Search of human proteins with 226371764

Search of human proteins with 226371764

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|226371764 transcription factor 7-like 2 isoform 1 [Homo
sapiens]
         (602 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]  1243   0.0  
gi|226371625 transcription factor 7-like 2 isoform 5 [Homo sapiens]  1167   0.0  
gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens]  1156   0.0  
gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens]   853   0.0  
gi|226371623 transcription factor 7-like 2 isoform 4 [Homo sapiens]   840   0.0  
gi|226371620 transcription factor 7-like 2 isoform 3 [Homo sapiens]   831   0.0  
gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens]         658   0.0  
gi|7705917 lymphoid enhancer-binding factor 1 isoform 1 [Homo sa...   433   e-121
gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo ...   379   e-105
gi|195222732 lymphoid enhancer-binding factor 1 isoform 2 [Homo ...   379   e-105
gi|198442849 transcription factor 7 (T-cell specific, HMG-box) 5...   309   4e-84
gi|42518080 transcription factor 7 (T-cell specific, HMG-box) is...   278   1e-74
gi|42714657 transcription factor 7 (T-cell specific, HMG-box) is...   269   5e-72
gi|42518074 transcription factor 7 (T-cell specific, HMG-box) is...   236   3e-62
gi|198442851 transcription factor 7 (T-cell specific, HMG-box) 6...   232   6e-61
gi|42518078 transcription factor 7 (T-cell specific, HMG-box) is...   230   3e-60
gi|47419938 transcription factor 7 (T-cell specific, HMG-box) is...   230   3e-60
gi|112421108 capicua homolog [Homo sapiens]                            79   2e-14
gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo...    71   2e-12
gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Hom...    71   2e-12
gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Hom...    66   1e-10
gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Hom...    66   1e-10
gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo...    66   1e-10
gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo...    66   1e-10
gi|41406089 SRY-box 13 [Homo sapiens]                                  64   3e-10
gi|11967991 SRY-box 17 [Homo sapiens]                                  62   2e-09
gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo...    61   3e-09
gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo...    61   3e-09
gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo...    61   3e-09
gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]        59   1e-08

>gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]
          Length = 602

 Score = 1243 bits (3217), Expect = 0.0
 Identities = 602/602 (100%), Positives = 602/602 (100%)

Query: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
           MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS
Sbjct: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60

Query: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
           DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS
Sbjct: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120

Query: 121 LSPTARTLHFQSGSTHYSAYKTIEHQIAVQYLQMKWPLLDVQAGSLQSRQALKDARSPSP 180
           LSPTARTLHFQSGSTHYSAYKTIEHQIAVQYLQMKWPLLDVQAGSLQSRQALKDARSPSP
Sbjct: 121 LSPTARTLHFQSGSTHYSAYKTIEHQIAVQYLQMKWPLLDVQAGSLQSRQALKDARSPSP 180

Query: 181 AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS 240
           AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS
Sbjct: 181 AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS 240

Query: 241 PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP 300
           PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP
Sbjct: 241 PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP 300

Query: 301 HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY 360
           HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY
Sbjct: 301 HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY 360

Query: 361 MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR 420
           MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR
Sbjct: 361 MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR 420

Query: 421 DNYGKKKKRKRDKQPGETNDANTPKKCRALFGLDRQTLWCKPCRRKKKCVRYIQGEGSCL 480
           DNYGKKKKRKRDKQPGETNDANTPKKCRALFGLDRQTLWCKPCRRKKKCVRYIQGEGSCL
Sbjct: 421 DNYGKKKKRKRDKQPGETNDANTPKKCRALFGLDRQTLWCKPCRRKKKCVRYIQGEGSCL 480

Query: 481 SPPSSDGSLLDSPPPSPNLLGSPPRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLL 540
           SPPSSDGSLLDSPPPSPNLLGSPPRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLL
Sbjct: 481 SPPSSDGSLLDSPPPSPNLLGSPPRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLL 540

Query: 541 AEATHKASALCPNGALDLPPAALQPAAPSSSIAQPSTSSLHSHSSLAGTQPQPLSLVTKS 600
           AEATHKASALCPNGALDLPPAALQPAAPSSSIAQPSTSSLHSHSSLAGTQPQPLSLVTKS
Sbjct: 541 AEATHKASALCPNGALDLPPAALQPAAPSSSIAQPSTSSLHSHSSLAGTQPQPLSLVTKS 600

Query: 601 LE 602
           LE
Sbjct: 601 LE 602


>gi|226371625 transcription factor 7-like 2 isoform 5 [Homo sapiens]
          Length = 579

 Score = 1167 bits (3018), Expect = 0.0
 Identities = 571/602 (94%), Positives = 573/602 (95%), Gaps = 23/602 (3%)

Query: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
           MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS
Sbjct: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60

Query: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
           DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS
Sbjct: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120

Query: 121 LSPTARTLHFQSGSTHYSAYKTIEHQIAVQYLQMKWPLLDVQAGSLQSRQALKDARSPSP 180
           LSPTART                       YLQMKWPLLDVQAGSLQSRQALKDARSPSP
Sbjct: 121 LSPTART-----------------------YLQMKWPLLDVQAGSLQSRQALKDARSPSP 157

Query: 181 AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS 240
           AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS
Sbjct: 158 AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS 217

Query: 241 PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP 300
           PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP
Sbjct: 218 PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP 277

Query: 301 HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY 360
           HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY
Sbjct: 278 HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY 337

Query: 361 MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR 420
           MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR
Sbjct: 338 MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR 397

