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Search of human proteins with 226371625
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|226371625 transcription factor 7-like 2 isoform 5 [Homo
sapiens]
(579 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|226371625 transcription factor 7-like 2 isoform 5 [Homo sapiens] 1197 0.0
gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens] 1187 0.0
gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens] 1167 0.0
gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens] 866 0.0
gi|226371623 transcription factor 7-like 2 isoform 4 [Homo sapiens] 854 0.0
gi|226371620 transcription factor 7-like 2 isoform 3 [Homo sapiens] 844 0.0
gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens] 671 0.0
gi|7705917 lymphoid enhancer-binding factor 1 isoform 1 [Homo sa... 451 e-126
gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo ... 396 e-110
gi|195222732 lymphoid enhancer-binding factor 1 isoform 2 [Homo ... 396 e-110
gi|198442849 transcription factor 7 (T-cell specific, HMG-box) 5... 316 4e-86
gi|42518080 transcription factor 7 (T-cell specific, HMG-box) is... 284 2e-76
gi|42714657 transcription factor 7 (T-cell specific, HMG-box) is... 276 5e-74
gi|42518074 transcription factor 7 (T-cell specific, HMG-box) is... 234 2e-61
gi|198442851 transcription factor 7 (T-cell specific, HMG-box) 6... 233 5e-61
gi|42518078 transcription factor 7 (T-cell specific, HMG-box) is... 230 3e-60
gi|47419938 transcription factor 7 (T-cell specific, HMG-box) is... 230 3e-60
gi|112421108 capicua homolog [Homo sapiens] 76 1e-13
gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Hom... 74 4e-13
gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo... 71 2e-12
gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Hom... 66 1e-10
gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Hom... 66 1e-10
gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo... 66 1e-10
gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo... 66 1e-10
gi|11967991 SRY-box 17 [Homo sapiens] 64 3e-10
gi|41406089 SRY-box 13 [Homo sapiens] 63 6e-10
gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens] 63 8e-10
gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo... 61 3e-09
gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo... 61 3e-09
gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo... 61 3e-09
>gi|226371625 transcription factor 7-like 2 isoform 5 [Homo sapiens]
Length = 579
Score = 1197 bits (3098), Expect = 0.0
Identities = 579/579 (100%), Positives = 579/579 (100%)
Query: 1 MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS
Sbjct: 1 MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
Query: 61 DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS
Sbjct: 61 DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
Query: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL 180
LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL
Sbjct: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL 180
Query: 181 ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ 240
ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ
Sbjct: 181 ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ 240
Query: 241 QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES 300
QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES
Sbjct: 241 QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES 300
Query: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360
SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI
Sbjct: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360
Query: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNDLSA 420
LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNDLSA
Sbjct: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNDLSA 420
Query: 421 PKKCRARFGLDQQNNWCGPCRRKKKCVRYIQGEGSCLSPPSSDGSLLDSPPPSPNLLGSP 480
PKKCRARFGLDQQNNWCGPCRRKKKCVRYIQGEGSCLSPPSSDGSLLDSPPPSPNLLGSP
Sbjct: 421 PKKCRARFGLDQQNNWCGPCRRKKKCVRYIQGEGSCLSPPSSDGSLLDSPPPSPNLLGSP 480
Query: 481 PRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLLAEATHKASALCPNGALDLPPAAL 540
PRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLLAEATHKASALCPNGALDLPPAAL
Sbjct: 481 PRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLLAEATHKASALCPNGALDLPPAAL 540
Query: 541 QPAAPSSSIAQPSTSSLHSHSSLAGTQPQPLSLVTKSLE 579
QPAAPSSSIAQPSTSSLHSHSSLAGTQPQPLSLVTKSLE
Sbjct: 541 QPAAPSSSIAQPSTSSLHSHSSLAGTQPQPLSLVTKSLE 579
>gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens]
Length = 596
Score = 1187 bits (3070), Expect = 0.0
Identities = 579/596 (97%), Positives = 579/596 (97%), Gaps = 17/596 (2%)
Query: 1 MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS
Sbjct: 1 MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
Query: 61 DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS
