Guide to the Human Genome
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Name: MTMR11 Sequence: fasta or formatted (709aa) NCBI GI: 224994251
Description:

myotubularin related protein 11 isoform a

Referenced in:

Inositol Pathways

Other entries for this name:
alt prot [640aa] myotubularin related protein 11 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         46           2
 C cysteine            1.7         12           1
 D aspartate           4.7         33           1
 E glutamate           5.9         42           2
 F phenylalanine       3.9         28           2
 G glycine             7.9         56           2
 H histidine           2.1         15           2
 I isoleucine          3.1         22           1
 K lysine              2.1         15           2
 L leucine            12.8         91           3
 M methionine          1.3          9           1
 N asparagine          2.7         19           1
 P proline             8.2         58           2
 Q glutamine           6.1         43           2
 R arginine            8.0         57           2
 S serine              8.7         62           2
 T threonine           3.8         27           1
 V valine              5.4         38           2
 W tryptophan          3.4         24           2
 Y tyrosine            1.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myotubularin related protein 11 isoform a 
MTMR11                0.881   myotubularin related protein 11 isoform b 
MTMR10                0.196   myotubularin related protein 10 
MTMR12                0.137   myotubularin related protein 12 
MTMR9                 0.087   myotubularin related protein 9 
MTMR2                 0.083   myotubularin-related protein 2 isoform 1 
MTMR2                 0.082   myotubularin-related protein 2 isoform 2 
MTMR2                 0.082   myotubularin-related protein 2 isoform 2 
MTMR1                 0.078   myotubularin-related protein 1 
MTM1                  0.071   myotubularin 
MTMR8                 0.058   myotubularin related protein 8 
MTMR4                 0.053   myotubularin related protein 4 
MTMR3                 0.053   myotubularin-related protein 3 isoform b 
MTMR3                 0.053   myotubularin-related protein 3 isoform a 
MTMR3                 0.053   myotubularin-related protein 3 isoform c 
MTMR6                 0.051   myotubularin related protein 6 
MTMR7                 0.048   myotubularin related protein 7 
SBF1                  0.047   SET binding factor 1 
SBF2                  0.046   SET binding factor 2 
LOC100291925          0.008   PREDICTED: hypothetical protein XP_002345110 
LOC100291392          0.008   PREDICTED: hypothetical protein XP_002347851 
LOC100287042          0.007   PREDICTED: hypothetical protein XP_002343584 
PPM1F                 0.007   protein phosphatase 1F 
MAMSTR                0.005   MEF2 activating motif and SAP domain containing tra...
LOC100291115          0.005   PREDICTED: hypothetical protein XP_002348194 
LOC100287661          0.005   PREDICTED: hypothetical protein XP_002343856 
RAD54L2               0.005   RAD54-like 2 
COQ2                  0.005   para-hydroxybenzoate-polyprenyltransferase, mitochon...
HSD11B1L              0.005   short-chain dehydrogenase/reductase 10 isoform d [Ho...
HSD11B1L              0.005   short-chain dehydrogenase/reductase 10 isoform a [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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