Guide to the Human Genome
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Name: HSD11B1L Sequence: fasta or formatted (152aa) NCBI GI: 38424083
Description:

short-chain dehydrogenase/reductase 10 isoform d

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Other entries for this name:
alt prot [315aa] short-chain dehydrogenase/reductase 10 isoform e
alt prot [205aa] short-chain dehydrogenase/reductase 10 isoform a
alt prot [199aa] short-chain dehydrogenase/reductase 10 isoform c
alt prot [181aa] short-chain dehydrogenase/reductase 10 isoform f
alt prot [286aa] short-chain dehydrogenase/reductase 10 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.5         22           4
 C cysteine            1.3          2           1
 D aspartate           3.3          5           1
 E glutamate           2.0          3           1
 F phenylalanine       5.3          8           2
 G glycine             6.6         10           2
 H histidine           0.0          0           0
 I isoleucine          2.0          3           1
 K lysine              2.6          4           1
 L leucine            11.8         18           2
 M methionine          1.3          2           1
 N asparagine          2.0          3           1
 P proline             5.3          8           1
 Q glutamine           2.6          4           1
 R arginine           11.2         17           2
 S serine              7.9         12           2
 T threonine           5.3          8           1
 V valine             11.2         17           3
 W tryptophan          2.0          3           1
 Y tyrosine            2.0          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   short-chain dehydrogenase/reductase 10 isoform d [Ho... 
HSD11B1L              1.000   short-chain dehydrogenase/reductase 10 isoform a [Ho...
HSD11B1L              1.000   short-chain dehydrogenase/reductase 10 isoform c [Ho...
HSD11B1L              1.000   short-chain dehydrogenase/reductase 10 isoform b [Ho...
HSD11B1L              0.535   short-chain dehydrogenase/reductase 10 isoform e [Ho...
HSD11B1L              0.535   short-chain dehydrogenase/reductase 10 isoform f [Ho...
HSD11B1               0.374   11-beta-hydroxysteroid dehydrogenase 1 
HSD11B1               0.374   11-beta-hydroxysteroid dehydrogenase 1 
DHRS7                 0.088   dehydrogenase/reductase (SDR family) member 7 
DHRS7B                0.088   dehydrogenase/reductase (SDR family) member 7B [Homo...
BDH1                  0.077   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  0.077   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  0.077   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
RDH16                 0.077   retinol dehydrogenase 16 
DHRS7C                0.077   dehydrogenase/reductase (SDR family) member 7C [Hom...
HSD17B6               0.077   hydroxysteroid (17-beta) dehydrogenase 6 
RDH8                  0.077   retinol dehydrogenase 8 (all-trans) 
HSD17B2               0.073   hydroxysteroid (17-beta) dehydrogenase 2 
HSD17B11              0.066   estradiol 17-beta-dehydrogenase 11 
SDR9C7                0.059   short chain dehydrogenase/reductase family 9C, membe...
DHRS9                 0.055   NADP-dependent retinol dehydrogenase/reductase [Homo...
HSD17B13              0.055   hydroxysteroid (17-beta) dehydrogenase 13 isoform B...
HSD17B13              0.055   hydroxysteroid (17-beta) dehydrogenase 13 isoform A...
DHRS9                 0.055   NADP-dependent retinol dehydrogenase/reductase [Hom...
DHRS9                 0.055   NADP-dependent retinol dehydrogenase/reductase [Hom...
DHRS9                 0.055   NADP-dependent retinol dehydrogenase/reductase [Homo...
RDH5                  0.055   retinol dehydrogenase 5 (11-cis and 9-cis) 
HSD17B14              0.048   dehydrogenase/reductase (SDR family) member 10 [Homo...
HSD17B12              0.044   hydroxysteroid (17-beta) dehydrogenase 12 
HSD11B2               0.044   hydroxysteroid (11-beta) dehydrogenase 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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