KDM4D 27191

Name: KDM4D	Sequence: fasta or formatted (523aa)		NCBI GI: 39653317
Description: jumonji domain containing 2D		Referenced in: Histones, Related Proteins, and Modifying Enzymes PHD Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 45 3 C cysteine 2.1 11 1 D aspartate 3.1 16 1 E glutamate 6.1 32 2 F phenylalanine 3.4 18 1 G glycine 7.1 37 1 H histidine 3.6 19 1 I isoleucine 4.2 22 2 K lysine 5.7 30 4 L leucine 7.3 38 2 M methionine 2.5 13 1 N asparagine 3.8 20 1 P proline 8.6 45 2 Q glutamine 4.6 24 2 R arginine 6.5 34 2 S serine 6.9 36 2 T threonine 5.9 31 2 V valine 4.4 23 2 W tryptophan 2.1 11 1 Y tyrosine 3.4 18 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 jumonji domain containing 2D LOC100129053 0.637 PREDICTED: hypothetical protein LOC100129053 0.637 PREDICTED: hypothetical protein LOC100129053 0.637 PREDICTED: hypothetical protein LOC390245 0.600 PREDICTED: hypothetical protein LOC390245 0.599 PREDICTED: hypothetical protein LOC390245 0.599 PREDICTED: hypothetical protein KDM4B 0.508 jumonji domain containing 2B KDM4C 0.462 jumonji domain containing 2C isoform 3 KDM4C 0.462 jumonji domain containing 2C isoform 4 KDM4C 0.462 jumonji domain containing 2C isoform 2 KDM4C 0.462 jumonji domain containing 2C isoform 1 KDM4A 0.460 jumonji domain containing 2A KDM5A 0.120 retinoblastoma binding protein 2 isoform 1 KDM5A 0.120 retinoblastoma binding protein 2 isoform 2 KDM5D 0.109 jumonji, AT rich interactive domain 1D isoform 3 [H... KDM5D 0.109 jumonji, AT rich interactive domain 1D isoform 2 [Ho... KDM5C 0.109 jumonji, AT rich interactive domain 1C isoform 2 [H... KDM5C 0.109 jumonji, AT rich interactive domain 1C isoform 1 [H... KDM5D 0.106 jumonji, AT rich interactive domain 1D isoform 1 [H... KDM5B 0.105 jumonji, AT rich interactive domain 1B LOC100133760 0.105 PREDICTED: similar to Jumonji, AT rich interactive ... JARID2 0.055 jumonji, AT rich interactive domain 2 protein LOC100130837 0.017 PREDICTED: hypothetical protein LOC100130837 0.017 PREDICTED: hypothetical protein SAMD1 0.015 sterile alpha motif domain containing 1 PCLO 0.013 piccolo isoform 2 PCLO 0.013 piccolo isoform 1 SLC2A4RG 0.013 SLC2A4 regulator LOC100290780 0.012 PREDICTED: hypothetical protein XP_002348295 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.