Sbjct: 61 DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
Query: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL 180
LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL
Sbjct: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL 180
Query: 181 ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ 240
ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ
Sbjct: 181 ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ 240
Query: 241 QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES 300
QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES
Sbjct: 241 QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES 300
Query: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360
SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI
Sbjct: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360
Query: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETN---- 416
LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETN
Sbjct: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNEHSE 420
Query: 417 -------------DLSAPKKCRARFGLDQQNNWCGPCRRKKKCVRYIQGEGSCLSPPSSD 463
DLSAPKKCRARFGLDQQNNWCGPCRRKKKCVRYIQGEGSCLSPPSSD
Sbjct: 421 CFLNPCLSLPPITDLSAPKKCRARFGLDQQNNWCGPCRRKKKCVRYIQGEGSCLSPPSSD 480
Query: 464 GSLLDSPPPSPNLLGSPPRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLLAEATHK 523
GSLLDSPPPSPNLLGSPPRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLLAEATHK
Sbjct: 481 GSLLDSPPPSPNLLGSPPRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLLAEATHK 540
Query: 524 ASALCPNGALDLPPAALQPAAPSSSIAQPSTSSLHSHSSLAGTQPQPLSLVTKSLE 579
ASALCPNGALDLPPAALQPAAPSSSIAQPSTSSLHSHSSLAGTQPQPLSLVTKSLE
Sbjct: 541 ASALCPNGALDLPPAALQPAAPSSSIAQPSTSSLHSHSSLAGTQPQPLSLVTKSLE 596
>gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens]
Length = 602
Score = 1167 bits (3018), Expect = 0.0
Identities = 571/602 (94%), Positives = 573/602 (95%), Gaps = 23/602 (3%)
Query: 1 MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS
Sbjct: 1 MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
Query: 61 DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS
Sbjct: 61 DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
Query: 121 LSPTART-----------------------YLQMKWPLLDVQAGSLQSRQALKDARSPSP 157
LSPTART YLQMKWPLLDVQAGSLQSRQALKDARSPSP
Sbjct: 121 LSPTARTLHFQSGSTHYSAYKTIEHQIAVQYLQMKWPLLDVQAGSLQSRQALKDARSPSP 180
Query: 158 AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS 217
AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS
Sbjct: 181 AHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDIS 240
Query: 218 PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP 277
PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP
Sbjct: 241 PYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPP 300
Query: 278 HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY 337
HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY
Sbjct: 301 HHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLY 360
Query: 338 MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR 397
MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR
Sbjct: 361 MKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSAR 420
Query: 398 DNYGKKKKRKRDKQPGETNDLSAPKKCRARFGLDQQNNWCGPCRRKKKCVRYIQGEGSCL 457
DNYGKKKKRKRDKQPGETND + PKKCRA FGLD+Q WC PCRRKKKCVRYIQGEGSCL
Sbjct: 421 DNYGKKKKRKRDKQPGETNDANTPKKCRALFGLDRQTLWCKPCRRKKKCVRYIQGEGSCL 480
Query: 458 SPPSSDGSLLDSPPPSPNLLGSPPRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLL 517
SPPSSDGSLLDSPPPSPNLLGSPPRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLL
Sbjct: 481 SPPSSDGSLLDSPPPSPNLLGSPPRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLL 540
Query: 518 AEATHKASALCPNGALDLPPAALQPAAPSSSIAQPSTSSLHSHSSLAGTQPQPLSLVTKS 577
AEATHKASALCPNGALDLPPAALQPAAPSSSIAQPSTSSLHSHSSLAGTQPQPLSLVTKS
Sbjct: 541 AEATHKASALCPNGALDLPPAALQPAAPSSSIAQPSTSSLHSHSSLAGTQPQPLSLVTKS 600
Query: 578 LE 579
LE
Sbjct: 601 LE 602
>gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens]
Length = 442
Score = 866 bits (2238), Expect = 0.0
Identities = 416/416 (100%), Positives = 416/416 (100%)
Query: 1 MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS
Sbjct: 1 MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
Query: 61 DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS
Sbjct: 61 DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
Query: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL 180
LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL
Sbjct: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL 180
Query: 181 ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ 240
ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ
Sbjct: 181 ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ 240
Query: 241 QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES 300
QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES
Sbjct: 241 QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES 300
Query: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360
SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI
Sbjct: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360
Query: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETN 416
LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETN
Sbjct: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETN 416
>gi|226371623 transcription factor 7-like 2 isoform 4 [Homo sapiens]
Length = 455
Score = 854 bits (2206), Expect = 0.0
Identities = 413/419 (98%), Positives = 414/419 (98%), Gaps = 4/419 (0%)
Query: 1 MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS
Sbjct: 1 MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
Query: 61 DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS
Sbjct: 61 DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
Query: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL 180
LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL
Sbjct: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPL 180
Query: 181 ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQ 240
ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGW
Sbjct: 181 ITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGW---- 236
Query: 241 QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES 300
QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES
Sbjct: 237 QGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQES 296
Query: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360
SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI
Sbjct: 297 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 356
Query: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNDLS 419
LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETN+ S
Sbjct: 357 LGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNEHS 415
>gi|226371620 transcription factor 7-like 2 isoform 3 [Homo sapiens]
Length = 489
Score = 844 bits (2180), Expect = 0.0
Identities = 416/463 (89%), Positives = 416/463 (89%), Gaps = 47/463 (10%)
Query: 1 MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS
Sbjct: 1 MPQLNGGGGDDLGANDELISFKDEGEQEEKSSENSSAERDLADVKSSLVNESETNQNSSS 60
Query: 61 DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS
Sbjct: 61 DSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGS 120
Query: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIV------------------- 161
LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIV
Sbjct: 121 LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSPLPCCTQGHDCQHFYPPS 180
Query: 162 ----------------------------SNKVPVVQHPHHVHPLTPLITYSNEHFTPGNP 193
SNKVPVVQHPHHVHPLTPLITYSNEHFTPGNP
Sbjct: 181 DFTVSTQVFRDMKRSHSLQKVGEPWCIESNKVPVVQHPHHVHPLTPLITYSNEHFTPGNP 240
Query: 194 PPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGF 253
PPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGF
Sbjct: 241 PPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGF 300
Query: 254 RHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKH 313
RHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKH
Sbjct: 301 RHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKH 360
Query: 314 QDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQ 373
QDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQ
Sbjct: 361 QDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQ 420
Query: 374 AKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETN 416
AKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETN
Sbjct: 421 AKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETN 463
>gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens]
Length = 588
Score = 671 bits (1730), Expect = 0.0
Identities = 359/585 (61%), Positives = 426/585 (72%), Gaps = 39/585 (6%)
Query: 7 GGGDDLGANDELISFKDEG-EQEEKSSENSSAERDLADVKSSLVNESETNQNSSSDSEAE 65
GGGDDLGANDELI F+DEG E++E SS+++SA+RDL +VKSSLVNESE NQ+SSSDSEAE
Sbjct: 27 GGGDDLGANDELIPFQDEGGEEQEPSSDSASAQRDLDEVKSSLVNESE-NQSSSSDSEAE 85
Query: 66 RRPPPRSESFRDKSRESLEEAAKRQDGGLFKGPPYPGYPFIMIPDLTSPYLPNGSLSPT- 124
RRP P ++F+ K R+ E + QD FKGPPYPGYPF+MIPDL+SPYL NG LSP
Sbjct: 86 RRPQPVRDTFQ-KPRDYFAEVRRPQDSAFFKGPPYPGYPFLMIPDLSSPYLSNGPLSPGG 144
Query: 125 ARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPLITYS 184
ARTYLQMKWPLLDV + + +KD RSPSPAH+ SNKVPVVQHPHH+HPLTPLITYS
Sbjct: 145 ARTYLQMKWPLLDVPSSA-----TVKDTRSPSPAHL-SNKVPVVQHPHHMHPLTPLITYS 198
Query: 185 NEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQP 244
N+HF+PG+PP HL ++DPKTGIPRPPHP ++SPYYPLSPG VGQIPHPLGWLVPQQGQP
Sbjct: 199 NDHFSPGSPPTHLSPEIDPKTGIPRPPHPSELSPYYPLSPGAVGQIPHPLGWLVPQQGQP 258
Query: 245 VYPITTGGFRHPYPTALTVNASMS-----RFPPHMVPPHHT-LHTTGIPHPAIVTPTVKQ 298
+Y + GGFRHPYP AL +NASMS RF PHMV P H L T+GIPHPAIV+P VKQ