Query: 421 DNYGKKKKRKRDKQPGETNDANTPKKCRALFGLDRQTLWCKPCRRKKKCVRYIQGEGSCL 480
           DNYGKKKKRKRDKQPGETND + PKKCRA FGLD+Q  WC PCRRKKKCVRYIQGEGSCL
Sbjct: 398 DNYGKKKKRKRDKQPGETNDLSAPKKCRARFGLDQQNNWCGPCRRKKKCVRYIQGEGSCL 457

Query: 481 SPPSSDGSLLDSPPPSPNLLGSPPRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLL 540
           SPPSSDGSLLDSPPPSPNLLGSPPRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLL
Sbjct: 458 SPPSSDGSLLDSPPPSPNLLGSPPRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLL 517

Query: 541 AEATHKASALCPNGALDLPPAALQPAAPSSSIAQPSTSSLHSHSSLAGTQPQPLSLVTKS 600
           AEATHKASALCPNGALDLPPAALQPAAPSSSIAQPSTSSLHSHSSLAGTQPQPLSLVTKS
Sbjct: 518 AEATHKASALCPNGALDLPPAALQPAAPSSSIAQPSTSSLHSHSSLAGTQPQPLSLVTKS 577

Query: 601 LE 602
           LE
Sbjct: 578 LE 579


>gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens]
          Length = 596

 Score = 1156 bits (2990), Expect = 0.0
 Identities = 571/619 (92%), Positives = 573/619 (92%), Gaps = 40/619 (6%)

Query: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
           MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS
Sbjct: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60

Query: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
           DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS
Sbjct: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120

Query: 121 LSPTARTLHFQSGSTHYSAYKTIEHQIAVQYLQMKWPLLDVQAGSLQSRQALKDARSPSP 180
           LSPTART                       YLQMKWPLLDVQAGSLQSRQALKDARSPSP
Sbjct: 121 LSPTART-----------------------YLQMKWPLLDVQAGSLQSRQALKDARSPSP 157

Query: 181 AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS 240
           AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS
Sbjct: 158 AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS 217

Query: 241 PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP 300
           PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP
Sbjct: 218 PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP 277

Query: 301 HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY 360
           HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY
Sbjct: 278 HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY 337

Query: 361 MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR 420
           MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR
Sbjct: 338 MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR 397

Query: 421 DNYGKKKKRKRDKQPGETN-----------------DANTPKKCRALFGLDRQTLWCKPC 463
           DNYGKKKKRKRDKQPGETN                 D + PKKCRA FGLD+Q  WC PC
Sbjct: 398 DNYGKKKKRKRDKQPGETNEHSECFLNPCLSLPPITDLSAPKKCRARFGLDQQNNWCGPC 457

Query: 464 RRKKKCVRYIQGEGSCLSPPSSDGSLLDSPPPSPNLLGSPPRDAKSQTEQTQPLSLSLKP 523
           RRKKKCVRYIQGEGSCLSPPSSDGSLLDSPPPSPNLLGSPPRDAKSQTEQTQPLSLSLKP
Sbjct: 458 RRKKKCVRYIQGEGSCLSPPSSDGSLLDSPPPSPNLLGSPPRDAKSQTEQTQPLSLSLKP 517

Query: 524 DPLAHLSMMPPPPALLLAEATHKASALCPNGALDLPPAALQPAAPSSSIAQPSTSSLHSH 583
           DPLAHLSMMPPPPALLLAEATHKASALCPNGALDLPPAALQPAAPSSSIAQPSTSSLHSH
Sbjct: 518 DPLAHLSMMPPPPALLLAEATHKASALCPNGALDLPPAALQPAAPSSSIAQPSTSSLHSH 577

Query: 584 SSLAGTQPQPLSLVTKSLE 602
           SSLAGTQPQPLSLVTKSLE
Sbjct: 578 SSLAGTQPQPLSLVTKSLE 596


>gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens]
          Length = 442

 Score =  853 bits (2204), Expect = 0.0
 Identities = 416/439 (94%), Positives = 416/439 (94%), Gaps = 23/439 (5%)

Query: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
           MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS
Sbjct: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60

Query: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
           DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS
Sbjct: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120

Query: 121 LSPTARTLHFQSGSTHYSAYKTIEHQIAVQYLQMKWPLLDVQAGSLQSRQALKDARSPSP 180
           LSPTART                       YLQMKWPLLDVQAGSLQSRQALKDARSPSP
Sbjct: 121 LSPTART-----------------------YLQMKWPLLDVQAGSLQSRQALKDARSPSP 157

Query: 181 AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS 240
           AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS
Sbjct: 158 AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS 217

Query: 241 PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP 300
           PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP
Sbjct: 218 PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP 277

Query: 301 HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY 360
           HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY
Sbjct: 278 HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY 337

Query: 361 MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR 420
           MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR
Sbjct: 338 MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR 397

Query: 421 DNYGKKKKRKRDKQPGETN 439
           DNYGKKKKRKRDKQPGETN
Sbjct: 398 DNYGKKKKRKRDKQPGETN 416


>gi|226371623 transcription factor 7-like 2 isoform 4 [Homo sapiens]
          Length = 455

 Score =  840 bits (2171), Expect = 0.0
 Identities = 412/440 (93%), Positives = 413/440 (93%), Gaps = 27/440 (6%)

Query: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
           MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS
Sbjct: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60

Query: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
           DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS
Sbjct: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120

