLESK 228
IYG GPKMMGLGLMAKDK T+ KK CPPTV VK+E G V ST K L
Sbjct: 238 IYGPGPKMMGLGLMAKDKDKTVHKK----VTCPPTVTVKDEQSGGGNVSSTLLKQHL--- 290
Query: 229 EELSHSPEPCTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLL 288
S EPCTK TM+LR+NHS+AQFI+SY+C++CSRGDEDDKLL CDGCDDNYHIFCLL
Sbjct: 291 -----SLEPCTKTTMQLRKNHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLL 345
Query: 289 PPLPEIPKGVWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHM 348
PPLPEIP+G+WRCPKC++AECK+PPEAFGFEQAT+EY+LQSFGEMADSFK+DYFNMPVHM
Sbjct: 346 PPLPEIPRGIWRCPKCILAECKQPPEAFGFEQATQEYSLQSFGEMADSFKSDYFNMPVHM 405
Query: 349 VPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWN 408
VPTELVEKEFWRLV+SIEEDVTVEYGADIHSKEFGSGFPVS+SK++L+PEE+EYATSGWN
Sbjct: 406 VPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYATSGWN 465
Query: 409 LNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY 468
LNVMPVL+QSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY
Sbjct: 466 LNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY 525
Query: 469 GVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVI 528
GVPSLAAEHLEEVMK LTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVI
Sbjct: 526 GVPSLAAEHLEEVMKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVI 585
Query: 529 TFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACP 588
TFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAA P
Sbjct: 586 TFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFP 645
Query: 589 EKLDLNLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCF 648
E LDLNLA AVHKEMFIMVQEERRLRKALLEKG+TEAEREAFELLPDDERQCIKCKTTCF
Sbjct: 646 ETLDLNLAVAVHKEMFIMVQEERRLRKALLEKGVTEAEREAFELLPDDERQCIKCKTTCF 705
Query: 649 LSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWAN 708
LSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELP MLHKLK+RAESFDTWAN
Sbjct: 706 LSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDTWAN 765
Query: 709 KVRVALEVEDGRKRSLEELRALESEARERRFPNSELLQQLKNCLSEAEACVSRALGLVSG 768
KVRVALEVEDGRKRS EELRALESEARERRFPNSELLQ+LKNCLSE EAC+++ LGLVSG
Sbjct: 766 KVRVALEVEDGRKRSFEELRALESEARERRFPNSELLQRLKNCLSEVEACIAQVLGLVSG 825
Query: 769 QEAGPHRVAGLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVEAYQAEAREALASLP 828
Q A R+ Q+TLTELR L+QM +LPCAMHQIGDVK VLEQVEAYQAEAREALA+LP
Sbjct: 826 QVA---RMDTPQLTLTELRVLLEQMGSLPCAMHQIGDVKDVLEQVEAYQAEAREALATLP 882
Query: 829 SSPGLLQSLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLV 888
SSPGLL+SLLERG+QLGVEVPEA QLQ+QVEQA+WLDEVK+ LAPSA RG+L +M+GLLV
Sbjct: 883 SSPGLLRSLLERGQQLGVEVPEAHQLQQQVEQAQWLDEVKQALAPSAHRGSLVIMQGLLV 942
Query: 889 AGASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAENIPVH 948
GA +A SP+VDKA+AELQELLTIAERWEEKAH CLEARQKHPPATLEAIIRE ENIPVH
Sbjct: 943 MGAKIASSPSVDKARAELQELLTIAERWEEKAHFCLEARQKHPPATLEAIIRETENIPVH 1002
Query: 949 LPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQV 1008
LPNIQALKEAL KA+AWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQV
Sbjct: 1003 LPNIQALKEALTKAQAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQV 1062
Query: 1009 LTAHSWREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGL 1068
LTAHSWREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEK LGLY+ DTELLGL
Sbjct: 1063 LTAHSWREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKALGLYQCDTELLGL 1122
Query: 1069 SAQDLRDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLASSSTASSTTSICVCGQVLA 1128
SAQDLRDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLA S ASS TSICVCGQV A
Sbjct: 1123 SAQDLRDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLAPSLMASSPTSICVCGQVPA 1182
Query: 1129 GAGALQCDLCQDWFHGRCVSVPRLLSSPRPNPTSSPLLAWWEWDTKFLCPLCMRSRRPRL 1188
G G LQCDLCQDWFHG+CVSVP LL+SP+P+ TSSPLLAWWEWDTKFLCPLCMRSRRPRL
Sbjct: 1183 GVGVLQCDLCQDWFHGQCVSVPHLLTSPKPSLTSSPLLAWWEWDTKFLCPLCMRSRRPRL 1242
Query: 1189 ETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGRLAELRQRL 1248
ETILALLVALQRLPVRLPEGEALQCLTERAI WQ RAR+ALASEDVTALL +LAELRQ+L
Sbjct: 1243 ETILALLVALQRLPVRLPEGEALQCLTERAIGWQDRARKALASEDVTALLRQLAELRQQL 1302
Query: 1249 QAEPRPEEPPNYPAAPASDPLREGSGKDMPKVQGLLENGDSVTSPEKVAPEEGSDLELLS 1308
QA+PRPEE Y +A A DP+REGSG ++ KVQGLLENGDSVTSPE +AP +GSDLELLS
Sbjct: 1303 QAKPRPEEASVYTSATACDPIREGSGNNISKVQGLLENGDSVTSPENMAPGKGSDLELLS 1362
Query: 1309 SLLPQLTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSI 1349
SLLPQLTGPVLELPEA RAPLEELMMEGDLLEVTLDENHSI
Sbjct: 1363 SLLPQLTGPVLELPEAIRAPLEELMMEGDLLEVTLDENHSI 1403
Score = 107 bits (267), Expect = 8e-23
Identities = 47/50 (94%), Positives = 49/50 (98%)
Query: 1 MEPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPA 50
MEPG D+FLPPPECPVFEPSWAEF+DPLGYIAKIRPIAEKSGICKIRPPA
Sbjct: 1 MEPGCDEFLPPPECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPA 50
>gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [Homo
sapiens]
Length = 1570
Score = 2312 bits (5992), Expect = 0.0
Identities = 1143/1332 (85%), Positives = 1211/1332 (90%), Gaps = 48/1332 (3%)
Query: 51 IVVEEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCN 110
IV+EEGGYEAICKDRRWARVAQRL+YPPGKNIGSLLRSHYERI+YPYEM+QSGAN VQCN
Sbjct: 118 IVIEEGGYEAICKDRRWARVAQRLHYPPGKNIGSLLRSHYERIIYPYEMFQSGANHVQCN 177
Query: 111 TRPFDNEEKDKEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQ 170
T PFDNE KDKEYKPHSIPLRQSVQPSKF+SY RRAKRLQPDPEPTEEDIEK+PELKKLQ
Sbjct: 178 THPFDNEVKDKEYKPHSIPLRQSVQPSKFSSYSRRAKRLQPDPEPTEEDIEKHPELKKLQ 237
Query: 171 IYGAGPKMMGLGLMAKDK--TLRKKDKEGPECPPTVVVKEELGGDVKVESTSPKTFLESK 228
IYG GPKMMGLGLMAKDK T+ KK CPPTV VK+E G V ST K L
Sbjct: 238 IYGPGPKMMGLGLMAKDKDKTVHKK----VTCPPTVTVKDEQSGGGNVSSTLLKQHL--- 290
Query: 229 EELSHSPEPCTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLL 288
S EPCTK TM+LR+NHS+AQFI+SY+C++CSRGDEDDKLL CDGCDDNYHIFCLL
Sbjct: 291 -----SLEPCTKTTMQLRKNHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLL 345
Query: 289 PPLPEIPKGVWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHM 348
PPLPEIP+G+WRCPKC++AECK+PPEAFGFEQAT+EY+LQSFGEMADSFK+DYFNMPVHM
Sbjct: 346 PPLPEIPRGIWRCPKCILAECKQPPEAFGFEQATQEYSLQSFGEMADSFKSDYFNMPVHM 405
Query: 349 VPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEE--------- 399
VPTELVEKEFWRLV+SIEEDVTVEYGADIHSKEFGSGFPVS+SK++L+PEE
Sbjct: 406 VPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKRQSLTVLT 465
Query: 400 ----------------------EEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYV 437
+EYATSGWNLNVMPVL+QSVLCHINADISGMKVPWLYV
Sbjct: 466 RLISSFWAQAVLPPWPPKVLGLQEYATSGWNLNVMPVLDQSVLCHINADISGMKVPWLYV 525
Query: 438 GMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLL 497
GMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK LTPELFDSQPDLL
Sbjct: 526 GMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKMLTPELFDSQPDLL 585
Query: 498 HQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLP 557
HQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLP
Sbjct: 586 HQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLP 645
Query: 558 AGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKAL 617
AGRQCIEHYRRLRRYCVFSHEELICKMAA PE LDLNLA AVHKEMFIMVQEERRLRKAL
Sbjct: 646 AGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAVHKEMFIMVQEERRLRKAL 705
Query: 618 LEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSR 677
LEKG+TEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSR
Sbjct: 706 LEKGVTEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSR 765
Query: 678 QYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRALESEARER 737
QYLRYRYTLDELP MLHKLK+RAESFDTWANKVRVALEVEDGRKRS EELRALESEARER
Sbjct: 766 QYLRYRYTLDELPTMLHKLKIRAESFDTWANKVRVALEVEDGRKRSFEELRALESEARER 825
Query: 738 RFPNSELLQQLKNCLSEAEACVSRALGLVSGQEAGPHRVAGLQMTLTELRAFLDQMNNLP 797
RFPNSELLQ+LKNCLSE EAC+++ LGLVSGQ A R+ Q+TLTELR L+QM +LP
Sbjct: 826 RFPNSELLQRLKNCLSEVEACIAQVLGLVSGQVA---RMDTPQLTLTELRVLLEQMGSLP 882
Query: 798 CAMHQIGDVKGVLEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEVPEAQQLQRQ 857
CAMHQIGDVK VLEQVEAYQAEAREALA+LPSSPGLL+SLLERG+QLGVEVPEA QLQ+Q
Sbjct: 883 CAMHQIGDVKDVLEQVEAYQAEAREALATLPSSPGLLRSLLERGQQLGVEVPEAHQLQQQ 942
Query: 858 VEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTIAERWE 917
VEQA+WLDEVK+ LAPSA RG+L +M+GLLV GA +A SP+VDKA+AELQELLTIAERWE
Sbjct: 943 VEQAQWLDEVKQALAPSAHRGSLVIMQGLLVMGAKIASSPSVDKARAELQELLTIAERWE 1002
Query: 918 EKAHLCLEARQKHPPATLEAIIREAENIPVHLPNIQALKEALAKARAWIADVDEIQNGDH 977
EKAH CLEARQKHPPATLEAIIRE ENIPVHLPNIQALKEAL KA+AWIADVDEIQNGDH
Sbjct: 1003 EKAHFCLEARQKHPPATLEAIIRETENIPVHLPNIQALKEALTKAQAWIADVDEIQNGDH 1062
Query: 978 YPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASKTFLKKNSCYTLLEVLCP 1037
YPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASKTFLKKNSCYTLLEVLCP
Sbjct: 1063 YPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASKTFLKKNSCYTLLEVLCP 1122
Query: 1038 CADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQL 1097
CADAGSDSTKRSRWMEK LGLY+ DTELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQL
Sbjct: 1123 CADAGSDSTKRSRWMEKALGLYQCDTELLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQL 1182
Query: 1098 RRTNSAKPSPLASSSTASSTTSICVCGQVLAGAGALQCDLCQDWFHGRCVSVPRLLSSPR 1157
RRTNSAKPSPLA S ASS TSICVCGQV AG G LQCDLCQDWFHG+CVSVP LL+SP+
Sbjct: 1183 RRTNSAKPSPLAPSLMASSPTSICVCGQVPAGVGVLQCDLCQDWFHGQCVSVPHLLTSPK 1242
Query: 1158 PNPTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILALLVALQRLPVRLPEGEALQCLTER 1217
P+ TSSPLLAWWEWDTKFLCPLCMRSRRPRLETILALLVALQRLPVRLPEGEALQCLTER
Sbjct: 1243 PSLTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILALLVALQRLPVRLPEGEALQCLTER 1302
Query: 1218 AISWQGRARQALASEDVTALLGRLAELRQRLQAEPRPEEPPNYPAAPASDPLREGSGKDM 1277
AI WQ RAR+ALASEDVTALL +LAELRQ+LQA+PRPEE Y +A A DP+REGSG ++
Sbjct: 1303 AIGWQDRARKALASEDVTALLRQLAELRQQLQAKPRPEEASVYTSATACDPIREGSGNNI 1362
Query: 1278 PKVQGLLENGDSVTSPEKVAPEEGSDLELLSSLLPQLTGPVLELPEATRAPLEELMMEGD 1337
KVQGLLENGDSVTSPE +AP +GSDLELLSSLLPQLTGPVLELPEA RAPLEELMMEGD
Sbjct: 1363 SKVQGLLENGDSVTSPENMAPGKGSDLELLSSLLPQLTGPVLELPEAIRAPLEELMMEGD 1422
Query: 1338 LLEVTLDENHSI 1349
LLEVTLDENHSI
Sbjct: 1423 LLEVTLDENHSI 1434
Score = 107 bits (267), Expect = 8e-23
Identities = 47/50 (94%), Positives = 49/50 (98%)
Query: 1 MEPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPA 50
MEPG D+FLPPPECPVFEPSWAEF+DPLGYIAKIRPIAEKSGICKIRPPA
Sbjct: 1 MEPGCDEFLPPPECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPA 50
>gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [Homo
sapiens]
Length = 1482
Score = 2306 bits (5975), Expect = 0.0
Identities = 1148/1365 (84%), Positives = 1224/1365 (89%), Gaps = 35/1365 (2%)
Query: 1 MEPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPAIVVEEGGYEA 60
MEPG D+FLPPPECPVFEPSWAEF+DPLGYIAKIRPIAEKSGICKIRPPA E
Sbjct: 1 MEPGCDEFLPPPECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV 60
Query: 61 ICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLV------------- 107
+ R+ QRLN + L ++ ++I +E+ S +
Sbjct: 61 --DNFRFTPRVQRLNELEAQTRVKL--NYLDQIAKFWEIQGSSLKIPNVERKILDLYSLS 116
Query: 108 -QCNTRPFDNEEKDKEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPEL 166
QCNT PFDNE KDKEYKPHSIPLRQSVQPSKF+SY RRAKRLQPDPEPTEEDIEK+PEL
Sbjct: 117 KQCNTHPFDNEVKDKEYKPHSIPLRQSVQPSKFSSYSRRAKRLQPDPEPTEEDIEKHPEL 176
Query: 167 KKLQIYGAGPKMMGLGLMAKDK--TLRKKDKEGPECPPTVVVKEELGGDVKVESTSPKTF 224
KKLQIYG GPKMMGLGLMAKDK T+ KK CPPTV VK+E G V ST K
Sbjct: 177 KKLQIYGPGPKMMGLGLMAKDKDKTVHKK----VTCPPTVTVKDEQSGGGNVSSTLLKQH 232
Query: 225 LESKEELSHSPEPCTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHI 284
L S EPCTK TM+LR+NHS+AQFI+SY+C++CSRGDEDDKLL CDGCDDNYHI
Sbjct: 233 L--------SLEPCTKTTMQLRKNHSSAQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHI 284
Query: 285 FCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNM 344
FCLLPPLPEIP+G+WRCPKC++AECK+PPEAFGFEQAT+EY+LQSFGEMADSFK+DYFNM
Sbjct: 285 FCLLPPLPEIPRGIWRCPKCILAECKQPPEAFGFEQATQEYSLQSFGEMADSFKSDYFNM 344
Query: 345 PVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYAT 404
PVHMVPTELVEKEFWRLV+SIEEDVTVEYGADIHSKEFGSGFPVS+SK++L+PEE+EYAT
Sbjct: 345 PVHMVPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKEYAT 404
Query: 405 SGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEP 464
SGWNLNVMPVL+QSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEP
Sbjct: 405 SGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEP 464
Query: 465 KTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAG 524
KTWYGVPSLAAEHLEEVMK LTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAG
Sbjct: 465 KTWYGVPSLAAEHLEEVMKMLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAG 524
Query: 525 EFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKM 584
EFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKM
Sbjct: 525 EFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKM 584
Query: 585 AACPEKLDLNLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCK 644
AA PE LDLNLA AVHKEMFIMVQEERRLRKALLEKG+TEAEREAFELLPDDERQCIKCK
Sbjct: 585 AAFPETLDLNLAVAVHKEMFIMVQEERRLRKALLEKGVTEAEREAFELLPDDERQCIKCK 644
Query: 645 TTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFD 704
TTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELP MLHKLK+RAESFD
Sbjct: 645 TTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFD 704
Query: 705 TWANKVRVALEVEDGRKRSLEELRALESEARERRFPNSELLQQLKNCLSEAEACVSRALG 764
TWANKVRVALEVEDGRKRS EELRALESEARERRFPNSELLQ+LKNCLSE EAC+++ LG
Sbjct: 705 TWANKVRVALEVEDGRKRSFEELRALESEARERRFPNSELLQRLKNCLSEVEACIAQVLG 764
Query: 765 LVSGQEAGPHRVAGLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVEAYQAEAREAL 824