Sbjct: 259 MYSLPPGGFRHPYP-ALAMNASMSSLVSSRFSPHMVAPAHPGLPTSGIPHPAIVSPIVKQ 317
Query: 299 ESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAIN 358
E + + S K + K+EE+KKPH+KKPLNAFMLYMKEMRAKVVAECTLKESAAIN
Sbjct: 318 EPAPPSLSPAVSVKSPVTVKKEEEKKPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAIN 377
Query: 359 QILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNDL 418
QILGR+WH LSREEQAKYYELARKERQLH QLYP WSARDNYGKKKKRKR+KQ +T
Sbjct: 378 QILGRKWHNLSREEQAKYYELARKERQLHSQLYPTWSARDNYGKKKKRKREKQLSQTQSQ 437
Query: 419 SAPKKCRARFGLDQQNNWCGPCRRKKKCVRYIQGEGSCLSPPSSDGSLLDSPPPSPNLLG 478
++ + KK CV+Y+ E C SP SS GS+LDSP L
Sbjct: 438 QQVQEAEGALA----------SKSKKPCVQYLPPEKPCDSPASSHGSMLDSPATPSAALA 487
Query: 479 SPPRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLLAEATHKASALCPNGALDLPPA 538
SP A + +EQ QPLSL+ KP+ A L++ A L A+A +S + PP
Sbjct: 488 SPAAPAATHSEQAQPLSLTTKPETRAQLAL--HSAAFLSAKAAASSSGQMGS----QPPL 541
Query: 539 ALQP----AAPSSSIAQPST--SSLHSHSSLAGTQPQPLSLVTKS 577
+P + P++ +A P + ++LH+H +L Q QPLSLVTKS
Sbjct: 542 LSRPLPLGSMPTALLASPPSFPATLHAHQALPVLQAQPLSLVTKS 586
>gi|7705917 lymphoid enhancer-binding factor 1 isoform 1 [Homo
sapiens]
Length = 399
Score = 451 bits (1159), Expect = e-126
Identities = 249/422 (59%), Positives = 290/422 (68%), Gaps = 52/422 (12%)
Query: 1 MPQLNGGGGD-----DLGANDELISFKDEGE-QEEK---SSENSSAERDLADVKSSLVNE 51
MPQL+GGGG +L A DE+I FKDEG+ Q+EK + E DLAD+KSSLVNE
Sbjct: 1 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60
Query: 52 SETNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLF-KGPPYPGYP-FIMIP 109
SE +S+ E R+ E + DK+RE ++ K DGGL+ KGP Y Y +IM+P
Sbjct: 61 SEIIP-ASNGHEVARQAQTSQEPYHDKAREHPDDG-KHPDGGLYNKGPSYSSYSGYIMMP 118
Query: 110 DLTS-PYLPNGSLSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVV 168
++ + PY+ NGSLSP P SNKVPVV
Sbjct: 119 NMNNDPYMSNGSLSP---------------------------------PIPRTSNKVPVV 145
Query: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
Q H VHPLTPLITYS+EHF+PG+ P H+P+DV+ K G+ R P PDI +YPLSPG VG
Sbjct: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205
Query: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
QI PLGW QGQPVYPIT GGFR PYP++L+V+ SMSRF HM+P HTTGIPH
Sbjct: 206 QITPPLGW----QGQPVYPIT-GGFRQPYPSSLSVDTSMSRFSHHMIPGPPGPHTTGIPH 260
Query: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
PAIVTP VKQE +D +H + +KE+E K+PHIKKPLNAFMLYMKEMRA VVAE
Sbjct: 261 PAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAE 320
Query: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR
Sbjct: 321 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 380
Query: 409 DK 410
+K
Sbjct: 381 EK 382
>gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo
sapiens]
Length = 386
Score = 396 bits (1018), Expect = e-110
Identities = 227/422 (53%), Positives = 264/422 (62%), Gaps = 80/422 (18%)
Query: 1 MPQLNGGGGD-----DLGANDELISFKDEGE-QEEK---SSENSSAERDLADVKSSLVNE 51
MPQL+GGGG +L A DE+I FKDEG+ Q+EK + E DLAD+KSSLVNE
Sbjct: 1 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60
Query: 52 SETNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLF-KGPPYPGYP-FIMIP 109
SE +S+ E R+ E + DK+RE ++ K DGGL+ KGP Y Y +IM+P
Sbjct: 61 SEIIP-ASNGHEVARQAQTSQEPYHDKAREHPDDG-KHPDGGLYNKGPSYSSYSGYIMMP 118
Query: 110 DLTS-PYLPNGSLSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVV 168
++ + PY+ NGSLSP P SNKVPVV
Sbjct: 119 NMNNDPYMSNGSLSP---------------------------------PIPRTSNKVPVV 145
Query: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
Q H VHPLTPLITYS+EHF+PG+ P H+P+DV+ K G+ R P PDI +YPLSPG VG
Sbjct: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205
Query: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
QI PLGW F HM+P HTTGIPH
Sbjct: 206 QITPPLGW---------------------------------FSHHMIPGPPGPHTTGIPH 232
Query: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
PAIVTP VKQE +D +H + +KE+E K+PHIKKPLNAFMLYMKEMRA VVAE
Sbjct: 233 PAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAE 292
Query: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR
Sbjct: 293 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 352
Query: 409 DK 410
+K
Sbjct: 353 EK 354
>gi|195222732 lymphoid enhancer-binding factor 1 isoform 2 [Homo
sapiens]
Length = 371
Score = 396 bits (1018), Expect = e-110
Identities = 227/422 (53%), Positives = 264/422 (62%), Gaps = 80/422 (18%)
Query: 1 MPQLNGGGGD-----DLGANDELISFKDEGE-QEEK---SSENSSAERDLADVKSSLVNE 51
MPQL+GGGG +L A DE+I FKDEG+ Q+EK + E DLAD+KSSLVNE
Sbjct: 1 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60
Query: 52 SETNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLF-KGPPYPGYP-FIMIP 109
SE +S+ E R+ E + DK+RE ++ K DGGL+ KGP Y Y +IM+P
Sbjct: 61 SEIIP-ASNGHEVARQAQTSQEPYHDKAREHPDDG-KHPDGGLYNKGPSYSSYSGYIMMP 118
Query: 110 DLTS-PYLPNGSLSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVV 168
++ + PY+ NGSLSP P SNKVPVV