Query: 121 LSPTARTLHFQSGSTHYSAYKTIEHQIAVQYLQMKWPLLDVQAGSLQSRQALKDARSPSP 180
           LSPTART                       YLQMKWPLLDVQAGSLQSRQALKDARSPSP
Sbjct: 121 LSPTART-----------------------YLQMKWPLLDVQAGSLQSRQALKDARSPSP 157

Query: 181 AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS 240
           AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS
Sbjct: 158 AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS 217

Query: 241 PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP 300
           PYYPLSPGTVGQIPHPLGW    QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP
Sbjct: 218 PYYPLSPGTVGQIPHPLGW----QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP 273

Query: 301 HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY 360
           HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY
Sbjct: 274 HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY 333

Query: 361 MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR 420
           MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR
Sbjct: 334 MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR 393

Query: 421 DNYGKKKKRKRDKQPGETND 440
           DNYGKKKKRKRDKQPGETN+
Sbjct: 394 DNYGKKKKRKRDKQPGETNE 413


>gi|226371620 transcription factor 7-like 2 isoform 3 [Homo sapiens]
          Length = 489

 Score =  831 bits (2146), Expect = 0.0
 Identities = 416/486 (85%), Positives = 416/486 (85%), Gaps = 70/486 (14%)

Query: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
           MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS
Sbjct: 1   MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60

Query: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
           DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS
Sbjct: 61  DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120

Query: 121 LSPTARTLHFQSGSTHYSAYKTIEHQIAVQYLQMKWPLLDVQAGSLQSRQALKDARSPSP 180
           LSPTART                       YLQMKWPLLDVQAGSLQSRQALKDARSPSP
Sbjct: 121 LSPTART-----------------------YLQMKWPLLDVQAGSLQSRQALKDARSPSP 157

Query: 181 AHIV-----------------------------------------------SNKVPVVQH 193
           AHIV                                               SNKVPVVQH
Sbjct: 158 AHIVSPLPCCTQGHDCQHFYPPSDFTVSTQVFRDMKRSHSLQKVGEPWCIESNKVPVVQH 217

Query: 194 PHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQI 253
           PHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQI
Sbjct: 218 PHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQI 277

Query: 254 PHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPA 313
           PHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPA
Sbjct: 278 PHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPA 337

Query: 314 IVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECT 373
           IVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECT
Sbjct: 338 IVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECT 397

Query: 374 LKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDK 433
           LKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDK
Sbjct: 398 LKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDK 457

Query: 434 QPGETN 439
           QPGETN
Sbjct: 458 QPGETN 463


>gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens]
          Length = 588

 Score =  658 bits (1697), Expect = 0.0
 Identities = 359/608 (59%), Positives = 426/608 (70%), Gaps = 62/608 (10%)

Query: 7   GGGDDLGANDELISFKDEG-EQEEKSSENSSAERDLADVKSSLVNESETNQNSSSDSEAE 65
           GGGDDLGANDELI F+DEG E++E SS+++SA+RDL +VKSSLVNESE NQ+SSSDSEAE
Sbjct: 27  GGGDDLGANDELIPFQDEGGEEQEPSSDSASAQRDLDEVKSSLVNESE-NQSSSSDSEAE 85

Query: 66  RRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGSLSPT- 124
           RRP P  ++F+ K R+   E  + QD   FKGPPYPGYPF+MIPDL+SPYL NG LSP  
Sbjct: 86  RRPQPVRDTFQ-KPRDYFAEVRRPQDSAFFKGPPYPGYPFLMIPDLSSPYLSNGPLSPGG 144

Query: 125 ARTLHFQSGSTHYSAYKTIEHQIAVQYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIV 184
           ART                       YLQMKWPLLDV + +      +KD RSPSPAH+ 
Sbjct: 145 ART-----------------------YLQMKWPLLDVPSSA-----TVKDTRSPSPAHL- 175

Query: 185 SNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYP 244
           SNKVPVVQHPHH+HPLTPLITYSN+HF+PG+PP HL  ++DPKTGIPRPPHP ++SPYYP
Sbjct: 176 SNKVPVVQHPHHMHPLTPLITYSNDHFSPGSPPTHLSPEIDPKTGIPRPPHPSELSPYYP 235

Query: 245 LSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMS-----RFPPHMVP 299
           LSPG VGQIPHPLGWLVPQQGQP+Y +  GGFRHPYP AL +NASMS     RF PHMV 
Sbjct: 236 LSPGAVGQIPHPLGWLVPQQGQPMYSLPPGGFRHPYP-ALAMNASMSSLVSSRFSPHMVA 294

Query: 300 PHHT-LHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFM 358
           P H  L T+GIPHPAIV+P VKQE +   +    S K   + K+EE+KKPH+KKPLNAFM
Sbjct: 295 PAHPGLPTSGIPHPAIVSPIVKQEPAPPSLSPAVSVKSPVTVKKEEEKKPHVKKPLNAFM 354

Query: 359 LYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWS 418
           LYMKEMRAKVVAECTLKESAAINQILGR+WH LSREEQAKYYELARKERQLH QLYP WS
Sbjct: 355 LYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQAKYYELARKERQLHSQLYPTWS 414

Query: 419 ARDNYGKKKKRKRDKQPGETNDANTPKKCRALFGLDRQTLWCKPCRRKKKCVRYIQGEGS 478
           ARDNYGKKKKRKR+KQ  +T      ++                 + KK CV+Y+  E  
Sbjct: 415 ARDNYGKKKKRKREKQLSQTQSQQQVQEAEGALA----------SKSKKPCVQYLPPEKP 464