LVSGQ A R+ Q+TLTELR L+QM +LPCAMHQIGDVK VLEQVEAYQAEAREAL
Sbjct: 765 LVSGQVA---RMDTPQLTLTELRVLLEQMGSLPCAMHQIGDVKDVLEQVEAYQAEAREAL 821
Query: 825 ASLPSSPGLLQSLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMR 884
A+LPSSPGLL+SLLERG+QLGVEVPEA QLQ+QVEQA+WLDEVK+ LAPSA RG+L +M+
Sbjct: 822 ATLPSSPGLLRSLLERGQQLGVEVPEAHQLQQQVEQAQWLDEVKQALAPSAHRGSLVIMQ 881
Query: 885 GLLVAGASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAEN 944
GLLV GA +A SP+VDKA+AELQELLTIAERWEEKAH CLEARQKHPPATLEAIIRE EN
Sbjct: 882 GLLVMGAKIASSPSVDKARAELQELLTIAERWEEKAHFCLEARQKHPPATLEAIIRETEN 941
Query: 945 IPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQL 1004
IPVHLPNIQALKEAL KA+AWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQL
Sbjct: 942 IPVHLPNIQALKEALTKAQAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQL 1001
Query: 1005 ELQVLTAHSWREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTE 1064
ELQVLTAHSWREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEK LGLY+ DTE
Sbjct: 1002 ELQVLTAHSWREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKALGLYQCDTE 1061
Query: 1065 LLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLASSSTASSTTSICVCG 1124
LLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLA S ASS TSICVCG
Sbjct: 1062 LLGLSAQDLRDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLAPSLMASSPTSICVCG 1121
Query: 1125 QVLAGAGALQCDLCQDWFHGRCVSVPRLLSSPRPNPTSSPLLAWWEWDTKFLCPLCMRSR 1184
QV AG G LQCDLCQDWFHG+CVSVP LL+SP+P+ TSSPLLAWWEWDTKFLCPLCMRSR
Sbjct: 1122 QVPAGVGVLQCDLCQDWFHGQCVSVPHLLTSPKPSLTSSPLLAWWEWDTKFLCPLCMRSR 1181
Query: 1185 RPRLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGRLAEL 1244
RPRLETILALLVALQRLPVRLPEGEALQCLTERAI WQ RAR+ALASEDVTALL +LAEL
Sbjct: 1182 RPRLETILALLVALQRLPVRLPEGEALQCLTERAIGWQDRARKALASEDVTALLRQLAEL 1241
Query: 1245 RQRLQAEPRPEEPPNYPAAPASDPLREGSGKDMPKVQGLLENGDSVTSPEKVAPEEGSDL 1304
RQ+LQA+PRPEE Y +A A DP+REGSG ++ KVQGLLENGDSVTSPE +AP +GSDL
Sbjct: 1242 RQQLQAKPRPEEASVYTSATACDPIREGSGNNISKVQGLLENGDSVTSPENMAPGKGSDL 1301
Query: 1305 ELLSSLLPQLTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSI 1349
ELLSSLLPQLTGPVLELPEA RAPLEELMMEGDLLEVTLDENHSI
Sbjct: 1302 ELLSSLLPQLTGPVLELPEAIRAPLEELMMEGDLLEVTLDENHSI 1346
>gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo
sapiens]
Length = 1690
Score = 1311 bits (3393), Expect = 0.0
Identities = 675/1250 (54%), Positives = 870/1250 (69%), Gaps = 68/1250 (5%)
Query: 22 AEFRDPLGYIAKIRPIAEKSGICKIRPPAIVVEEGGYEAICKDRRWARVAQRLNYPPGKN 81
A+F + G KI P+ E+ + IV +GG+E + K+++W++V RL Y PGK
Sbjct: 95 AKFWELQGSTLKI-PVVERKILDLYALSKIVASKGGFEMVTKEKKWSKVGSRLGYLPGKG 153
Query: 82 IGSLLRSHYERIVYPYEMYQSGANLVQCNTRPFDNEEKDKEYKPHSIPLRQSVQP-SKFN 140
GSLL+SHYERI+YPYE++QSG +L+ D +EK E + S + S +P ++ N
Sbjct: 154 TGSLLKSHYERILYPYELFQSGVSLMGVQMPNLDLKEK-VEPEVLSTDTQTSPEPGTRMN 212
Query: 141 SYGRRAKRLQPDPEPTEEDIEKNPELKKLQIYGAGPKMMGLGLMAKDKTLRKKDKEGPEC 200
+R +R++ E D+ +N ELKKLQI+GAGPK++GL + KDK
Sbjct: 213 ILPKRTRRVKTQSE--SGDVSRNTELKKLQIFGAGPKVVGLAMGTKDK------------ 258
Query: 201 PPTVVVKEELGGDVKVESTSPKTFLESKEELSHSPEPCTKMTMRLRRNHSNAQFIESYVC 260
++E+ KV + S M MR R+ + F++ YVC
Sbjct: 259 ------EDEVTRRRKVTNRSD----------------AFNMQMRQRKGTLSVNFVDLYVC 296
Query: 261 RMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFGFEQ 320
C RG+ +DKLLLCDGCDD+YH FCL+PPLP++PKG WRCPKCV EC +P EAFGFEQ
Sbjct: 297 MFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECSKPREAFGFEQ 356
Query: 321 ATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIHSK 380
A REYTLQSFGEMAD+FK+DYFNMPVHMVPTELVEKEFWRLV+SIEEDV VEYGADI SK
Sbjct: 357 AVREYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSK 416
Query: 381 EFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMV 440
+FGSGFPV D +R + PEEEEYA SGWNLN MPVLEQSVL HIN DISGMKVPWLYVGM
Sbjct: 417 DFGSGFPVKDGRRKILPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMC 476
Query: 441 FSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQL 500
FS+FCWHIEDHWSYSINYLHWGEPKTWYGVPS AAE LEEVM++L PELF+SQPDLLHQL
Sbjct: 477 FSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQL 536
Query: 501 VTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 560
VT+MNPN LM HGVPV RTNQCAGEFV+TFPRAYHSGFNQGYNFAEAVNFCTADWLP GR
Sbjct: 537 VTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGR 596
Query: 561 QCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKALLEK 620
QC+ HYRRLRR+CVFSHEELI KMAA PE LD+ LAA V KE+ +M +EE RLR+++++
Sbjct: 597 QCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRESVVQM 656
Query: 621 GITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYL 680
G+ +E E FEL+PDDERQC C+TTCFLSAL C P+ LVCL H DLC C ++ L
Sbjct: 657 GVLMSEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDLCPCPMQKKCL 716
Query: 681 RYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRALESEARERRFP 740
RYRY L++LP++L+ +KVRA+S+DTW ++V AL K+ L ELR + +A +R++P
Sbjct: 717 RYRYPLEDLPSLLYGVKVRAQSYDTWVSRVTEALSANFNHKKDLIELRVMLEDAEDRKYP 776
Query: 741 NSELLQQLKNCLSEAEACVSRALGLVSGQEAGPHRVA------GLQMTLTELRAFLDQMN 794
++L ++L++ + EAE C S A L+S ++ HR + ++T+ EL+AF+ Q+
Sbjct: 777 ENDLFRKLRDAVKEAETCASVAQLLLSKKQ--KHRQSPDSGRTRTKLTVEELKAFVQQLF 834
Query: 795 NLPCAMHQIGDVKGVLEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEVPEAQQL 854
+LPC + Q VK +L+ VE + A+EA+ LQ L++ G L VE+PE +L
Sbjct: 835 SLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRL 894
Query: 855 QRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTIAE 914
+++++QARWLDEV+ TL+ ++ TL VM+ L+ +G +AP AV+KA AELQELLT++E
Sbjct: 895 KQELQQARWLDEVRLTLS-DPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSE 953
Query: 915 RWEEKAHLCLEARQKHPPATLEAIIREAENIPVHLPNIQALKEALAKARAWIADVDEIQN 974
RWEEKA +CL+AR +H A+LE+I+ EA+NIP LPN+ +LKEAL KAR W A V+ IQ+
Sbjct: 954 RWEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVEAIQS 1013
Query: 975 GDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASKTFLKKNSCYTLLEV 1034
G +Y L+ LE L A GR +PV LE L Q+E QV A +WRE+ +TFLKKNS +TLL+V
Sbjct: 1014 GSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQV 1073
Query: 1035 LCPCADAG-SDSTKRSRWMEKELGLYKSDTEL-------LGLSAQDLRDPGSVIVAFKEG 1086
L P D G S K R KEL + + +L L ++ RD V+ FKE
Sbjct: 1074 LSPRTDIGVYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEEGLEETRDTAMVVAVFKER 1133
Query: 1087 EQKEKEGILQLRRTNSAKPSPLASSSTASSTTSICVCGQVLAGAGALQCDLCQDWFHGRC 1146
EQKE E + LR N AK + + C+C + +G LQC+LC+DWFH C
Sbjct: 1134 EQKEIEAMHSLRAANLAKMTMV----DRIEEVKFCICRKTASGF-MLQCELCKDWFHNSC 1188
Query: 1147 VSVPRLLSSPRPNPTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILALLVALQRLPVRLP 1206
V +P+ S + + +W + KFLCPLCMRSRRPRLETIL+LLV+LQ+LPVRLP
Sbjct: 1189 VPLPKSSSQKKGS-------SWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLP 1241
