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Search of human proteins with 224809573
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|224809573 RAP1 GTPase activating protein isoform b [Homo
sapiens]
(681 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|224809573 RAP1 GTPase activating protein isoform b [Homo sapi... 1373 0.0
gi|224809582 RAP1 GTPase activating protein isoform c [Homo sapi... 1297 0.0
gi|224809578 RAP1 GTPase activating protein isoform a [Homo sapi... 1297 0.0
gi|156086724 GTPase activating Rap/RanGAP domain-like 4 isoform ... 633 0.0
gi|156086740 GTPase activating Rap/RanGAP domain-like 4 isoform ... 616 e-176
gi|71143119 signal-induced proliferation-associated 1 like 3 [Ho... 224 2e-58
gi|7662126 signal-induced proliferation-associated 1 like 1 [Hom... 222 1e-57
gi|112421013 signal-induced proliferation-associated 1 like 2 [H... 221 2e-57
gi|207448705 GTPase activating Rap/RanGAP domain-like 3 [Homo sa... 211 2e-54
gi|206725526 signal-induced proliferation-associated protein 1 [... 210 3e-54
gi|206725523 signal-induced proliferation-associated protein 1 [... 210 3e-54
gi|118600961 akt substrate AS250 [Homo sapiens] 82 2e-15
gi|51230412 GTPase activating Rap/RanGAP domain-like 1 isoform 2... 77 5e-14
gi|51226124 GTPase activating Rap/RanGAP domain-like 1 isoform 1... 77 5e-14
gi|116256350 tuberous sclerosis 2 isoform 4 [Homo sapiens] 73 8e-13
gi|116256352 tuberous sclerosis 2 isoform 1 [Homo sapiens] 73 8e-13
gi|167412124 tuberous sclerosis 2 isoform 5 [Homo sapiens] 73 8e-13
gi|29570782 additional sex combs like 1 [Homo sapiens] 42 0.002
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu... 40 0.005
gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre... 40 0.005
gi|91208420 bassoon protein [Homo sapiens] 40 0.007
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 40 0.009
gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2... 40 0.009
gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1... 40 0.009
gi|20070163 voltage-dependent calcium channel alpha 1G subunit i... 39 0.021
gi|38505294 voltage-dependent calcium channel alpha 1G subunit i... 39 0.021
gi|38505292 voltage-dependent calcium channel alpha 1G subunit i... 39 0.021
gi|38505290 voltage-dependent calcium channel alpha 1G subunit i... 39 0.021
gi|38505288 voltage-dependent calcium channel alpha 1G subunit i... 39 0.021
gi|38505286 voltage-dependent calcium channel alpha 1G subunit i... 39 0.021
>gi|224809573 RAP1 GTPase activating protein isoform b [Homo
sapiens]
Length = 681
Score = 1373 bits (3554), Expect = 0.0
Identities = 681/681 (100%), Positives = 681/681 (100%)
Query: 1 MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN 60
MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN
Sbjct: 1 MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN 60
Query: 61 HEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDV 120
HEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDV
Sbjct: 61 HEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDV 120
Query: 121 IGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRL 180
IGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRL
Sbjct: 121 IGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRL 180
Query: 181 IVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR 240
IVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR
Sbjct: 181 IVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR 240
Query: 241 GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDE 300
GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDE
Sbjct: 241 GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDE 300
Query: 301 NTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPE 360
NTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPE
Sbjct: 301 NTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPE 360
Query: 361 FQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMEN 420
FQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMEN
Sbjct: 361 FQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMEN 420
Query: 421 GSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLLI 480
GSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLLI
Sbjct: 421 GSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLLI 480
Query: 481 PGKSASRFGRRGSAIGIGTVEESLIVPGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRE 540
PGKSASRFGRRGSAIGIGTVEESLIVPGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRE
Sbjct: 481 PGKSASRFGRRGSAIGIGTVEESLIVPGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRE 540
Query: 541 SPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASS 600
SPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASS
Sbjct: 541 SPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASS 600
Query: 601 FASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGSSPDAGKLGDP 660
FASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGSSPDAGKLGDP
Sbjct: 601 FASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGSSPDAGKLGDP 660
Query: 661 ACPEIKIQLEASEQHMPQLGC 681
ACPEIKIQLEASEQHMPQLGC
Sbjct: 661 ACPEIKIQLEASEQHMPQLGC 681
>gi|224809582 RAP1 GTPase activating protein isoform c [Homo