Sbjct: 119 NMNNDPYMSNGSLSP---------------------------------PIPRTSNKVPVV 145
Query: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
Q H VHPLTPLITYS+EHF+PG+ P H+P+DV+ K G+ R P PDI +YPLSPG VG
Sbjct: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205
Query: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
QI PLGW F HM+P HTTGIPH
Sbjct: 206 QITPPLGW---------------------------------FSHHMIPGPPGPHTTGIPH 232
Query: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
PAIVTP VKQE +D +H + +KE+E K+PHIKKPLNAFMLYMKEMRA VVAE
Sbjct: 233 PAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAE 292
Query: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR
Sbjct: 293 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 352
Query: 409 DK 410
+K
Sbjct: 353 EK 354
>gi|198442849 transcription factor 7 (T-cell specific, HMG-box) 5
[Homo sapiens]
Length = 366
Score = 316 bits (809), Expect = 4e-86
Identities = 181/352 (51%), Positives = 213/352 (60%), Gaps = 52/352 (14%)
Query: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
Q PH V L+ EHF +P P PAD+ K + RP PD+S +Y L+ G++G
Sbjct: 37 QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
Query: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
Q+PH + W F HP +L + + + H IPH
Sbjct: 90 QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
Query: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
PAIV P+ KQE D + +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
Query: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
Query: 409 DKQPGETNDLSAPKKCRARFGLDQQNNWCGPCRRKKKCVRYIQGEGSCLSPPSSDGSLLD 468
+K T D +PKKCRARFGL+QQ +WCGPCRRKKKC+RY+ GEG C SP SD S L
Sbjct: 236 EKHQESTTDPGSPKKCRARFGLNQQTDWCGPCRRKKKCIRYLPGEGRCPSPVPSDDSALG 295
Query: 469 SP-------PPSPNLLGSPPRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPP 513
P PS +LL P + + + P S P LS+ P P
Sbjct: 296 CPGSPAPQDSPSYHLLPRFPTELLTSPAEPAPTS----PGLSTALSLPTPGP 343
>gi|42518080 transcription factor 7 (T-cell specific, HMG-box)
isoform 1 [Homo sapiens]
Length = 384
Score = 284 bits (726), Expect = 2e-76
Identities = 190/437 (43%), Positives = 236/437 (54%), Gaps = 102/437 (23%)
Query: 1 MPQLNGGGG-----DDLGANDELISFKDEGEQEEKSSENSSA--ERDLADVKSSLVNESE 53
MPQL+ GGG DDLGA DEL++F+DEGE+++ S +S+A ERDLA++KSSLVNESE
Sbjct: 1 MPQLDSGGGGAGGGDDLGAPDELLAFQDEGEEQDDKSRDSAAGPERDLAELKSSLVNESE 60
Query: 54 -------------TNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQD--GGLFKGP 98
+ ++EA R F DK E LE+ K + G++K
Sbjct: 61 GAAGGAGIPGVPGAGAGARGEAEALGREHAAQRLFPDKLPEPLEDGLKAPECTSGMYKET 120
Query: 99 PYPGYPFIMIPDLTSPYLPNGSLSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPA 158
Y + +M Y P +G+ Q Q P P
Sbjct: 121 VYSAFNLLM------HYPP---------------------PSGAGQHPQ-------PQPP 146
Query: 159 HIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISP 218
+N+ P H + L Y EHF +P P PAD+ K + RP PD+S
Sbjct: 147 LHKANQPP--------HGVPQLSLY--EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSG 194
Query: 219 YYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPH 278
+Y L+ G++GQ+PH + W F HP +L + + +
Sbjct: 195 FYSLTSGSMGQLPHTVSW----------------FTHP---SLMLGSGVPG--------- 226
Query: 279 HTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYM 338
H IPHPAIV P+ KQE D + +SK E+E KKP IKKPLNAFMLYM
Sbjct: 227 ---HPAAIPHPAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYM 280
Query: 339 KEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARD 398
KEMRAKV+AECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARD
Sbjct: 281 KEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARD 340
Query: 399 NYGKKKKRKRDKQPGET 415
NYGKKK+R R+K T
Sbjct: 341 NYGKKKRRSREKHQEST 357
>gi|42714657 transcription factor 7 (T-cell specific, HMG-box)
isoform 4 [Homo sapiens]
Length = 268
Score = 276 bits (705), Expect = 5e-74
Identities = 151/273 (55%), Positives = 176/273 (64%), Gaps = 41/273 (15%)
Query: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
Q PH V L+ EHF +P P PAD+ K + RP PD+S +Y L+ G++G
Sbjct: 37 QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
Query: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
Q+PH + W F HP +L + + + H IPH
Sbjct: 90 QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
Query: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
PAIV P+ KQE D + +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
Query: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
Query: 409 DKQPGETNDLSAPKKCRARFGLDQQNNWCGPCR 441
+K T D +PKKCRARFGL+QQ +WCGPCR
Sbjct: 236 EKHQESTTDPGSPKKCRARFGLNQQTDWCGPCR 268
>gi|42518074 transcription factor 7 (T-cell specific, HMG-box)
isoform 3 [Homo sapiens]
Length = 269
Score = 234 bits (596), Expect = 2e-61
Identities = 133/257 (51%), Positives = 160/257 (62%), Gaps = 41/257 (15%)
Query: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
Q PH V L+ EHF +P P PAD+ K + RP PD+S +Y L+ G++G