Query: 1207 EGEALQCLTERAISWQGRARQALASEDVTALLGRLAELRQRLQAEPRPEE 1256
EGEALQCLTERA+SWQ RARQALA++++++ L +L+ L QR+ + E+
Sbjct: 1242 EGEALQCLTERAMSWQDRARQALATDELSSALAKLSVLSQRMVEQAAREK 1291
Score = 82.8 bits (203), Expect = 2e-15
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 7 DFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPP 49
+F+PPPECPVFEPSW EF DPL +I +IRP+AEK+GICKIRPP
Sbjct: 12 EFVPPPECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPP 54
>gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo
sapiens]
Length = 1641
Score = 1311 bits (3393), Expect = 0.0
Identities = 675/1250 (54%), Positives = 870/1250 (69%), Gaps = 68/1250 (5%)
Query: 22 AEFRDPLGYIAKIRPIAEKSGICKIRPPAIVVEEGGYEAICKDRRWARVAQRLNYPPGKN 81
A+F + G KI P+ E+ + IV +GG+E + K+++W++V RL Y PGK
Sbjct: 95 AKFWELQGSTLKI-PVVERKILDLYALSKIVASKGGFEMVTKEKKWSKVGSRLGYLPGKG 153
Query: 82 IGSLLRSHYERIVYPYEMYQSGANLVQCNTRPFDNEEKDKEYKPHSIPLRQSVQP-SKFN 140
GSLL+SHYERI+YPYE++QSG +L+ D +EK E + S + S +P ++ N
Sbjct: 154 TGSLLKSHYERILYPYELFQSGVSLMGVQMPNLDLKEK-VEPEVLSTDTQTSPEPGTRMN 212
Query: 141 SYGRRAKRLQPDPEPTEEDIEKNPELKKLQIYGAGPKMMGLGLMAKDKTLRKKDKEGPEC 200
+R +R++ E D+ +N ELKKLQI+GAGPK++GL + KDK
Sbjct: 213 ILPKRTRRVKTQSE--SGDVSRNTELKKLQIFGAGPKVVGLAMGTKDK------------ 258
Query: 201 PPTVVVKEELGGDVKVESTSPKTFLESKEELSHSPEPCTKMTMRLRRNHSNAQFIESYVC 260
++E+ KV + S M MR R+ + F++ YVC
Sbjct: 259 ------EDEVTRRRKVTNRSD----------------AFNMQMRQRKGTLSVNFVDLYVC 296
Query: 261 RMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPEAFGFEQ 320
C RG+ +DKLLLCDGCDD+YH FCL+PPLP++PKG WRCPKCV EC +P EAFGFEQ
Sbjct: 297 MFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECSKPREAFGFEQ 356
Query: 321 ATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIHSK 380
A REYTLQSFGEMAD+FK+DYFNMPVHMVPTELVEKEFWRLV+SIEEDV VEYGADI SK
Sbjct: 357 AVREYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSK 416
Query: 381 EFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMV 440
+FGSGFPV D +R + PEEEEYA SGWNLN MPVLEQSVL HIN DISGMKVPWLYVGM
Sbjct: 417 DFGSGFPVKDGRRKILPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMC 476
Query: 441 FSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQL 500
FS+FCWHIEDHWSYSINYLHWGEPKTWYGVPS AAE LEEVM++L PELF+SQPDLLHQL
Sbjct: 477 FSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQL 536
Query: 501 VTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 560
VT+MNPN LM HGVPV RTNQCAGEFV+TFPRAYHSGFNQGYNFAEAVNFCTADWLP GR
Sbjct: 537 VTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGR 596
Query: 561 QCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQEERRLRKALLEK 620
QC+ HYRRLRR+CVFSHEELI KMAA PE LD+ LAA V KE+ +M +EE RLR+++++
Sbjct: 597 QCVNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRESVVQM 656
Query: 621 GITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDGLVCLSHINDLCKCSSSRQYL 680
G+ +E E FEL+PDDERQC C+TTCFLSAL C P+ LVCL H DLC C ++ L
Sbjct: 657 GVLMSEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDLCPCPMQKKCL 716
Query: 681 RYRYTLDELPAMLHKLKVRAESFDTWANKVRVALEVEDGRKRSLEELRALESEARERRFP 740
RYRY L++LP++L+ +KVRA+S+DTW ++V AL K+ L ELR + +A +R++P
Sbjct: 717 RYRYPLEDLPSLLYGVKVRAQSYDTWVSRVTEALSANFNHKKDLIELRVMLEDAEDRKYP 776
Query: 741 NSELLQQLKNCLSEAEACVSRALGLVSGQEAGPHRVA------GLQMTLTELRAFLDQMN 794
++L ++L++ + EAE C S A L+S ++ HR + ++T+ EL+AF+ Q+
Sbjct: 777 ENDLFRKLRDAVKEAETCASVAQLLLSKKQ--KHRQSPDSGRTRTKLTVEELKAFVQQLF 834
Query: 795 NLPCAMHQIGDVKGVLEQVEAYQAEAREALASLPSSPGLLQSLLERGRQLGVEVPEAQQL 854
+LPC + Q VK +L+ VE + A+EA+ LQ L++ G L VE+PE +L
Sbjct: 835 SLPCVISQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRL 894
Query: 855 QRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASVAPSPAVDKAQAELQELLTIAE 914
+++++QARWLDEV+ TL+ ++ TL VM+ L+ +G +AP AV+KA AELQELLT++E
Sbjct: 895 KQELQQARWLDEVRLTLS-DPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSE 953
Query: 915 RWEEKAHLCLEARQKHPPATLEAIIREAENIPVHLPNIQALKEALAKARAWIADVDEIQN 974
RWEEKA +CL+AR +H A+LE+I+ EA+NIP LPN+ +LKEAL KAR W A V+ IQ+
Sbjct: 954 RWEEKAKVCLQARPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVEAIQS 1013
Query: 975 GDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHSWREKASKTFLKKNSCYTLLEV 1034
G +Y L+ LE L A GR +PV LE L Q+E QV A +WRE+ +TFLKKNS +TLL+V
Sbjct: 1014 GSNYAYLEQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQV 1073
Query: 1035 LCPCADAG-SDSTKRSRWMEKELGLYKSDTEL-------LGLSAQDLRDPGSVIVAFKEG 1086
L P D G S K R KEL + + +L L ++ RD V+ FKE
Sbjct: 1074 LSPRTDIGVYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEEGLEETRDTAMVVAVFKER 1133
Query: 1087 EQKEKEGILQLRRTNSAKPSPLASSSTASSTTSICVCGQVLAGAGALQCDLCQDWFHGRC 1146
EQKE E + LR N AK + + C+C + +G LQC+LC+DWFH C
Sbjct: 1134 EQKEIEAMHSLRAANLAKMTMV----DRIEEVKFCICRKTASGF-MLQCELCKDWFHNSC 1188
Query: 1147 VSVPRLLSSPRPNPTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILALLVALQRLPVRLP 1206
V +P+ S + + +W + KFLCPLCMRSRRPRLETIL+LLV+LQ+LPVRLP
Sbjct: 1189 VPLPKSSSQKKGS-------SWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLP 1241
Query: 1207 EGEALQCLTERAISWQGRARQALASEDVTALLGRLAELRQRLQAEPRPEE 1256
EGEALQCLTERA+SWQ RARQALA++++++ L +L+ L QR+ + E+
Sbjct: 1242 EGEALQCLTERAMSWQDRARQALATDELSSALAKLSVLSQRMVEQAAREK 1291
Score = 82.8 bits (203), Expect = 2e-15
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 7 DFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPP 49
+F+PPPECPVFEPSW EF DPL +I +IRP+AEK+GICKIRPP
Sbjct: 12 EFVPPPECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPP 54
Score = 45.4 bits (106), Expect = 4e-04
Identities = 26/43 (60%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 1308 SSLLPQ-LTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSI 1349
S L+P+ L PVLEL +A LEELMM GDLLEV+LDE I
Sbjct: 1428 SPLVPRSLEPPVLELSPGAKAQLEELMMVGDLLEVSLDETQHI 1470
>gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens]
Length = 1544
Score = 1154 bits (2984), Expect = 0.0
Identities = 629/1323 (47%), Positives = 833/1323 (62%), Gaps = 108/1323 (8%)
Query: 51 IVVEEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCN 110
+V EEGG+ +CKDR+W ++A ++ + PGK +GS +R HYERI+ PY ++ SG +L +C
Sbjct: 136 LVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILNPYNLFLSGDSL-RCL 194
Query: 111 TRP-FDNEEKDKEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKL 169
+P + KDKEYKPH IP RQSVQPS+ RRAKR++ + + + E+ E
Sbjct: 195 QKPNLTTDTKDKEYKPHDIPQRQSVQPSETCPPARRAKRMRAEAMNIKIEPEETTE---- 250
Query: 170 QIYGAGPKMMGLGLMAKDKTLRKKDKEGPECP-PTVVVKEELGGDVKVESTSPKTFLESK 228
A+ LR++ CP P ++E+ +K E K ++
Sbjct: 251 ---------------ARTHNLRRR----MGCPTPKCENEKEMKSSIKQEPIERKDYIVEN 291
Query: 229 EELSHSPEPCTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLL 288
E+ P+ +K +NA ++ YVC +C G+++D+LLLCDGCDD+YH FCL+