Query: 479 CLSPPSSDGSLLDSPPPSPNLLGSPPRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPAL 538
           C SP SS GS+LDSP      L SP   A + +EQ QPLSL+ KP+  A L++     A 
Sbjct: 465 CDSPASSHGSMLDSPATPSAALASPAAPAATHSEQAQPLSLTTKPETRAQLAL--HSAAF 522

Query: 539 LLAEATHKASALCPNGALDLPPAALQP----AAPSSSIAQPST--SSLHSHSSLAGTQPQ 592
           L A+A   +S    +     PP   +P    + P++ +A P +  ++LH+H +L   Q Q
Sbjct: 523 LSAKAAASSSGQMGS----QPPLLSRPLPLGSMPTALLASPPSFPATLHAHQALPVLQAQ 578

Query: 593 PLSLVTKS 600
           PLSLVTKS
Sbjct: 579 PLSLVTKS 586


>gi|7705917 lymphoid enhancer-binding factor 1 isoform 1 [Homo
           sapiens]
          Length = 399

 Score =  433 bits (1114), Expect = e-121
 Identities = 249/445 (55%), Positives = 290/445 (65%), Gaps = 75/445 (16%)

Query: 1   MPQLNGGGGD-----DLGANDELISFKDEGE-QEEK---SSENSSAERDLADVKSSLVNE 51
           MPQL+GGGG      +L A DE+I FKDEG+ Q+EK      +   E DLAD+KSSLVNE
Sbjct: 1   MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60

Query: 52  SETNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLF-KGPPYPGYP-FIMIP 109
           SE    +S+  E  R+     E + DK+RE  ++  K  DGGL+ KGP Y  Y  +IM+P
Sbjct: 61  SEIIP-ASNGHEVARQAQTSQEPYHDKAREHPDDG-KHPDGGLYNKGPSYSSYSGYIMMP 118

Query: 110 DLTS-PYLPNGSLSPTARTLHFQSGSTHYSAYKTIEHQIAVQYLQMKWPLLDVQAGSLQS 168
           ++ + PY+ N                                             GSL  
Sbjct: 119 NMNNDPYMSN---------------------------------------------GSL-- 131

Query: 169 RQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKT 228
                   SP P    SNKVPVVQ  H VHPLTPLITYS+EHF+PG+ P H+P+DV+ K 
Sbjct: 132 --------SP-PIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQ 182

Query: 229 GIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNA 288
           G+ R P  PDI  +YPLSPG VGQI  PLGW    QGQPVYPIT GGFR PYP++L+V+ 
Sbjct: 183 GMSRHPPAPDIPTFYPLSPGGVGQITPPLGW----QGQPVYPIT-GGFRQPYPSSLSVDT 237

Query: 289 SMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKP 348
           SMSRF  HM+P     HTTGIPHPAIVTP VKQE   +D   +H     + +KE+E K+P
Sbjct: 238 SMSRFSHHMIPGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRP 297

Query: 349 HIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQ 408
           HIKKPLNAFMLYMKEMRA VVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQ
Sbjct: 298 HIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQ 357

Query: 409 LHMQLYPGWSARDNYGKKKKRKRDK 433
           LHMQLYPGWSARDNYGKKKKRKR+K
Sbjct: 358 LHMQLYPGWSARDNYGKKKKRKREK 382


>gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo
           sapiens]
          Length = 386

 Score =  379 bits (973), Expect = e-105
 Identities = 227/445 (51%), Positives = 264/445 (59%), Gaps = 103/445 (23%)

Query: 1   MPQLNGGGGD-----DLGANDELISFKDEGE-QEEK---SSENSSAERDLADVKSSLVNE 51
           MPQL+GGGG      +L A DE+I FKDEG+ Q+EK      +   E DLAD+KSSLVNE
Sbjct: 1   MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60

Query: 52  SETNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLF-KGPPYPGYP-FIMIP 109
           SE    +S+  E  R+     E + DK+RE  ++  K  DGGL+ KGP Y  Y  +IM+P
Sbjct: 61  SEIIP-ASNGHEVARQAQTSQEPYHDKAREHPDDG-KHPDGGLYNKGPSYSSYSGYIMMP 118

Query: 110 DLTS-PYLPNGSLSPTARTLHFQSGSTHYSAYKTIEHQIAVQYLQMKWPLLDVQAGSLQS 168
           ++ + PY+ N                                             GSL  
Sbjct: 119 NMNNDPYMSN---------------------------------------------GSL-- 131

Query: 169 RQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKT 228
                   SP P    SNKVPVVQ  H VHPLTPLITYS+EHF+PG+ P H+P+DV+ K 
Sbjct: 132 --------SP-PIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQ 182

Query: 229 GIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNA 288
           G+ R P  PDI  +YPLSPG VGQI  PLGW                             
Sbjct: 183 GMSRHPPAPDIPTFYPLSPGGVGQITPPLGW----------------------------- 213

Query: 289 SMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKP 348
               F  HM+P     HTTGIPHPAIVTP VKQE   +D   +H     + +KE+E K+P
Sbjct: 214 ----FSHHMIPGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRP 269

Query: 349 HIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQ 408
           HIKKPLNAFMLYMKEMRA VVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQ
Sbjct: 270 HIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQ 329

Query: 409 LHMQLYPGWSARDNYGKKKKRKRDK 433
           LHMQLYPGWSARDNYGKKKKRKR+K
Sbjct: 330 LHMQLYPGWSARDNYGKKKKRKREK 354


>gi|195222732 lymphoid enhancer-binding factor 1 isoform 2 [Homo
           sapiens]
          Length = 371

