Guide to the Human Genome
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Name: MTMR2 Sequence: fasta or formatted (571aa) NCBI GI: 41350316
Description:

myotubularin-related protein 2 isoform 2

Referenced in:

Inositol Pathways

Other entries for this name:
alt mRNA [571aa] myotubularin-related protein 2 isoform 2
alt prot [643aa] myotubularin-related protein 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         32           1
 C cysteine            1.6          9           1
 D aspartate           4.0         23           1
 E glutamate           8.2         47           2
 F phenylalanine       4.4         25           1
 G glycine             5.1         29           3
 H histidine           2.8         16           1
 I isoleucine          5.4         31           1
 K lysine              5.4         31           2
 L leucine             9.5         54           2
 M methionine          2.1         12           1
 N asparagine          5.1         29           2
 P proline             5.3         30           2
 Q glutamine           3.3         19           2
 R arginine            7.2         41           2
 S serine              7.5         43           3
 T threonine           4.6         26           1
 V valine              6.7         38           3
 W tryptophan          1.9         11           1
 Y tyrosine            4.4         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myotubularin-related protein 2 isoform 2 
MTMR2                 1.000   myotubularin-related protein 2 isoform 1 
MTMR2                 1.000   myotubularin-related protein 2 isoform 2 
MTMR1                 0.752   myotubularin-related protein 1 
MTM1                  0.676   myotubularin 
MTMR8                 0.308   myotubularin related protein 8 
MTMR6                 0.302   myotubularin related protein 6 
MTMR7                 0.290   myotubularin related protein 7 
MTMR3                 0.284   myotubularin-related protein 3 isoform b 
MTMR3                 0.284   myotubularin-related protein 3 isoform a 
MTMR3                 0.284   myotubularin-related protein 3 isoform c 
MTMR9                 0.269   myotubularin related protein 9 
MTMR4                 0.265   myotubularin related protein 4 
SBF2                  0.130   SET binding factor 2 
MTMR10                0.122   myotubularin related protein 10 
SBF1                  0.107   SET binding factor 1 
MTMR12                0.104   myotubularin related protein 12 
MTMR11                0.103   myotubularin related protein 11 isoform a 
MTMR11                0.101   myotubularin related protein 11 isoform b 
MTMR14                0.013   jumpy isoform 3 
MTMR14                0.013   jumpy isoform 1 
MTMR14                0.013   jumpy isoform 2 
DUSP7                 0.007   dual specificity phosphatase 7 
BUB1B                 0.006   budding uninhibited by benzimidazoles 1 beta 
ACY3                  0.006   aspartoacylase 3 
LDOC1L                0.006   leucine zipper, down-regulated in cancer 1-like [Hom...
DUSP9                 0.004   dual specificity phosphatase 9 
TRNT1                 0.004   tRNA nucleotidyl transferase, CCA-adding, 1 
RB1CC1                0.004   Rb1-inducible coiled coil protein 1 isoform 2 [Homo...
RB1CC1                0.004   Rb1-inducible coiled coil protein 1 isoform 1 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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