Sbjct: 37 QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
Query: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
Q+PH + W F HP +L + + + H IPH
Sbjct: 90 QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
Query: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
PAIV P+ KQE D + +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
Query: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
Query: 409 DKQPGETNDLSAPKKCR 425
+K T + + P++ +
Sbjct: 236 EKHQESTTETNWPRELK 252
>gi|198442851 transcription factor 7 (T-cell specific, HMG-box) 6
[Homo sapiens]
Length = 250
Score = 233 bits (593), Expect = 5e-61
Identities = 134/251 (53%), Positives = 156/251 (62%), Gaps = 41/251 (16%)
Query: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
Q PH V L+ EHF +P P PAD+ K + RP PD+S +Y L+ G++G
Sbjct: 37 QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
Query: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
Q+PH + W F HP +L + + + H IPH
Sbjct: 90 QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
Query: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
PAIV P+ KQE D + +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
Query: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
Query: 409 DKQPGETNDLS 419
+K T D S
Sbjct: 236 EKHQESTTDNS 246
>gi|42518078 transcription factor 7 (T-cell specific, HMG-box)
isoform 2 [Homo sapiens]
Length = 269
Score = 230 bits (586), Expect = 3e-60
Identities = 132/247 (53%), Positives = 154/247 (62%), Gaps = 41/247 (16%)
Query: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
Q PH V L+ EHF +P P PAD+ K + RP PD+S +Y L+ G++G
Sbjct: 37 QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
Query: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
Q+PH + W F HP +L + + + H IPH
Sbjct: 90 QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
Query: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
PAIV P+ KQE D + +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
Query: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
Query: 409 DKQPGET 415
+K T
Sbjct: 236 EKHQEST 242
>gi|47419938 transcription factor 7 (T-cell specific, HMG-box)
isoform 2 [Homo sapiens]
Length = 269
Score = 230 bits (586), Expect = 3e-60
Identities = 132/247 (53%), Positives = 154/247 (62%), Gaps = 41/247 (16%)
Query: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228
Q PH V L+ EHF +P P PAD+ K + RP PD+S +Y L+ G++G
Sbjct: 37 QPPHGVPQLSLY-----EHFNSPHPTP-APADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89
Query: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288
Q+PH + W F HP +L + + + H IPH
Sbjct: 90 QLPHTVSW----------------FTHP---SLMLGSGVPG------------HPAAIPH 118
Query: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348
PAIV P+ KQE D + +SK E+E KKP IKKPLNAFMLYMKEMRAKV+AE
Sbjct: 119 PAIVPPSGKQELQPFD---RNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAE 175
Query: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408
CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKK+R R
Sbjct: 176 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSR 235
Query: 409 DKQPGET 415
+K T
Sbjct: 236 EKHQEST 242
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 75.9 bits (185), Expect = 1e-13
Identities = 64/239 (26%), Positives = 102/239 (42%), Gaps = 40/239 (16%)
Query: 205 TGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVN 264
TG P PP + P SPG PHPLG + +G P PT
Sbjct: 89 TGSADPERPPGAT--CPESPGPGP--PHPLGVVESGKGPP-------------PTT-EEE 130
Query: 265 ASMSRFPPHMVPPHHTLHTTG---IPHPAIVTPTVKQESSQSDVGSL----HSSKHQDSK 317
AS P + + H I P I P + + +L SS +D +
Sbjct: 131 ASGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKERDSSSEKDGR 190
Query: 318 KEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYY 377
+++K HI++P+NAFM++ K RA V +++ +++ILG W+AL +E+ KY+
Sbjct: 191 SPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYH 250
Query: 378 ELARKERQLHMQLYPGWSARDNYGKKK---------------KRKRDKQPGETNDLSAP 421
+LA + ++ H + +P W + KK K R++ ET +AP
Sbjct: 251 DLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKETRERSMSETGTAAAP 309
Score = 42.4 bits (98), Expect = 0.001
Identities = 34/113 (30%), Positives = 44/113 (38%), Gaps = 9/113 (7%)
Query: 222 LSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFR-HPYPTALTVNASMSRFPPHMV----- 275
L+PG VG P P L P P P+ T + P PT+ A S+ PP +V
Sbjct: 1065 LAPGQVGVSPVPSPQLPPACAAPGGPVITAFYSGSPAPTSSAPLAQPSQAPPSLVYTVAT 1124
Query: 276 ---PPHHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKP 325
PP T+ G P PA TP + GS+ S + K P
Sbjct: 1125 STTPPAATILPKGPPAPATATPAPTSPFPSATAGSMTYSLVAPKAQRPSPKAP 1177
>gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Homo
sapiens]
Length = 753
Score = 73.9 bits (180), Expect = 4e-13
Identities = 79/356 (22%), Positives = 133/356 (37%), Gaps = 69/356 (19%)
Query: 237 LVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHM------VPPHHTLHTTGIPHPA 290