 Score =  379 bits (973), Expect = e-105
 Identities = 227/445 (51%), Positives = 264/445 (59%), Gaps = 103/445 (23%)

Query: 1   MPQLNGGGGD-----DLGANDELISFKDEGE-QEEK---SSENSSAERDLADVKSSLVNE 51
           MPQL+GGGG      +L A DE+I FKDEG+ Q+EK      +   E DLAD+KSSLVNE
Sbjct: 1   MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60

Query: 52  SETNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLF-KGPPYPGYP-FIMIP 109
           SE    +S+  E  R+     E + DK+RE  ++  K  DGGL+ KGP Y  Y  +IM+P
Sbjct: 61  SEIIP-ASNGHEVARQAQTSQEPYHDKAREHPDDG-KHPDGGLYNKGPSYSSYSGYIMMP 118

Query: 110 DLTS-PYLPNGSLSPTARTLHFQSGSTHYSAYKTIEHQIAVQYLQMKWPLLDVQAGSLQS 168
           ++ + PY+ N                                             GSL  
Sbjct: 119 NMNNDPYMSN---------------------------------------------GSL-- 131

Query: 169 RQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKT 228
                   SP P    SNKVPVVQ  H VHPLTPLITYS+EHF+PG+ P H+P+DV+ K 
Sbjct: 132 --------SP-PIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQ 182

Query: 229 GIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNA 288
           G+ R P  PDI  +YPLSPG VGQI  PLGW                             
Sbjct: 183 GMSRHPPAPDIPTFYPLSPGGVGQITPPLGW----------------------------- 213

Query: 289 SMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKP 348
               F  HM+P     HTTGIPHPAIVTP VKQE   +D   +H     + +KE+E K+P
Sbjct: 214 ----FSHHMIPGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRP 269

Query: 349 HIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQ 408
           HIKKPLNAFMLYMKEMRA VVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQ
Sbjct: 270 HIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQ 329

Query: 409 LHMQLYPGWSARDNYGKKKKRKRDK 433
           LHMQLYPGWSARDNYGKKKKRKR+K
Sbjct: 330 LHMQLYPGWSARDNYGKKKKRKREK 354


>gi|198442849 transcription factor 7 (T-cell specific, HMG-box) 5
           [Homo sapiens]
          Length = 366

 Score =  309 bits (792), Expect = 4e-84
 Identities = 179/352 (50%), Positives = 211/352 (59%), Gaps = 52/352 (14%)

Query: 192 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 251
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89

Query: 252 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 311
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118

Query: 312 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 371
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175

Query: 372 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 431
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235

Query: 432 DKQPGETNDANTPKKCRALFGLDRQTLWCKPCRRKKKCVRYIQGEGSCLSPPSSDGSLLD 491
           +K    T D  +PKKCRA FGL++QT WC PCRRKKKC+RY+ GEG C SP  SD S L 
Sbjct: 236 EKHQESTTDPGSPKKCRARFGLNQQTDWCGPCRRKKKCIRYLPGEGRCPSPVPSDDSALG 295

Query: 492 SP-------PPSPNLLGSPPRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPP 536
            P        PS +LL   P +  +   +  P S    P     LS+  P P
Sbjct: 296 CPGSPAPQDSPSYHLLPRFPTELLTSPAEPAPTS----PGLSTALSLPTPGP 343


>gi|42518080 transcription factor 7 (T-cell specific, HMG-box)
           isoform 1 [Homo sapiens]
          Length = 384

 Score =  278 bits (710), Expect = 1e-74
 Identities = 189/445 (42%), Positives = 241/445 (54%), Gaps = 95/445 (21%)

Query: 1   MPQLNGGGG-----DDLGANDELISFKDEGEQEEKSSENSSA--ERDLADVKSSLVNESE 53
           MPQL+ GGG     DDLGA DEL++F+DEGE+++  S +S+A  ERDLA++KSSLVNESE
Sbjct: 1   MPQLDSGGGGAGGGDDLGAPDELLAFQDEGEEQDDKSRDSAAGPERDLAELKSSLVNESE 60

Query: 54  TNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTS 113
               ++  +     P   + +  +      E AA+R                 + PD   
Sbjct: 61  ---GAAGGAGIPGVPGAGAGARGEAEALGREHAAQR-----------------LFPDKLP 100

Query: 114 PYLPNGSLSPTARTLHFQSGSTHYSAYKTIEHQIAVQYLQMKWPLLDVQAGSLQSRQALK 173
             L +G  +P   +  ++   T YSA+  + H                 +G+ Q  Q   
Sbjct: 101 EPLEDGLKAPECTSGMYKE--TVYSAFNLLMHY-------------PPPSGAGQHPQ--- 142

Query: 174 DARSPSPAHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRP 233
               P P    +N+ P        H +  L  Y  EHF   +P P  PAD+  K  + RP
Sbjct: 143 ----PQPPLHKANQPP--------HGVPQLSLY--EHFNSPHPTP-APADISQKQ-VHRP 186

Query: 234 PHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRF 293
              PD+S +Y L+ G++GQ+PH + W                F HP   +L + + +   
Sbjct: 187 LQTPDLSGFYSLTSGSMGQLPHTVSW----------------FTHP---SLMLGSGVPG- 226

Query: 294 PPHMVPPHHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKP 353
                      H   IPHPAIV P+ KQE    D    +     +SK E+E KKP IKKP
Sbjct: 227 -----------HPAAIPHPAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKP 272

Query: 354 LNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQL 413
           LNAFMLYMKEMRAKV+AECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQL
Sbjct: 273 LNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQL 332