Sbjct: 292 EK--EKPKSRSKKA-------TNA--VDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLI 340
Query: 289 PPLPEIPKGVWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHM 348
PPL ++PKG WRCPKC+ EC +P EAFGFEQA R+YTL++FGEMAD+FK+DYFNMPVHM
Sbjct: 341 PPLHDVPKGDWRCPKCLAQECSKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHM 400
Query: 349 VPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWN 408
VPTELVEKEFWRLV++IEEDVTVEYGADI SKEFGSGFPV D K L+PEEEEY SGWN
Sbjct: 401 VPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWN 460
Query: 409 LNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY 468
LN MPV+EQSVL HI ADI GMK+PWLYVGM FS+FCWHIEDHWSYSINYLHWGEPKTWY
Sbjct: 461 LNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWY 520
Query: 469 GVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVI 528
GVP AAE LE VMKKL PELF SQPDLLHQLVT+MNPNTLM+H VPV RTNQCAGEFVI
Sbjct: 521 GVPGYAAEQLENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVI 580
Query: 529 TFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACP 588
TFPRAYHSGFNQG+NFAEAVNFCT DWLP GRQC+EHYR L RYCVFSH+E+ICKMA+
Sbjct: 581 TFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKA 640
Query: 589 EKLDLNLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCF 648
+ LD+ +A+ V K+M IM+++E+ LR+ + + G+ ++ER FELLPDDERQC+KCKTTCF
Sbjct: 641 DVLDVVVASTVQKDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQCVKCKTTCF 700
Query: 649 LSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWAN 708
+SA++C P LVCL H+ +LC C + LRYRYTLD+L M++ LK+RAES++ WA
Sbjct: 701 MSAISCSCKPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWAL 760
Query: 709 KVRVALEVEDGRKRSLEELRALESEARERRFPNSELLQQLKNCLSEAEACVSRALGLVSG 768
V ALE + +K+SL +AL E+ ++FP+++LL+ L+ +AE C S A L++G
Sbjct: 761 NVNEALEAKINKKKSLVSFKALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNG 820
Query: 769 QEAGPHRVAG----LQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVEAYQAEAREAL 824
+ +R G Q+T+ ELR F+ Q+ LPC + Q +K +L +VE +Q +++ L
Sbjct: 821 KRQTRYRSGGGKSQNQLTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLL 880
Query: 825 ASLPSSPGLLQSLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRT-LAPSARRGTLAVM 883
+ S LQ LL+ + VE+P+ +++ ++EQARWL+EV++ L PS+ TL M
Sbjct: 881 SEETPSAAELQDLLDVSFEFDVELPQLAEMRIRLEQARWLEEVQQACLDPSSL--TLDDM 938
Query: 884 RGLLVAGASVAPSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAE 943
R L+ G +AP AV+KA A LQELLT++E W++KA L+AR +H +L ++E E
Sbjct: 939 RRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKAKSLLKARPRHSLNSLATAVKEIE 998
Query: 944 NIPVHLPNIQALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQ 1003
IP +LPN ALK+++ +AR W+ DV+ +Q G P LD L LV GR +PV L L +
Sbjct: 999 EIPAYLPNGAALKDSVQRARDWLQDVEGLQAGGRVPVLDTLIELVTRGRSIPVHLNSLPR 1058
Query: 1004 LELQVLTAHSWREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKE--LGLYKS 1061
LE V +W+E A TFL +NS Y+LLEVLCP D G KR + KE K
Sbjct: 1059 LETLVAEVQAWKECAVNTFLTENSPYSLLEVLCPRCDIGLLGLKRKQRKLKEPLPNGKKK 1118
Query: 1062 DTELLGLS-----AQDLRDPGSVIVAFKEGEQKEKEGILQLRRTNSAK-PSPLASSSTAS 1115
T+L LS + ++ S + E +E E + LR N K SPL
Sbjct: 1119 STKLESLSDLERALTESKETASAMATLGEARLREMEALQSLRLANEGKLLSPLQDVD--- 1175
Query: 1116 STTSICVCGQVLAGAGALQCDLCQDWFHGRCVSVPRLLSSPRPNPTSSPLLAWWEWDTKF 1175
IC+C Q A +QC+LC+D FH CV+VP + S L W
Sbjct: 1176 --IKICLC-QKAPAAPMIQCELCRDAFHTSCVAVPSI---------SQGLRIW------- 1216
Query: 1176 LCPLCMRSRRPRLETILALLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVT 1235
LCP C RS +P LE IL LL +LQR+ VRLPEG+AL+ + ER ++WQ RA+Q L+S ++
Sbjct: 1217 LCPHCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQLLSSGNLK 1276
Query: 1236 ALLGRLAE--LRQRLQAEPRPEEPPN---YPAAPASDPLREGSGKDMPKVQGLLENGDSV 1290
+ R+ L R QA N P S L + + G S
Sbjct: 1277 FVQDRVGSGLLYSRWQASAGQVSDTNKVSQPPGTTSFSLPDDWDNRTSYLHSPFSTGRSC 1336
Query: 1291 TSPEKVAPEEGSDLELLSSLLPQLTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSIP 1350
V+PE + EL+ME LL+V+L E +
Sbjct: 1337 IPLHGVSPE-----------------------------VNELLMEAQLLQVSLPEIQELY 1367
Query: 1351 ESL 1353
++L
Sbjct: 1368 QTL 1370
Score = 81.6 bits (200), Expect = 5e-15
Identities = 33/43 (76%), Positives = 38/43 (88%)
Query: 7 DFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPP 49
+FLPPPECPVFEPSW EF DP +I KIRPIAE++GICK+RPP
Sbjct: 25 EFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPP 67
>gi|169218173 PREDICTED: similar to Jumonji, AT rich interactive
domain 1B (RBP2-like), partial [Homo sapiens]
Length = 977
Score = 960 bits (2481), Expect = 0.0
Identities = 478/877 (54%), Positives = 625/877 (71%), Gaps = 44/877 (5%)
Query: 51 IVVEEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCN 110
+V EEGG+ +CKDR+W ++A ++ + PGK +GS +R HYERI+ PY ++ SG +L +C
Sbjct: 136 LVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILNPYNLFLSGDSL-RCL 194
Query: 111 TRP-FDNEEKDKEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKL 169
+P + KDKEYKPH IP RQSVQPS+ RRAKR++ + + + E+ E
Sbjct: 195 QKPNLTTDTKDKEYKPHDIPQRQSVQPSETCPPARRAKRMRAEAMNIKIEPEETTE---- 250
Query: 170 QIYGAGPKMMGLGLMAKDKTLRKKDKEGPECP-PTVVVKEELGGDVKVESTSPKTFLESK 228
A+ LR++ CP P ++E+ +K E K ++
Sbjct: 251 ---------------ARTHNLRRR----MGCPTPKCENEKEMKSSIKQEPIERKDYIVEN 291
Query: 229 EELSHSPEPCTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLL 288
E+ P+ +K +NA ++ YVC +C G+++D+LLLCDGCDD+YH FCL+
Sbjct: 292 EK--EKPKSRSKKA-------TNA--VDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLI 340
Query: 289 PPLPEIPKGVWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHM 348
PPL ++PKG WRCPKC+ EC +P EAFGFEQA R+YTL++FGEMAD+FK+DYFNMPVHM
Sbjct: 341 PPLHDVPKGDWRCPKCLAQECSKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHM 400
Query: 349 VPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWN 408
VPTELVEKEFWRLV++IEEDVTVEYGADI SKEFGSGFPV D K L+PEEEEY SGWN
Sbjct: 401 VPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWN 460
Query: 409 LNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWY 468
LN MPV+EQSVL HI ADI GMK+PWLYVGM FS+FCWHIEDHWSYSINYLHWGEPKTWY
Sbjct: 461 LNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWY 520
Query: 469 GVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVI 528
GVP AAE LE VMKKL PELF SQPDLLHQLVT+MNPNTLM+H VPV RTNQCAGEFVI
Sbjct: 521 GVPGYAAEQLENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVI 580
Query: 529 TFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACP 588
TFPRAYHSGFNQG+NFAEAVNFCT DWLP GRQC+EHYR L RYCVFSH+E+ICKMA+
Sbjct: 581 TFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKA 640
Query: 589 EKLDLNLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCF 648
+ LD+ +A+ V K+M IM+++E+ LR+ + + G+ ++ER FELLPDDERQC+KCKTTCF
Sbjct: 641 DVLDVVVASTVQKDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQCVKCKTTCF 700
