Guide to the Human Genome
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Name: MTMR4 Sequence: fasta or formatted (1195aa) NCBI GI: 217272865
Description:

myotubularin related protein 4

Referenced in:

Inositol Pathways
Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         72           2
 C cysteine            4.4         53           2
 D aspartate           5.7         68           3
 E glutamate           6.7         80           3
 F phenylalanine       3.4         41           1
 G glycine             5.6         67           3
 H histidine           3.3         39           2
 I isoleucine          2.8         33           1
 K lysine              4.5         54           2
 L leucine             9.3        111           2
 M methionine          1.8         21           1
 N asparagine          4.4         52           2
 P proline             7.4         89           3
 Q glutamine           5.0         60           2
 R arginine            5.2         62           2
 S serine              9.6        115           2
 T threonine           4.4         52           1
 V valine              6.4         76           3
 W tryptophan          1.8         22           2
 Y tyrosine            2.3         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myotubularin related protein 4 
MTMR3                 0.431   myotubularin-related protein 3 isoform c 
MTMR3                 0.415   myotubularin-related protein 3 isoform b 
MTMR3                 0.411   myotubularin-related protein 3 isoform a 
MTMR2                 0.123   myotubularin-related protein 2 isoform 1 
MTMR2                 0.122   myotubularin-related protein 2 isoform 2 
MTMR2                 0.122   myotubularin-related protein 2 isoform 2 
MTM1                  0.122   myotubularin 
MTMR1                 0.112   myotubularin-related protein 1 
MTMR8                 0.109   myotubularin related protein 8 
MTMR7                 0.105   myotubularin related protein 7 
MTMR6                 0.098   myotubularin related protein 6 
MTMR9                 0.091   myotubularin related protein 9 
SBF2                  0.055   SET binding factor 2 
SBF1                  0.050   SET binding factor 1 
MTMR10                0.042   myotubularin related protein 10 
MTMR12                0.031   myotubularin related protein 12 
MTMR11                0.031   myotubularin related protein 11 isoform a 
MTMR11                0.031   myotubularin related protein 11 isoform b 
ZFYVE16               0.020   zinc finger, FYVE domain containing 16 
ZFYVE16               0.020   zinc finger, FYVE domain containing 16 
RUFY2                 0.020   RUN and FYVE domain-containing 2 isoform a 
WDFY3                 0.019   WD repeat and FYVE domain containing 3 isoform 3 [Ho...
WDFY3                 0.019   WD repeat and FYVE domain containing 3 isoform 1 [Ho...
RUFY1                 0.019   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.019   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.019   RUN and FYVE domain-containing 1 isoform a 
ZFYVE9                0.018   zinc finger, FYVE domain containing 9 isoform 3 [Hom...
ZFYVE28               0.017   zinc finger, FYVE domain containing 28 
ZFYVE21               0.017   zinc finger, FYVE domain containing 21 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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