Guide to the Human Genome
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Name: MTMR6 Sequence: fasta or formatted (621aa) NCBI GI: 134142348
Description:

myotubularin related protein 6

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         30           2
 C cysteine            2.4         15           1
 D aspartate           4.5         28           1
 E glutamate           7.6         47           2
 F phenylalanine       5.2         32           1
 G glycine             4.0         25           1
 H histidine           3.9         24           3
 I isoleucine          5.0         31           2
 K lysine              7.1         44           2
 L leucine            10.5         65           3
 M methionine          1.9         12           1
 N asparagine          5.2         32           1
 P proline             3.7         23           1
 Q glutamine           4.8         30           1
 R arginine            5.2         32           1
 S serine              8.9         55           2
 T threonine           4.7         29           2
 V valine              5.3         33           2
 W tryptophan          1.4          9           1
 Y tyrosine            4.0         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myotubularin related protein 6 
MTMR7                 0.569   myotubularin related protein 7 
MTMR8                 0.553   myotubularin related protein 8 
MTMR2                 0.278   myotubularin-related protein 2 isoform 1 
MTMR2                 0.278   myotubularin-related protein 2 isoform 2 
MTMR2                 0.278   myotubularin-related protein 2 isoform 2 
MTM1                  0.269   myotubularin 
MTMR1                 0.258   myotubularin-related protein 1 
MTMR9                 0.240   myotubularin related protein 9 
MTMR3                 0.205   myotubularin-related protein 3 isoform b 
MTMR3                 0.205   myotubularin-related protein 3 isoform a 
MTMR3                 0.205   myotubularin-related protein 3 isoform c 
MTMR4                 0.196   myotubularin related protein 4 
MTMR10                0.084   myotubularin related protein 10 
SBF1                  0.081   SET binding factor 1 
SBF2                  0.075   SET binding factor 2 
MTMR12                0.075   myotubularin related protein 12 
MTMR11                0.059   myotubularin related protein 11 isoform a 
MTMR11                0.059   myotubularin related protein 11 isoform b 
MTMR14                0.010   jumpy isoform 3 
MTMR14                0.010   jumpy isoform 1 
MTMR14                0.010   jumpy isoform 2 
CCDC46                0.008   coiled-coil domain containing 46 isoform a 
LOC728080             0.007   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.007   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.007   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.007   PREDICTED: similar to golgi autoantigen, golgin sub...
NUP88                 0.007   nucleoporin 88kDa 
SPATA1                0.007   spermatogenesis associated 1 
BAZ1B                 0.006   bromodomain adjacent to zinc finger domain, 1B [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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