Query: 649 LSALACYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWAN 708
+SA++C P LVCL H+ +LC C + LRYRYTLD+L M++ LK+RAES++ WA
Sbjct: 701 MSAISCSCKPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWAL 760
Query: 709 KVRVALEVEDGRKRSLEELRALESEARERRFPNSELLQQLKNCLSEAEACVSRALGLVSG 768
V ALE + +K+SL +AL E+ ++FP+++LL+ L+ +AE C S A L++G
Sbjct: 761 NVNEALEAKINKKKSLVSFKALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNG 820
Query: 769 QEAGPHRVAG----LQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVEAYQAEAREAL 824
+ +R G Q+T+ ELR F+ Q+ LPC + Q +K +L +VE +Q +++ L
Sbjct: 821 KRQTRYRSGGGKSQNQLTVNELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLL 880
Query: 825 ASLPSSPGLLQSLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRT-LAPSARRGTLAVM 883
+ S LQ LL+ + VE+P+ +++ ++EQARWL+EV++ L PS+ TL M
Sbjct: 881 SEETPSAAELQDLLDVSFEFDVELPQLAEMRIRLEQARWLEEVQQACLDPSSL--TLDDM 938
Query: 884 RGLLVAGASVAPSPAVDKAQAELQELLTIAERWEEKA 920
R L+ G +AP AV+KA A LQELLT++E W++KA
Sbjct: 939 RRLIDLGVGLAPYSAVEKAMARLQELLTVSEHWDDKA 975
Score = 81.6 bits (200), Expect = 5e-15
Identities = 33/43 (76%), Positives = 38/43 (88%)
Query: 7 DFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPP 49
+FLPPPECPVFEPSW EF DP +I KIRPIAE++GICK+RPP
Sbjct: 25 EFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPP 67
>gi|11863152 jumonji, AT rich interactive domain 2 protein [Homo
sapiens]
Length = 1246
Score = 146 bits (368), Expect = 2e-34
Identities = 107/372 (28%), Positives = 174/372 (46%), Gaps = 50/372 (13%)
Query: 354 VEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMP 413
+E+E+WRLV + V V G + + GSGFPV S E ++ GWNL V+P
Sbjct: 846 IEQEYWRLVEEKDCHVAVHCGK-VDTNTHGSGFPVGKS--------EPFSRHGWNLTVLP 896
Query: 414 VLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSL 473
S+L H+ A + G+ +PWL +GMVFS CW + + I+YLH G WY +P+
Sbjct: 897 NNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAE 955
Query: 474 AAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRA 533
LE+V+ L +L V +++P L G+ V RT Q +G+FV+ FP +
Sbjct: 956 EENKLEDVVHTLLQANGTPGLQMLESNV-MISPEVLCKEGIKVHRTVQQSGQFVVCFPGS 1014
Query: 534 YHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLD- 592
+ S GY+ +E V+F T W G + + +R FS E+L+ ++A K +
Sbjct: 1015 FVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKEN 1074
Query: 593 ---LNLAAAVHKEMFIMVQEERRLRKALLEKGITEAER-----------------EAFEL 632
L+ +A+ E + E R R+ L E G+ + R +
Sbjct: 1075 GPTLSTISALLDE---LRDTELRQRRQLFEAGLHSSARYGSHDGSSTVADGKKKPRKWLQ 1131
Query: 633 LPDDERQCIKCKTTCFLSALA--------CYDCPDGLVCLSHINDLCKCSSSRQYLRYRY 684
L ER+C C+ C+LS + C +C L H+ C + L YRY
Sbjct: 1132 LETSERRCQICQHLCYLSMVVQENENVVFCLEC-----ALRHVEKQKSCRGLK--LMYRY 1184
Query: 685 TLDELPAMLHKL 696
+++ ++++++
Sbjct: 1185 DEEQIISLVNQI 1196
Score = 43.1 bits (100), Expect = 0.002
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 13 ECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPP 49
E PV PS EF DPL YI +R EK G+C++ PP
Sbjct: 556 EIPVLRPSAKEFHDPLIYIESVRAQVEKFGMCRVIPP 592
>gi|239755681 PREDICTED: hypothetical protein [Homo sapiens]
Length = 506
Score = 142 bits (358), Expect = 2e-33
Identities = 68/160 (42%), Positives = 93/160 (58%)
Query: 401 EYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLH 460
E +T WNL + + + I G+ P+LY GM + F WH ED YSINYLH
Sbjct: 143 EESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLH 202
Query: 461 WGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTN 520
+GEPKTWY VP +HLE + ++L P++ L V L++P L +G+P
Sbjct: 203 FGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLRHKVALISPTVLKENGIPFNCMT 262
Query: 521 QCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 560
Q AGEF++TFP YH+GFN G+N AEA+NF T W+ G+
Sbjct: 263 QEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGK 302
>gi|239750150 PREDICTED: hypothetical protein [Homo sapiens]
Length = 506
Score = 142 bits (358), Expect = 2e-33
Identities = 68/160 (42%), Positives = 93/160 (58%)
Query: 401 EYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLH 460
E +T WNL + + + I G+ P+LY GM + F WH ED YSINYLH
Sbjct: 143 EESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLH 202
Query: 461 WGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTN 520
+GEPKTWY VP +HLE + ++L P++ L V L++P L +G+P
Sbjct: 203 FGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLRHKVALISPTVLKENGIPFNCMT 262
Query: 521 QCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 560
Q AGEF++TFP YH+GFN G+N AEA+NF T W+ G+
Sbjct: 263 QEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGK 302
>gi|239744460 PREDICTED: hypothetical protein [Homo sapiens]
Length = 506
Score = 142 bits (358), Expect = 2e-33
Identities = 68/160 (42%), Positives = 93/160 (58%)
Query: 401 EYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLH 460
E +T WNL + + + I G+ P+LY GM + F WH ED YSINYLH
Sbjct: 143 EESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLH 202
Query: 461 WGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTN 520
+GEPKTWY VP +HLE + ++L P++ L V L++P L +G+P
Sbjct: 203 FGEPKTWYVVPPEHGQHLERLARELFPDISRGCEAFLRHKVALISPTVLKENGIPFNCMT 262
Query: 521 QCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 560
Q AGEF++TFP YH+GFN G+N AEA+NF T W+ G+
Sbjct: 263 QEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGK 302
>gi|39653317 jumonji domain containing 2D [Homo sapiens]
Length = 523
Score = 142 bits (357), Expect = 3e-33
Identities = 85/245 (34%), Positives = 117/245 (47%), Gaps = 27/245 (11%)
Query: 318 FEQATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKEFW--RLVNSIEEDVTVEYGA 375
F Q ++ + GE + + P H +L E+++W R+ NS YGA
Sbjct: 86 FTQYHKKKKAMTVGEYRHLANSKKYQTPPHQNFEDL-ERKYWKNRIYNS------PIYGA 138
Query: 376 DIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 435
DI F T WNL + ++ + I G+ P+L
Sbjct: 139 DISGSLFDEN------------------TKQWNLGHLGTIQDLLEKECGVVIEGVNTPYL 180
Query: 436 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPD 495
Y GM + F WH ED YSINYLH GEPKTWY VP + LE + ++L P
Sbjct: 181 YFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGA 240
Query: 496 LLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADW 555
L V L++P L +G+P R Q AGEF++TFP YH+GFN G+N AEA+NF T W
Sbjct: 241 FLRHKVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRW 300
Query: 556 LPAGR 560
+ G+
Sbjct: 301 IDYGK 305
>gi|226442893 jumonji domain containing 2C isoform 3 [Homo sapiens]
Length = 813
Score = 137 bits (346), Expect = 5e-32
Identities = 82/239 (34%), Positives = 125/239 (52%), Gaps = 34/239 (14%)
Query: 326 TLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSG 385
T++ F ++A+S K + P ++ +L E+++W+ + V YGADI+ + G
Sbjct: 95 TVKEFRQLANSGK---YCTPRYLDYEDL-ERKYWKNLTF----VAPIYGADINGSIYDEG 146
