Guide to the Human Genome
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Name: MTMR12 Sequence: fasta or formatted (747aa) NCBI GI: 94721263
Description:

myotubularin related protein 12

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7         28           2
 C cysteine            2.5         19           2
 D aspartate           5.8         43           2
 E glutamate           7.8         58           3
 F phenylalanine       5.1         38           3
 G glycine             5.2         39           5
 H histidine           3.3         25           2
 I isoleucine          5.0         37           2
 K lysine              7.9         59           3
 L leucine            11.9         89           3
 M methionine          1.7         13           2
 N asparagine          3.5         26           2
 P proline             4.7         35           2
 Q glutamine           5.8         43           2
 R arginine            4.1         31           2
 S serine              6.7         50           3
 T threonine           5.1         38           1
 V valine              5.6         42           2
 W tryptophan          2.0         15           1
 Y tyrosine            2.5         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myotubularin related protein 12 
MTMR10                0.272   myotubularin related protein 10 
MTMR11                0.131   myotubularin related protein 11 isoform a 
MTMR11                0.122   myotubularin related protein 11 isoform b 
MTMR2                 0.079   myotubularin-related protein 2 isoform 1 
MTMR2                 0.079   myotubularin-related protein 2 isoform 2 
MTMR2                 0.079   myotubularin-related protein 2 isoform 2 
MTM1                  0.073   myotubularin 
MTMR1                 0.073   myotubularin-related protein 1 
MTMR9                 0.067   myotubularin related protein 9 
MTMR8                 0.064   myotubularin related protein 8 
MTMR6                 0.061   myotubularin related protein 6 
MTMR7                 0.055   myotubularin related protein 7 
MTMR3                 0.055   myotubularin-related protein 3 isoform b 
MTMR3                 0.055   myotubularin-related protein 3 isoform a 
MTMR3                 0.055   myotubularin-related protein 3 isoform c 
MTMR4                 0.052   myotubularin related protein 4 
SBF2                  0.050   SET binding factor 2 
SBF1                  0.042   SET binding factor 1 
TBC1D9                0.004   TBC1 domain family, member 9 (with GRAM domain) [Ho...
PIBF1                 0.003   progesterone-induced blocking factor 1 
KIF5C                 0.003   kinesin family member 5C 
CADPS                 0.003   Ca2+-dependent secretion activator isoform 2 
CADPS                 0.003   Ca2+-dependent secretion activator isoform 1 
CADPS                 0.003   Ca2+-dependent secretion activator isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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