Guide to the Human Genome
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Name: HSD11B1L Sequence: fasta or formatted (205aa) NCBI GI: 38424075
Description:

short-chain dehydrogenase/reductase 10 isoform a

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Other entries for this name:
alt prot [315aa] short-chain dehydrogenase/reductase 10 isoform e
alt prot [199aa] short-chain dehydrogenase/reductase 10 isoform c
alt prot [181aa] short-chain dehydrogenase/reductase 10 isoform f
alt prot [152aa] short-chain dehydrogenase/reductase 10 isoform d
alt prot [286aa] short-chain dehydrogenase/reductase 10 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.7         28           4
 C cysteine            1.0          2           1
 D aspartate           4.4          9           2
 E glutamate           1.5          3           1
 F phenylalanine       5.4         11           2
 G glycine             8.3         17           2
 H histidine           0.5          1           1
 I isoleucine          2.0          4           1
 K lysine              2.4          5           1
 L leucine            13.2         27           3
 M methionine          1.5          3           1
 N asparagine          2.4          5           1
 P proline             5.4         11           1
 Q glutamine           2.4          5           1
 R arginine            9.8         20           2
 S serine              6.3         13           2
 T threonine           5.4         11           1
 V valine              9.3         19           3
 W tryptophan          2.4          5           1
 Y tyrosine            2.9          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   short-chain dehydrogenase/reductase 10 isoform a [Ho... 
HSD11B1L              0.867   short-chain dehydrogenase/reductase 10 isoform c [Ho...
HSD11B1L              0.867   short-chain dehydrogenase/reductase 10 isoform b [Ho...
HSD11B1L              0.711   short-chain dehydrogenase/reductase 10 isoform d [Ho...
HSD11B1L              0.536   short-chain dehydrogenase/reductase 10 isoform e [Ho...
HSD11B1L              0.380   short-chain dehydrogenase/reductase 10 isoform f [Ho...
HSD11B1               0.297   11-beta-hydroxysteroid dehydrogenase 1 
HSD11B1               0.297   11-beta-hydroxysteroid dehydrogenase 1 
DHRS7                 0.070   dehydrogenase/reductase (SDR family) member 7 
DHRS7B                0.065   dehydrogenase/reductase (SDR family) member 7B [Homo...
RDH8                  0.065   retinol dehydrogenase 8 (all-trans) 
DHRS7C                0.060   dehydrogenase/reductase (SDR family) member 7C [Hom...
RDH16                 0.057   retinol dehydrogenase 16 
BDH1                  0.057   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  0.057   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  0.057   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
HSD17B6               0.057   hydroxysteroid (17-beta) dehydrogenase 6 
HSD17B14              0.055   dehydrogenase/reductase (SDR family) member 10 [Homo...
HSD17B2               0.052   hydroxysteroid (17-beta) dehydrogenase 2 
HSD17B11              0.047   estradiol 17-beta-dehydrogenase 11 
HSD17B13              0.047   hydroxysteroid (17-beta) dehydrogenase 13 isoform B...
HSD17B13              0.047   hydroxysteroid (17-beta) dehydrogenase 13 isoform A...
SDR9C7                0.044   short chain dehydrogenase/reductase family 9C, membe...
RDH5                  0.042   retinol dehydrogenase 5 (11-cis and 9-cis) 
DHRS9                 0.039   NADP-dependent retinol dehydrogenase/reductase [Homo...
DHRS9                 0.039   NADP-dependent retinol dehydrogenase/reductase [Hom...
DHRS9                 0.039   NADP-dependent retinol dehydrogenase/reductase [Hom...
DHRS9                 0.039   NADP-dependent retinol dehydrogenase/reductase [Homo...
HSD11B2               0.036   hydroxysteroid (11-beta) dehydrogenase 2 
HSD17B1               0.036   hydroxysteroid (17-beta) dehydrogenase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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