Query: 386 FPVSDSKRHLTPEEEEYATSGWNL----NVMPVLEQSVLCHINADISGMKVPWLYVGMVF 441
WN+ V+ V+E+ C I+ I G+ P+LY GM
Sbjct: 147 ------------------VDEWNIARLNTVLDVVEEE--CGIS--IEGVNTPYLYFGMWK 184
Query: 442 SAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLV 501
+ F WH ED YSINYLH+GEPK+WY +P + LE + + P L +
Sbjct: 185 TTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKM 244
Query: 502 TLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 560
TL++P+ L +G+P + Q AGEF+ITFP YH+GFN G+N AE+ NF T W+ G+
Sbjct: 245 TLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGK 303
>gi|169203160 PREDICTED: hypothetical protein [Homo sapiens]
Length = 638
Score = 137 bits (346), Expect = 5e-32
Identities = 68/160 (42%), Positives = 91/160 (56%)
Query: 401 EYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLH 460
E +T WNL + + + I G+ P+LY GM + F WH ED YSINYLH
Sbjct: 143 EESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLH 202
Query: 461 WGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTN 520
+GEPKTWY VP + LE + ++L P L V L++P L +G+P R
Sbjct: 203 FGEPKTWYVVPPEHGQRLECLARELFPGNSRGCEGFLRHKVALISPTVLKKNGIPFNRMT 262
Query: 521 QCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 560
Q AGEF++TFP YH+GFN G+N AEA+NF T W+ G+
Sbjct: 263 QEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGK 302
>gi|169203656 PREDICTED: hypothetical protein [Homo sapiens]
Length = 638
Score = 137 bits (346), Expect = 5e-32
Identities = 68/160 (42%), Positives = 91/160 (56%)
Query: 401 EYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLH 460
E +T WNL + + + I G+ P+LY GM + F WH ED YSINYLH
Sbjct: 143 EESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLH 202
Query: 461 WGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTN 520
+GEPKTWY VP + LE + ++L P L V L++P L +G+P R
Sbjct: 203 FGEPKTWYVVPPEHGQRLECLARELFPGNSRGCEGFLRHKVALISPTVLKKNGIPFNRMT 262
Query: 521 QCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 560
Q AGEF++TFP YH+GFN G+N AEA+NF T W+ G+
Sbjct: 263 QEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGK 302
>gi|169202387 PREDICTED: hypothetical protein [Homo sapiens]
Length = 638
Score = 137 bits (346), Expect = 5e-32
Identities = 68/160 (42%), Positives = 91/160 (56%)
Query: 401 EYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLH 460
E +T WNL + + + I G+ P+LY GM + F WH ED YSINYLH
Sbjct: 143 EESTKQWNLGHLGTILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLH 202
Query: 461 WGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTN 520
+GEPKTWY VP + LE + ++L P L V L++P L +G+P R
Sbjct: 203 FGEPKTWYVVPPEHGQRLECLARELFPGNSRGCEGFLRHKVALISPTVLKKNGIPFNRMT 262
Query: 521 QCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 560
Q AGEF++TFP YH+GFN G+N AEA+NF T W+ G+
Sbjct: 263 QEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGK 302
>gi|226442897 jumonji domain containing 2C isoform 4 [Homo sapiens]
Length = 835
Score = 137 bits (346), Expect = 5e-32
Identities = 82/239 (34%), Positives = 125/239 (52%), Gaps = 34/239 (14%)
Query: 326 TLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSG 385
T++ F ++A+S K + P ++ +L E+++W+ + V YGADI+ + G
Sbjct: 117 TVKEFRQLANSGK---YCTPRYLDYEDL-ERKYWKNLTF----VAPIYGADINGSIYDEG 168
Query: 386 FPVSDSKRHLTPEEEEYATSGWNL----NVMPVLEQSVLCHINADISGMKVPWLYVGMVF 441
WN+ V+ V+E+ C I+ I G+ P+LY GM
Sbjct: 169 ------------------VDEWNIARLNTVLDVVEEE--CGIS--IEGVNTPYLYFGMWK 206
Query: 442 SAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLV 501
+ F WH ED YSINYLH+GEPK+WY +P + LE + + P L +
Sbjct: 207 TTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKM 266
Query: 502 TLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 560
TL++P+ L +G+P + Q AGEF+ITFP YH+GFN G+N AE+ NF T W+ G+
Sbjct: 267 TLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGK 325
>gi|226442889 jumonji domain containing 2C isoform 2 [Homo sapiens]
Length = 1047
Score = 137 bits (346), Expect = 5e-32
Identities = 82/239 (34%), Positives = 125/239 (52%), Gaps = 34/239 (14%)
Query: 326 TLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSG 385
T++ F ++A+S K + P ++ +L E+++W+ + V YGADI+ + G
Sbjct: 95 TVKEFRQLANSGK---YCTPRYLDYEDL-ERKYWKNLTF----VAPIYGADINGSIYDEG 146
Query: 386 FPVSDSKRHLTPEEEEYATSGWNL----NVMPVLEQSVLCHINADISGMKVPWLYVGMVF 441
WN+ V+ V+E+ C I+ I G+ P+LY GM
Sbjct: 147 ------------------VDEWNIARLNTVLDVVEEE--CGIS--IEGVNTPYLYFGMWK 184
Query: 442 SAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLV 501
+ F WH ED YSINYLH+GEPK+WY +P + LE + + P L +
Sbjct: 185 TTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKM 244
Query: 502 TLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 560
TL++P+ L +G+P + Q AGEF+ITFP YH+GFN G+N AE+ NF T W+ G+
Sbjct: 245 TLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGK 303
>gi|109255247 jumonji domain containing 2C isoform 1 [Homo sapiens]
Length = 1056
Score = 137 bits (346), Expect = 5e-32
Identities = 82/239 (34%), Positives = 125/239 (52%), Gaps = 34/239 (14%)
Query: 326 TLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADIHSKEFGSG 385
T++ F ++A+S K + P ++ +L E+++W+ + V YGADI+ + G
Sbjct: 95 TVKEFRQLANSGK---YCTPRYLDYEDL-ERKYWKNLTF----VAPIYGADINGSIYDEG 146
Query: 386 FPVSDSKRHLTPEEEEYATSGWNL----NVMPVLEQSVLCHINADISGMKVPWLYVGMVF 441
WN+ V+ V+E+ C I+ I G+ P+LY GM
Sbjct: 147 ------------------VDEWNIARLNTVLDVVEEE--CGIS--IEGVNTPYLYFGMWK 184
Query: 442 SAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLV 501
+ F WH ED YSINYLH+GEPK+WY +P + LE + + P L +
Sbjct: 185 TTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFLRHKM 244
Query: 502 TLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGR 560
TL++P+ L +G+P + Q AGEF+ITFP YH+GFN G+N AE+ NF T W+ G+
Sbjct: 245 TLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGK 303
>gi|98986459 jumonji domain containing 2A [Homo sapiens]
Length = 1064
Score = 137 bits (345), Expect = 7e-32
Identities = 66/157 (42%), Positives = 90/157 (57%)
Query: 407 WNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKT 466
WN+ + + V I G+ P+LY GM ++F WH ED YSINYLH+GEPK+
Sbjct: 148 WNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKS 207
Query: 467 WYGVPSLAAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEF 526
WY VP + LE + K P S L +TL++P L +G+P + Q AGEF
Sbjct: 208 WYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEF 267
Query: 527 VITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCI 563
+ITFP YH+GFN G+N AE+ NF T W+ G+Q +
Sbjct: 268 MITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAV 304
>gi|45504380 jumonji domain containing 2B [Homo sapiens]
Length = 1096
Score = 132 bits (333), Expect = 2e-30
Identities = 81/243 (33%), Positives = 116/243 (47%), Gaps = 23/243 (9%)
Query: 318 FEQATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGADI 377
