Guide to the Human Genome
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Name: MTMR10 Sequence: fasta or formatted (777aa) NCBI GI: 124028527
Description:

myotubularin related protein 10

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         34           2
 C cysteine            2.2         17           2
 D aspartate           4.8         37           2
 E glutamate           5.8         45           3
 F phenylalanine       5.5         43           1
 G glycine             6.0         47           8
 H histidine           2.3         18           2
 I isoleucine          5.3         41           2
 K lysine              7.2         56           2
 L leucine            10.9         85           3
 M methionine          1.4         11           1
 N asparagine          3.9         30           1
 P proline             5.8         45           3
 Q glutamine           4.9         38           2
 R arginine            4.9         38           2
 S serine              9.5         74           3
 T threonine           5.0         39           1
 V valine              5.1         40           2
 W tryptophan          1.9         15           1
 Y tyrosine            3.1         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myotubularin related protein 10 
MTMR12                0.263   myotubularin related protein 12 
MTMR11                0.181   myotubularin related protein 11 isoform a 
MTMR11                0.172   myotubularin related protein 11 isoform b 
MTMR2                 0.089   myotubularin-related protein 2 isoform 1 
MTMR2                 0.089   myotubularin-related protein 2 isoform 2 
MTMR2                 0.089   myotubularin-related protein 2 isoform 2 
MTMR9                 0.086   myotubularin related protein 9 
MTMR1                 0.086   myotubularin-related protein 1 
MTM1                  0.082   myotubularin 
MTMR8                 0.072   myotubularin related protein 8 
MTMR3                 0.069   myotubularin-related protein 3 isoform b 
MTMR3                 0.069   myotubularin-related protein 3 isoform a 
MTMR3                 0.069   myotubularin-related protein 3 isoform c 
MTMR6                 0.067   myotubularin related protein 6 
MTMR4                 0.067   myotubularin related protein 4 
MTMR7                 0.058   myotubularin related protein 7 
SBF1                  0.057   SET binding factor 1 
SBF2                  0.054   SET binding factor 2 
ZNF503                0.011   zinc finger protein 503 
TRA2A                 0.010   transformer-2 alpha 
CAPNS1                0.010   calpain, small subunit 1 
CAPNS1                0.010   calpain, small subunit 1 
C6orf174              0.009   hypothetical protein LOC387104 
ANKRD17               0.009   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.009   ankyrin repeat domain protein 17 isoform b 
RFX1                  0.009   regulatory factor X1 
SOX1                  0.008   SRY (sex determining region Y)-box 1 
ZFHX3                 0.008   AT-binding transcription factor 1 
POU3F3                0.008   POU class 3 homeobox 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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