Guide to the Human Genome
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Name: PPM1F Sequence: fasta or formatted (454aa) NCBI GI: 7661862
Description:

protein phosphatase 1F

Referenced in:

Calmodulin and Calcium
Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.2         51           3
 C cysteine            0.7          3           1
 D aspartate           5.7         26           3
 E glutamate           9.3         42           7
 F phenylalanine       3.7         17           2
 G glycine             7.5         34           2
 H histidine           2.6         12           1
 I isoleucine          1.5          7           1
 K lysine              2.6         12           1
 L leucine            10.8         49           3
 M methionine          1.8          8           1
 N asparagine          2.0          9           1
 P proline             6.6         30           3
 Q glutamine           6.8         31           2
 R arginine            7.3         33           2
 S serine              6.4         29           2
 T threonine           3.7         17           2
 V valine              7.5         34           2
 W tryptophan          1.3          6           1
 Y tyrosine            0.9          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1F 
PPM1E                 0.390   protein phosphatase 1E 
FLJ40125              0.122   protein phosphatase 1B-like 
ILKAP                 0.114   integrin-linked kinase-associated protein phosphatas...
PPM1L                 0.099   protein phosphatase 1 (formerly 2C)-like 
PPM1K                 0.089   protein phosphatase 1K (PP2C domain containing) [Ho...
PPM1B                 0.084   protein phosphatase 1B isoform 5 
PPM1B                 0.084   protein phosphatase 1B isoform 2 
PPM1B                 0.084   protein phosphatase 1B isoform 1 
PPM1B                 0.083   protein phosphatase 1B isoform 4 
PPM1A                 0.081   protein phosphatase 1A isoform 1 
PPM1A                 0.081   protein phosphatase 1A isoform 2 
PPM1A                 0.081   protein phosphatase 1A isoform 3 
PPM1G                 0.076   protein phosphatase 1G 
PPM1G                 0.076   protein phosphatase 1G 
PPM1D                 0.060   protein phosphatase 1D 
PPM1H                 0.036   protein phosphatase 1H (PP2C domain containing) [Ho...
PPM1J                 0.031   protein phosphatase 1J (PP2C domain containing) [Hom...
PHLPP1                0.031   PH domain and leucine rich repeat protein phosphatas...
PHLPP2                0.030   PH domain and leucine rich repeat protein phosphatas...
PPM1M                 0.028   protein phosphatase 1M isoform a 
PDP2                  0.025   pyruvate dehydrogenase phosphatase isoenzyme 2 [Homo...
PDP1                  0.023   pyruvate dehyrogenase phosphatase catalytic subunit ...
PDP1                  0.023   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.023   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.023   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.023   pyruvate dehyrogenase phosphatase catalytic subunit...
PPM1M                 0.016   protein phosphatase 1M isoform b 
CASZ1                 0.015   castor homolog 1, zinc finger isoform a 
PPP1R1B               0.014   protein phosphatase 1, regulatory (inhibitor) subuni...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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