F Q + + GE ++ + P H +L E+++W+ + V+ YGADI
Sbjct: 83 FTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDL-ERKYWKNLTF----VSPIYGADI 137
Query: 378 HSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYV 437
SG D + WN+ + + V I G+ P+LY
Sbjct: 138 ------SGSLYDDD------------VAQWNIGSLRTILDMVERECGTIIEGVNTPYLYF 179
Query: 438 GMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKKLTPELFDSQPDLL 497
GM + F WH ED YSINYLH+GEPK+WY +P + LE + P L
Sbjct: 180 GMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFL 239
Query: 498 HQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLP 557
+TL++P L +G+P R Q AGEF+ITFP YH+GFN G+N AE+ NF T W+
Sbjct: 240 RHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWID 299
Query: 558 AGR 560
G+
Sbjct: 300 YGK 302
>gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo
sapiens]
Length = 1483
Score = 73.2 bits (178), Expect = 2e-12
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 25/167 (14%)
Query: 182 GLMAKDKTLRKKDKEGPECPPTVVVKEELGGDVKVESTSPKTFLESKEELSHSP------ 235
G MA + RK E V ++++ + KV S K +E + S
Sbjct: 1111 GFMAPKQKRRKLQSEDSAKTEEVDEEKKMVEEAKVASALEKWKTAIREAQTFSRMHVLLG 1170
Query: 236 --EPCTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPE 293
+ C K M E+ C++C + EDDKL+LCD C+ +H+FCL P L E
Sbjct: 1171 MLDACIKWDMSA----------ENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYE 1220
Query: 294 IPKGVWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKAD 340
+P G W+CP C A +R R YT +S E ++ ++D
Sbjct: 1221 VPDGEWQCPACQPATARR-------NSRGRNYTEESASEDSEDDESD 1260
>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
sapiens]
Length = 1912
Score = 70.1 bits (170), Expect = 1e-11
Identities = 57/217 (26%), Positives = 81/217 (37%), Gaps = 38/217 (17%)
Query: 129 PLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQIYGAGPKMMGLGLMAKDK 188
P + V P K G +KR + E + D+E + + + Y ++ K
Sbjct: 286 PKPKKVAPLKIKLGGFGSKRKRSSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKK 345
Query: 189 TLRKKDKEGPECPPTVVVKEEL-----------GGDVKVESTSPKTF--------LESKE 229
K K+ E T V E GG++ + T P+ + +E
Sbjct: 346 LRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAP 405
Query: 230 ELSHSPEPCTKMTMRLRRNHSNAQFIESY----------------VCRMCSRGDEDDKLL 273
E S C K ++ N++ E CR+C G E LL
Sbjct: 406 EGKWSCPHCEKEGIQWEAKEDNSEGEEILEEVGGDLEEEDDHHMEFCRVCKDGGE---LL 462
Query: 274 LCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECK 310
CD C +YHI CL PPLPEIP G W CP+C K
Sbjct: 463 CCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALK 499
>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
Length = 1648
Score = 69.7 bits (169), Expect = 2e-11
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 260 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKC 304
C +C R D +D+LLLCDGCD YH+ CL PPL E+P W CP+C
Sbjct: 186 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPEC 230
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 66.6 bits (161), Expect = 2e-10
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 255 IESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCV 305
+E VC +C + + +LLLCD CD +YH +CL PPL +PKG W+C CV
Sbjct: 1425 VECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCV 1475
Score = 62.4 bits (150), Expect = 3e-09
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 247 RNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKC 304
R + Q E VC+ C + D K+L+C+ CD YH FCL PP+ E+P W+C C
Sbjct: 263 RKRAGWQCPECKVCQACRKPGNDSKMLVCETCDKGYHTFCLKPPMEELPAHSWKCKAC 320
Score = 42.4 bits (98), Expect = 0.003
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 252 AQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKC-VMAECK 310
A ++E C +C E L C C +YH CL L + W+CP+C V C+
Sbjct: 221 AAYLEEARCAVCEGPGELCDLFFCTSCGHHYHGACLDTALTARKRAGWQCPECKVCQACR 280
Query: 311 RP 312
+P
Sbjct: 281 KP 282
Score = 35.0 bits (79), Expect = 0.50
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 259 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIP--KGVWRCPKCVMAE 308
VC RG E LL C C YH +C+ + ++ KG WRC +C++ E
Sbjct: 1382 VCGSFGRGAEGH-LLACSQCSQCYHPYCVNSKITKVMLLKG-WRCVECIVCE 1431
>gi|205830434 D4, zinc and double PHD fingers family 1 isoform c
[Homo sapiens]
Length = 332
Score = 65.9 bits (159), Expect = 3e-10
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 253 QFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCV 305
Q IE C +C + DD+LL CD CD YH++CL PP+ E P+G W C C+
Sbjct: 266 QCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 318
>gi|205830430 D4, zinc and double PHD fingers family 1 isoform a
[Homo sapiens]
Length = 414
Score = 65.9 bits (159), Expect = 3e-10
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 253 QFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCV 305
Q IE C +C + DD+LL CD CD YH++CL PP+ E P+G W C C+
Sbjct: 348 QCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLCL 400
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 65.5 bits (158), Expect = 3e-10
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 255 IESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCV 305
+E VC C + + +LLLCD CD +YH +CL PPL +PKG W+C CV
Sbjct: 1005 LECTVCEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCV 1055
Score = 62.0 bits (149), Expect = 4e-09
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 256 ESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKC-VMAEC 309
E VC+ C + ED K+L+CD CD YH FCL P + +P W+C C + EC
Sbjct: 387 ECKVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRICIEC 441
Score = 36.6 bits (83), Expect = 0.17
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 260 CRMC-SRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKC-VMAECKRPPE 314
C +C S GD D+ C C +YH CL + + + W+CP+C V CK+ E
Sbjct: 344 CAVCDSPGDLLDQFF-CTTCGQHYHGMCLDIAVTPLKRAGWQCPECKVCQNCKQSGE 399
Score = 32.7 bits (73), Expect = 2.5
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 259 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEI--PKGVWRCPKCVMAE 308
VC +G E +LL C C YH +C+ + ++ KG WRC +C + E
Sbjct: 962 VCGSFGQGAEG-RLLACSQCGQCYHPYCVSIKITKVVLSKG-WRCLECTVCE 1011
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,311,431
Number of Sequences: 37866
Number of extensions: 3062138
Number of successful extensions: 11123
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 163
Number of HSP's that attempted gapping in prelim test: 10314
Number of HSP's gapped (non-prelim): 896
length of query: 1379
length of database: 18,247,518
effective HSP length: 115
effective length of query: 1264
effective length of database: 13,892,928
effective search space: 17560660992
effective search space used: 17560660992
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.