| Name: LOC100287042 | Sequence: fasta or formatted (237aa) | NCBI GI: 239745952 | |
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Description: PREDICTED: hypothetical protein XP_002343584
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 12.2 29 3 C cysteine 3.8 9 1 D aspartate 3.0 7 1 E glutamate 4.2 10 2 F phenylalanine 2.1 5 1 G glycine 11.8 28 2 H histidine 2.5 6 1 I isoleucine 0.8 2 1 K lysine 0.8 2 1 L leucine 5.5 13 2 M methionine 1.3 3 1 N asparagine 1.3 3 1 P proline 14.8 35 1 Q glutamine 4.6 11 1 R arginine 8.4 20 2 S serine 11.0 26 3 T threonine 3.4 8 1 V valine 3.4 8 1 W tryptophan 3.8 9 1 Y tyrosine 1.3 3 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002343584 LOC100291925 0.996 PREDICTED: hypothetical protein XP_002345110 LOC100291392 0.996 PREDICTED: hypothetical protein XP_002347851 DUSP8 0.034 dual specificity phosphatase 8 TAF4 0.030 TBP-associated factor 4 ANKRD56 0.028 ankyrin repeat domain 56 AATK 0.028 apoptosis-associated tyrosine kinase COL9A3 0.028 alpha 3 type IX collagen COL1A1 0.024 alpha 1 type I collagen preproprotein COL16A1 0.024 alpha 1 type XVI collagen precursor MN1 0.024 meningioma 1 GRRP1 0.024 glycine/arginine rich protein 1 CDT1 0.022 chromatin licensing and DNA replication factor 1 [H... COL4A5 0.022 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.022 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.022 type IV collagen alpha 5 isoform 3 precursor ANO8 0.022 anoctamin 8 GREB1 0.022 GREB1 protein isoform a COL28A1 0.022 collagen, type XXVIII precursor FCN3 0.020 ficolin 3 isoform 2 precursor LOC100291627 0.020 PREDICTED: hypothetical protein XP_002345251 LOC100289867 0.020 PREDICTED: hypothetical protein XP_002348034 COL6A2 0.020 alpha 2 type VI collagen isoform 2C2a' precursor [H... COL6A2 0.020 alpha 2 type VI collagen isoform 2C2a precursor [Ho... COL6A2 0.020 alpha 2 type VI collagen isoform 2C2 precursor [Hom... PRB1 0.020 proline-rich protein BstNI subfamily 1 isoform 3 pre... PRB1 0.020 proline-rich protein BstNI subfamily 1 isoform 2 pre... GLDN 0.020 gliomedin BCL9L 0.020 B-cell CLL/lymphoma 9-like COLQ 0.020 acetylcholinesterase collagen-like tail subunit iso...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