Query: 414 YPGWSARDNYGKKKKRKRDKQPGET 438
           YPGWSARDNYGKKK+R R+K    T
Sbjct: 333 YPGWSARDNYGKKKRRSREKHQEST 357


>gi|42714657 transcription factor 7 (T-cell specific, HMG-box)
           isoform 4 [Homo sapiens]
          Length = 268

 Score =  269 bits (688), Expect = 5e-72
 Identities = 149/273 (54%), Positives = 174/273 (63%), Gaps = 41/273 (15%)

Query: 192 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 251
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89

Query: 252 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 311
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118

Query: 312 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 371
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175

Query: 372 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 431
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235

Query: 432 DKQPGETNDANTPKKCRALFGLDRQTLWCKPCR 464
           +K    T D  +PKKCRA FGL++QT WC PCR
Sbjct: 236 EKHQESTTDPGSPKKCRARFGLNQQTDWCGPCR 268


>gi|42518074 transcription factor 7 (T-cell specific, HMG-box)
           isoform 3 [Homo sapiens]
          Length = 269

 Score =  236 bits (603), Expect = 3e-62
 Identities = 134/257 (52%), Positives = 160/257 (62%), Gaps = 41/257 (15%)

Query: 192 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 251
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89

Query: 252 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 311
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118

Query: 312 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 371
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175

Query: 372 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 431
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235

Query: 432 DKQPGETNDANTPKKCR 448
           +K    T + N P++ +
Sbjct: 236 EKHQESTTETNWPRELK 252


>gi|198442851 transcription factor 7 (T-cell specific, HMG-box) 6
           [Homo sapiens]
          Length = 250

 Score =  232 bits (592), Expect = 6e-61
 Identities = 133/249 (53%), Positives = 155/249 (62%), Gaps = 41/249 (16%)

Query: 192 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 251
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89

Query: 252 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 311
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118

Query: 312 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 371
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175

Query: 372 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 431
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235

Query: 432 DKQPGETND 440
           +K    T D
Sbjct: 236 EKHQESTTD 244


>gi|42518078 transcription factor 7 (T-cell specific, HMG-box)
           isoform 2 [Homo sapiens]
          Length = 269

 Score =  230 bits (586), Expect = 3e-60
 Identities = 132/247 (53%), Positives = 154/247 (62%), Gaps = 41/247 (16%)

Query: 192 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 251
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89

Query: 252 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 311
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118

Query: 312 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 371
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175

Query: 372 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 431
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235

Query: 432 DKQPGET 438
           +K    T
Sbjct: 236 EKHQEST 242


>gi|47419938 transcription factor 7 (T-cell specific, HMG-box)
           isoform 2 [Homo sapiens]
          Length = 269

 Score =  230 bits (586), Expect = 3e-60
 Identities = 132/247 (53%), Positives = 154/247 (62%), Gaps = 41/247 (16%)

Query: 192 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 251
           Q PH V  L+       EHF   +P P  PAD+  K  + RP   PD+S +Y L+ G++G
Sbjct: 37  QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89

Query: 252 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 311
           Q+PH + W                F HP   +L + + +              H   IPH
Sbjct: 90  QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118

Query: 312 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 371
           PAIV P+ KQE    D    +     +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175

Query: 372 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 431
           CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235

Query: 432 DKQPGET 438
           +K    T
Sbjct: 236 EKHQEST 242


>gi|112421108 capicua homolog [Homo sapiens]
          Length = 1608

 Score = 78.6 bits (192), Expect = 2e-14
 Identities = 68/253 (26%), Positives = 106/253 (41%), Gaps = 40/253 (15%)

Query: 228 TGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVN 287
           TG   P  PP  +   P SPG     PHPLG +   +G P             PT     
Sbjct: 89  TGSADPERPPGAT--CPESPGPGP--PHPLGVVESGKGPP-------------PTT-EEE 130

Query: 288 ASMSRFPPHMVPPHHTLHTTG---IPHPAIVTPTVKQESSQSDVGSL----HSSKHQDSK 340
           AS     P +     + H      I  P I  P    +     + +L     SS  +D +
Sbjct: 131 ASGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKERDSSSEKDGR 190

Query: 341 KEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYY 400
              +++K HI++P+NAFM++ K  RA V      +++  +++ILG  W+AL  +E+ KY+
Sbjct: 191 SPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYH 250

Query: 401 ELARKERQLHMQLYPGWSARDNYGKKK---------------KRKRDKQPGETNDANTPK 445
           +LA + ++ H + +P W   +   KK                K  R++   ET  A  P 
Sbjct: 251 DLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKETRERSMSETGTAAAPG 310

Query: 446 KCRALFGLDRQTL 458
               L  +  QTL
Sbjct: 311 VSSELLSVAAQTL 323



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 34/113 (30%), Positives = 44/113 (38%), Gaps = 9/113 (7%)

Query: 245  LSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFR-HPYPTALTVNASMSRFPPHMV----- 298
            L+PG VG  P P   L P    P  P+ T  +   P PT+    A  S+ PP +V     
Sbjct: 1065 LAPGQVGVSPVPSPQLPPACAAPGGPVITAFYSGSPAPTSSAPLAQPSQAPPSLVYTVAT 1124

Query: 299  ---PPHHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKP 348
               PP  T+   G P PA  TP        +  GS+  S      +    K P
Sbjct: 1125 STTPPAATILPKGPPAPATATPAPTSPFPSATAGSMTYSLVAPKAQRPSPKAP 1177


>gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo
           sapiens]
          Length = 501

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 14/182 (7%)

Query: 260 LVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHM------VPPHHTLHTTGIPHPA 313
           LV    + +   T+G F  P+   L +  ++   PP         PP   +  T +P   
Sbjct: 235 LVHGSAEVILAPTSGAFG-PHQQDLRIPLTLHTVPPGARIQFQGAPPSELIRLTKVPLTP 293

Query: 314 IVT-------PTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRA 366
           + T       P+VK E+    +  L S          + +  H+K+P+NAFM++ +  R 
Sbjct: 294 VPTKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRP 353

Query: 367 KVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKK 426
            +        +A I+  LG  W+ LS E++  YY+ A+K ++ H + +PGW  +   GK+
Sbjct: 354 ALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKR 413

Query: 427 KK 428
           K+
Sbjct: 414 KR 415


>gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Homo
           sapiens]
          Length = 753

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 14/182 (7%)

Query: 260 LVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHM------VPPHHTLHTTGIPHPA 313
           LV    + +   T+G F  P+   L +  ++   PP         PP   +  T +P   
Sbjct: 235 LVHGSAEVILAPTSGAFG-PHQQDLRIPLTLHTVPPGARIQFQGAPPSELIRLTKVPLTP 293

Query: 314 IVT-------PTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRA 366
           + T       P+VK E+    +  L S          + +  H+K+P+NAFM++ +  R 
Sbjct: 294 VPTKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRP 353

Query: 367 KVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKK 426
            +        +A I+  LG  W+ LS E++  YY+ A+K ++ H + +PGW  +   GK+
Sbjct: 354 ALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKR 413

Query: 427 KK 428
           K+
Sbjct: 414 KR 415


>gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Homo
           sapiens]
          Length = 841

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)

Query: 347 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 406
           +PHIK+P+NAFM++ K+ R K++       ++ I++ILG RW ++S +E+  YYE   + 
Sbjct: 631 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 690

Query: 407 RQLHMQLYPGWSARDNYGKKKKRKR 431
            ++H++ YP      NY  K + KR
Sbjct: 691 SKIHLEKYP------NYKYKPRPKR 709


>gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Homo
           sapiens]
          Length = 801

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)

Query: 347 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 406
           +PHIK+P+NAFM++ K+ R K++       ++ I++ILG RW ++S +E+  YYE   + 
Sbjct: 591 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 650

Query: 407 RQLHMQLYPGWSARDNYGKKKKRKR 431
            ++H++ YP      NY  K + KR
Sbjct: 651 SKIHLEKYP------NYKYKPRPKR 669


>gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo
           sapiens]
          Length = 804

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)

Query: 347 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 406
           +PHIK+P+NAFM++ K+ R K++       ++ I++ILG RW ++S +E+  YYE   + 
Sbjct: 594 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 653

Query: 407 RQLHMQLYPGWSARDNYGKKKKRKR 431
            ++H++ YP      NY  K + KR
Sbjct: 654 SKIHLEKYP------NYKYKPRPKR 672


>gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo
           sapiens]
          Length = 808

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)

Query: 347 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 406
           +PHIK+P+NAFM++ K+ R K++       ++ I++ILG RW ++S +E+  YYE   + 
Sbjct: 598 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 657

Query: 407 RQLHMQLYPGWSARDNYGKKKKRKR 431
            ++H++ YP      NY  K + KR
Sbjct: 658 SKIHLEKYP------NYKYKPRPKR 676


>gi|41406089 SRY-box 13 [Homo sapiens]
          Length = 622

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 72/336 (21%), Positives = 130/336 (38%), Gaps = 65/336 (19%)

Query: 142 TIEHQIAVQYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLT 201
           T+  Q+   + + K    ++ A   + +Q   +        I   +  ++Q  H ++ L 
Sbjct: 161 TLRDQLLTAHSEQK----NMAAMLFEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQ 216

Query: 202 PLITYSNEHFT--PGNPPPHLPADVDPKTGIPRPPHPPDISPY-YPLS-----PGTVGQI 253
             I   N  +   P  PP H P  V P + +  P  P    P  YPL      P  V + 
Sbjct: 217 QQIQQVNMPYVMIPAFPPSHQPLPVTPDSQLALPIQPIPCKPVEYPLQLLHSPPAPVVKR 276

Query: 254 PHPLGWLVPQQGQPVYPIT-TGGFRHPY------PTALTVNASMSRFPPHMVPPH----- 301
           P  +    P Q +P  P+  T   + P         +L +++ + R P H  P       
Sbjct: 277 PGAMATHHPLQ-EPSQPLNLTAKPKAPELPNTSSSPSLKMSSCVPRPPSHGGPTRDLQSS 335

Query: 302 ----------------------------HTLHTTGIPHPAIVTPTVKQESSQS----DVG 329
                                       H+    G P+       +  +SS +    + G
Sbjct: 336 PPSLPLGFLGEGDAVTKAIQDARQLLHSHSGALDGSPNTPFRKDLISLDSSPAKERLEDG 395

Query: 330 SLHS------SKHQDSKKE--EEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAIN 381
            +H       S   D  +   E +   HIK+P+NAFM++ K+ R K++       +++I+
Sbjct: 396 CVHPLEEAMLSCDMDGSRHFPESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSIS 455

Query: 382 QILGRRWHALSREEQAKYYELARKERQLHMQLYPGW 417
           +ILG RW +++ +E+  YYE   +  + H++ YP +
Sbjct: 456 KILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPDY 491


