Guide to the Human Genome
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Name: COQ2 Sequence: fasta or formatted (384aa) NCBI GI: 90403590
Description:

para-hydroxybenzoate-polyprenyltransferase, mitochondrial

Referenced in:

Oxidative Phosphorylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         40           3
 C cysteine            2.1          8           1
 D aspartate           4.4         17           2
 E glutamate           1.8          7           1
 F phenylalanine       3.4         13           1
 G glycine            10.4         40           2
 H histidine           1.3          5           1
 I isoleucine          5.5         21           1
 K lysine              4.2         16           2
 L leucine            14.3         55           3
 M methionine          2.3          9           1
 N asparagine          2.9         11           1
 P proline             5.7         22           2
 Q glutamine           2.6         10           1
 R arginine            5.5         21           1
 S serine              6.2         24           1
 T threonine           5.7         22           1
 V valine              4.2         16           2
 W tryptophan          3.4         13           1
 Y tyrosine            3.6         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   para-hydroxybenzoate-polyprenyltransferase, mitochon... 
COX10                 0.037   heme A:farnesyltransferase 
LOC100291076          0.010   PREDICTED: hypothetical protein XP_002347846 
LOC100293985          0.009   PREDICTED: hypothetical protein 
LOC100289986          0.009   PREDICTED: hypothetical protein XP_002346657 
LOC100288009          0.009   PREDICTED: hypothetical protein XP_002342502 
MTMR11                0.009   myotubularin related protein 11 isoform a 
SHC2                  0.009   SHC (Src homology 2 domain containing) transforming...
LOC100293492          0.008   PREDICTED: hypothetical protein 
LOC729162             0.008   PREDICTED: similar to hCG1981372 
LOC729162             0.008   PREDICTED: similar to hCG1981372 
LOC389906             0.008   PREDICTED: similar to Serine/threonine-protein kina...
TSPAN18               0.008   tetraspanin 18 isoform 1 
TSPAN18               0.008   tetraspanin 18 isoform 2 
LOC401399             0.007   hypothetical protein LOC401399 
C14orf4               0.007   chromosome 14 open reading frame 4 
NKX6-1                0.007   NK6 transcription factor related, locus 1 
IL17RE                0.007   interleukin 17 receptor E isoform 1 
IL17RE                0.007   interleukin 17 receptor E isoform 2 
IL17RE                0.007   interleukin 17 receptor E isoform 1 
COL2A1                0.005   collagen, type II, alpha 1 isoform 1 precursor [Hom...
COL2A1                0.005   collagen, type II, alpha 1 isoform 2 precursor [Hom...
LOC100293107          0.005   PREDICTED: hypothetical protein 
LOC100293337          0.005   PREDICTED: hypothetical protein 
LOC100290679          0.005   PREDICTED: hypothetical protein XP_002347834 
LOC100290919          0.005   PREDICTED: hypothetical protein XP_002347810 
LOC100288571          0.005   PREDICTED: hypothetical protein XP_002343612 
LOC100288369          0.005   PREDICTED: hypothetical protein XP_002343563 
DCST1                 0.005   DC-STAMP domain containing 1 isoform 2 
PAIP1                 0.005   poly(A) binding protein interacting protein 1 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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