LV + + T+G F P+ L + ++ PP PP + T +P
Sbjct: 235 LVHGSAEVILAPTSGAFG-PHQQDLRIPLTLHTVPPGARIQFQGAPPSELIRLTKVPLTP 293
Query: 291 IVT-------PTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRA 343
+ T P+VK E+ + L S + + H+K+P+NAFM++ + R
Sbjct: 294 VPTKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRP 353
Query: 344 KVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKK 403
+ +A I+ LG W+ LS E++ YY+ A+K ++ H + +PGW + GK+
Sbjct: 354 ALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKR 413
Query: 404 KKRKRDKQPGETNDLSAPKKCRARFGLDQQNNWCGPCRRKKKCVRYIQGEGSCLSPPSSD 463
K RF L N + G +
Sbjct: 414 K----------------------RFPLSVSNVFSGTTQ---------------------- 429
Query: 464 GSLLDSPPPSPNLLGSPPRDA---KSQTEQTQPLSLSLKPDPLAHLSMMPPPPALLLAEA 520
+++ + P + SP Q T P+ + L ++ P P L +
Sbjct: 430 -NIISTNPTTVYPYRSPTYSVVIPSLQNPITHPVGETSPAIQLPTPAVQSPSPVTLFQPS 488
Query: 521 THKASALCPNGALDLPPAALQPAAPSSSIAQPS---TSSLHSHSSLAGTQPQPLSL 573
A+ + A+ P + PA P PS T LHS ++ QP P+SL
Sbjct: 489 VSSAAQV----AVQDPSLPVYPALPPQRFTGPSQTDTHQLHSEATHTVKQPTPVSL 540
>gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo
sapiens]
Length = 501
Score = 71.2 bits (173), Expect = 2e-12
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 237 LVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHM------VPPHHTLHTTGIPHPA 290
LV + + T+G F P+ L + ++ PP PP + T +P
Sbjct: 235 LVHGSAEVILAPTSGAFG-PHQQDLRIPLTLHTVPPGARIQFQGAPPSELIRLTKVPLTP 293
Query: 291 IVT-------PTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRA 343
+ T P+VK E+ + L S + + H+K+P+NAFM++ + R
Sbjct: 294 VPTKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRP 353
Query: 344 KVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKK 403
+ +A I+ LG W+ LS E++ YY+ A+K ++ H + +PGW + GK+
Sbjct: 354 ALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKR 413
Query: 404 KK 405
K+
Sbjct: 414 KR 415
>gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Homo
sapiens]
Length = 841
Score = 65.9 bits (159), Expect = 1e-10
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 324 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 383
+PHIK+P+NAFM++ K+ R K++ ++ I++ILG RW ++S +E+ YYE +
Sbjct: 631 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 690
Query: 384 RQLHMQLYPGWSARDNYGKKKKRKR 408
++H++ YP NY K + KR
Sbjct: 691 SKIHLEKYP------NYKYKPRPKR 709
>gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Homo
sapiens]
Length = 801
Score = 65.9 bits (159), Expect = 1e-10
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 324 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 383
+PHIK+P+NAFM++ K+ R K++ ++ I++ILG RW ++S +E+ YYE +
Sbjct: 591 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 650
Query: 384 RQLHMQLYPGWSARDNYGKKKKRKR 408
++H++ YP NY K + KR
Sbjct: 651 SKIHLEKYP------NYKYKPRPKR 669
>gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo
sapiens]
Length = 804
Score = 65.9 bits (159), Expect = 1e-10
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 324 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 383
+PHIK+P+NAFM++ K+ R K++ ++ I++ILG RW ++S +E+ YYE +
Sbjct: 594 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 653
Query: 384 RQLHMQLYPGWSARDNYGKKKKRKR 408
++H++ YP NY K + KR
Sbjct: 654 SKIHLEKYP------NYKYKPRPKR 672
>gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo
sapiens]
Length = 808
Score = 65.9 bits (159), Expect = 1e-10
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 324 KPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKE 383
+PHIK+P+NAFM++ K+ R K++ ++ I++ILG RW ++S +E+ YYE +
Sbjct: 598 EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARL 657
Query: 384 RQLHMQLYPGWSARDNYGKKKKRKR 408
++H++ YP NY K + KR
Sbjct: 658 SKIHLEKYP------NYKYKPRPKR 676
>gi|11967991 SRY-box 17 [Homo sapiens]
Length = 414
Score = 64.3 bits (155), Expect = 3e-10
Identities = 65/250 (26%), Positives = 104/250 (41%), Gaps = 15/250 (6%)
Query: 322 KKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELAR 381
K + I++P+NAFM++ K+ R ++ + +A ++++LG+ W AL+ E+ + E A
Sbjct: 63 KGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAE 122
Query: 382 KERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNDLSAPKKCRARFGLDQQNNWCGPCR 441
+ R HMQ +P + R K+ KR + + G + L+ P+ L +
Sbjct: 123 RLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAA----ALGPEGGRVAMDG 178
Query: 442 RKKKCVRYIQGEGSCLSPPSSDGSLLDSPPPSPNLLGSPPRDA-KSQTEQTQPLSLSLKP 500
+ G L PP G D LG+PP D T T PL + P
Sbjct: 179 LGLQFPEQGFPAGPPLLPPHMGGHYRDC-----QSLGAPPLDGYPLPTPDTSPLD-GVDP 232
Query: 501 DPLAHLSMMPPP-PA---LLLAEATHKASALCPNGALDLPPAALQPAAPSSSIAQPSTSS 556
DP + MP PA A+ + A P P +PA PS S+
Sbjct: 233 DPAFFAAPMPGDCPAAGTYSYAQVSDYAGPPEPPAGPMHPRLGPEPAGPSIPGLLAPPSA 292
Query: 557 LHSHSSLAGT 566
LH + G+
Sbjct: 293 LHVYYGAMGS 302
>gi|41406089 SRY-box 13 [Homo sapiens]