>gi|11967991 SRY-box 17 [Homo sapiens]
          Length = 414

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 69/260 (26%), Positives = 106/260 (40%), Gaps = 35/260 (13%)

Query: 345 KKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELAR 404
           K +  I++P+NAFM++ K+ R ++  +     +A ++++LG+ W AL+  E+  + E A 
Sbjct: 63  KGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAE 122

Query: 405 KERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNDANTPKKCR--------ALFGLDRQ 456
           + R  HMQ +P +  R    K+ KR +  + G  +    P+           A+ GL  Q
Sbjct: 123 RLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGGRVAMDGLGLQ 182

Query: 457 TLWCKPCRRKKKCVRYIQG--EGSCLSPPSSDGSLLDSPPPSPNLLGSPPRDA-KSQTEQ 513
                            QG   G  L PP   G   D        LG+PP D     T  
Sbjct: 183 F--------------PEQGFPAGPPLLPPHMGGHYRDC-----QSLGAPPLDGYPLPTPD 223

Query: 514 TQPLSLSLKPDPLAHLSMMPPP-PA---LLLAEATHKASALCPNGALDLPPAALQPAAPS 569
           T PL   + PDP    + MP   PA      A+ +  A    P      P    +PA PS
Sbjct: 224 TSPLD-GVDPDPAFFAAPMPGDCPAAGTYSYAQVSDYAGPPEPPAGPMHPRLGPEPAGPS 282

Query: 570 SSIAQPSTSSLHSHSSLAGT 589
                   S+LH +    G+
Sbjct: 283 IPGLLAPPSALHVYYGAMGS 302


>gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo
           sapiens]
          Length = 377

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 324 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 383
           S    G   S  +++S+     + PHIK+P+NAFM++ K+ R K++       ++ I++I
Sbjct: 145 SDGSAGVSESRIYRESRGRGSNE-PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI 203

Query: 384 LGRRWHALSREEQAKYYELARKERQLHMQLYPGW 417
           LG RW A++  E+  YYE   +  + H++ YP +
Sbjct: 204 LGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDY 237


>gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo
           sapiens]
          Length = 750

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 324 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 383
           S    G   S  +++S+     + PHIK+P+NAFM++ K+ R K++       ++ I++I
Sbjct: 518 SDGSAGVSESRIYRESRGRGSNE-PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI 576

Query: 384 LGRRWHALSREEQAKYYELARKERQLHMQLYPGW 417
           LG RW A++  E+  YYE   +  + H++ YP +
Sbjct: 577 LGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDY 610


>gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo
           sapiens]
          Length = 763

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 324 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 383
           S    G   S  +++S+     + PHIK+P+NAFM++ K+ R K++       ++ I++I
Sbjct: 531 SDGSAGVSESRIYRESRGRGSNE-PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI 589

Query: 384 LGRRWHALSREEQAKYYELARKERQLHMQLYPGW 417
           LG RW A++  E+  YYE   +  + H++ YP +
Sbjct: 590 LGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDY 623


>gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]
          Length = 446

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 93/412 (22%), Positives = 151/412 (36%), Gaps = 77/412 (18%)

Query: 214 GNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITT 273
           G   P +PAD+  ++ +   P PPD   + P S               P + Q ++ +  
Sbjct: 10  GARSPRVPADL-ARSILISLPFPPDSLAHRPPSSA-------------PTESQGLFTVAA 55

Query: 274 GGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQ------------ 321
                P P A +  A+++   P   P  ++L  T + +P + TPT               
Sbjct: 56  -----PAPGAPSPPATLAHLLP--APAMYSLLETELKNP-VGTPTQAAGTGGPAAPGGAG 107

Query: 322 ESSQSDVGSLHS---SKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESA 378
           +SS +  G  +S   S    S       +  +K+P+NAFM++ +  R K+  E     ++
Sbjct: 108 KSSANAAGGANSGGGSSGGASGGGGGTDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNS 167

Query: 379 AINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDK----- 433
            I++ LG  W  L+  E+  + + A++ R +HM+ YP +  R     K   K+DK     
Sbjct: 168 EISKRLGADWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPS 227

Query: 434 ---QPGETNDANTPKKCRALFGL-----DRQTLWCKPCRRKKKCVRYIQGEGSCLSPPSS 485
               PG    A       A          R   +             +Q +     PPS 
Sbjct: 228 GLLPPGAAAAAAAAAAAAAAASSPVGVGQRLDTYTHVNGWANGAYSLVQEQLGYAQPPS- 286

Query: 486 DGSLLDSPPPSPNLLGSPPRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLLAEATH 545
               + SPPP P L   PP                     L +  MMPP     +  A  
Sbjct: 287 ----MSSPPPPPAL---PPMHRYDMA-------------GLQYSPMMPPGAQSYMNVAAA 326

Query: 546 KASALCPNGALDLPPAAL------QPAAPSSSIAQPSTSSLHSHSSLAGTQP 591
            A+A    G      AA       QPA  +++ A  +  SL    S+  ++P
Sbjct: 327 AAAASGYGGMAPSATAAAAAAYGQQPATAAAAAAAAAAMSLGPMGSVVKSEP 378


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.311    0.129    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,982,047
Number of Sequences: 37866
Number of extensions: 1914818
Number of successful extensions: 12886
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 632
Number of HSP's that attempted gapping in prelim test: 9773
Number of HSP's gapped (non-prelim): 3181
length of query: 602
length of database: 18,247,518
effective HSP length: 108
effective length of query: 494
effective length of database: 14,157,990
effective search space: 6994047060
effective search space used: 6994047060
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.