Length = 622
Score = 63.2 bits (152), Expect = 6e-10
Identities = 67/295 (22%), Positives = 116/295 (39%), Gaps = 61/295 (20%)
Query: 160 IVSNKVPVVQHPHHVHPLTPLITYSNEHFT--PGNPPPHLPADVDPKTGIPRPPHPPDIS 217
I + ++Q H ++ L I N + P PP H P V P + + P P
Sbjct: 198 IAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLPVTPDSQLALPIQPIPCK 257
Query: 218 PY-YPLS-----PGTVGQIPHPLGWLVPQQGQPVYPIT-TGGFRHPY------PTALTVN 264
P YPL P V + P + P Q +P P+ T + P +L ++
Sbjct: 258 PVEYPLQLLHSPPAPVVKRPGAMATHHPLQ-EPSQPLNLTAKPKAPELPNTSSSPSLKMS 316
Query: 265 ASMSRFPPHMVPPH---------------------------------HTLHTTGIPHPAI 291
+ + R P H P H+ G P+
Sbjct: 317 SCVPRPPSHGGPTRDLQSSPPSLPLGFLGEGDAVTKAIQDARQLLHSHSGALDGSPNTPF 376
Query: 292 VTPTVKQESSQS----DVGSLHS------SKHQDSKKE--EEKKKPHIKKPLNAFMLYMK 339
+ +SS + + G +H S D + E + HIK+P+NAFM++ K
Sbjct: 377 RKDLISLDSSPAKERLEDGCVHPLEEAMLSCDMDGSRHFPESRNSSHIKRPMNAFMVWAK 436
Query: 340 EMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGW 394
+ R K++ +++I++ILG RW +++ +E+ YYE + + H++ YP +
Sbjct: 437 DERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPDY 491
>gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]
Length = 446
Score = 62.8 bits (151), Expect = 8e-10
Identities = 96/418 (22%), Positives = 156/418 (37%), Gaps = 89/418 (21%)
Query: 191 GNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITT 250
G P +PAD+ ++ + P PPD + P S P + Q ++ +
Sbjct: 10 GARSPRVPADL-ARSILISLPFPPDSLAHRPPSSA-------------PTESQGLFTVAA 55
Query: 251 GGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQ------------ 298
P P A + A+++ P P ++L T + +P + TPT
Sbjct: 56 -----PAPGAPSPPATLAHLLP--APAMYSLLETELKNP-VGTPTQAAGTGGPAAPGGAG 107
Query: 299 ESSQSDVGSLHS---SKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESA 355
+SS + G +S S S + +K+P+NAFM++ + R K+ E ++
Sbjct: 108 KSSANAAGGANSGGGSSGGASGGGGGTDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNS 167
Query: 356 AINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDK----- 410
I++ LG W L+ E+ + + A++ R +HM+ YP + R K K+DK
Sbjct: 168 EISKRLGADWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPS 227
Query: 411 ---QPGETNDLSAPKKCRAR----FGLDQQ-------NNWCGPCRRKKKCVRYIQGEGSC 456
PG +A A G+ Q+ N W +Q +
Sbjct: 228 GLLPPGAAAAAAAAAAAAAAASSPVGVGQRLDTYTHVNGWA------NGAYSLVQEQLGY 281
Query: 457 LSPPSSDGSLLDSPPPSPNLLGSPPRDAKSQTEQTQPLSLSLKPDPLAHLSMMPPPPALL 516
PPS + SPPP P L PP L + MMPP
Sbjct: 282 AQPPS-----MSSPPPPPAL---PPMHRYDMA-------------GLQYSPMMPPGAQSY 320
Query: 517 LAEATHKASALCPNGALDLPPAAL------QPAAPSSSIAQPSTSSLHSHSSLAGTQP 568
+ A A+A G AA QPA +++ A + SL S+ ++P
Sbjct: 321 MNVAAAAAAASGYGGMAPSATAAAAAAYGQQPATAAAAAAAAAAMSLGPMGSVVKSEP 378
>gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo
sapiens]
Length = 377
Score = 60.8 bits (146), Expect = 3e-09
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360
S G S +++S+ + PHIK+P+NAFM++ K+ R K++ ++ I++I
Sbjct: 145 SDGSAGVSESRIYRESRGRGSNE-PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI 203
Query: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGW 394
LG RW A++ E+ YYE + + H++ YP +
Sbjct: 204 LGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDY 237
>gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo
sapiens]
Length = 750
Score = 60.8 bits (146), Expect = 3e-09
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360
S G S +++S+ + PHIK+P+NAFM++ K+ R K++ ++ I++I
Sbjct: 518 SDGSAGVSESRIYRESRGRGSNE-PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI 576
Query: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGW 394
LG RW A++ E+ YYE + + H++ YP +
Sbjct: 577 LGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDY 610
>gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo
sapiens]
Length = 763
Score = 60.8 bits (146), Expect = 3e-09
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 301 SQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQI 360
S G S +++S+ + PHIK+P+NAFM++ K+ R K++ ++ I++I
Sbjct: 531 SDGSAGVSESRIYRESRGRGSNE-PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKI 589
Query: 361 LGRRWHALSREEQAKYYELARKERQLHMQLYPGW 394
LG RW A++ E+ YYE + + H++ YP +
Sbjct: 590 LGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDY 623
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.130 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,275,173
Number of Sequences: 37866
Number of extensions: 1901128
Number of successful extensions: 12793
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 634
Number of HSP's that attempted gapping in prelim test: 9704
Number of HSP's gapped (non-prelim): 3111
length of query: 579
length of database: 18,247,518
effective HSP length: 108
effective length of query: 471
effective length of database: 14,157,990
effective search space: 6668413290
effective search space used: 6668413290
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.