sapiens]
Length = 663
Score = 1297 bits (3357), Expect = 0.0
Identities = 651/689 (94%), Positives = 654/689 (94%), Gaps = 34/689 (4%)
Query: 1 MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN 60
MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN
Sbjct: 1 MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN 60
Query: 61 HEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDV 120
HEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDV
Sbjct: 61 HEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDV 120
Query: 121 IGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRL 180
IGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRL
Sbjct: 121 IGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRL 180
Query: 181 IVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR 240
IVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR
Sbjct: 181 IVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR 240
Query: 241 GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDE 300
GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDE
Sbjct: 241 GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDE 300
Query: 301 NTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPE 360
NTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPE
Sbjct: 301 NTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPE 360
Query: 361 FQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMEN 420
FQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMEN
Sbjct: 361 FQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMEN 420
Query: 421 GSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLLI 480
GSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISL++
Sbjct: 421 GSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLIV 480
Query: 481 PGKSASRFGRRGSAIGIGTVEESLIVPGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRE 540
PGKS +R KKSGPFGSRRSSAIGIENIQEVQEKRE
Sbjct: 481 PGKSPTR--------------------------KKSGPFGSRRSSAIGIENIQEVQEKRE 514
Query: 541 SPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASS 600
SPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASS
Sbjct: 515 SPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASS 574
Query: 601 FASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGSS--------P 652
FASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGSS P
Sbjct: 575 FASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGSSPGPSRSPHP 634
Query: 653 DAGKLGDPACPEIKIQLEASEQHMPQLGC 681
DAGKLGDPACPEIKIQLEASEQHMPQLGC
Sbjct: 635 DAGKLGDPACPEIKIQLEASEQHMPQLGC 663
>gi|224809578 RAP1 GTPase activating protein isoform a [Homo
sapiens]
Length = 727
Score = 1297 bits (3357), Expect = 0.0
Identities = 651/689 (94%), Positives = 654/689 (94%), Gaps = 34/689 (4%)
Query: 1 MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN 60
MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN
Sbjct: 65 MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN 124
Query: 61 HEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDV 120
HEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDV
Sbjct: 125 HEITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDV 184
Query: 121 IGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRL 180
IGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRL
Sbjct: 185 IGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRL 244
Query: 181 IVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR 240
IVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR
Sbjct: 245 IVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFR 304
Query: 241 GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDE 300
GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDE
Sbjct: 305 GGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDE 364
Query: 301 NTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPE 360
NTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPE
Sbjct: 365 NTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPE 424
Query: 361 FQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMEN 420
FQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMEN
Sbjct: 425 FQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMEN 484
Query: 421 GSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLLI 480
GSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISL++
Sbjct: 485 GSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLIV 544
Query: 481 PGKSASRFGRRGSAIGIGTVEESLIVPGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRE 540
PGKS +R KKSGPFGSRRSSAIGIENIQEVQEKRE
Sbjct: 545 PGKSPTR--------------------------KKSGPFGSRRSSAIGIENIQEVQEKRE 578
Query: 541 SPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASS 600
SPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASS
Sbjct: 579 SPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASS 638
Query: 601 FASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGSS--------P 652
FASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGSS P
Sbjct: 639 FASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGSSPGPSRSPHP 698
Query: 653 DAGKLGDPACPEIKIQLEASEQHMPQLGC 681
DAGKLGDPACPEIKIQLEASEQHMPQLGC
Sbjct: 699 DAGKLGDPACPEIKIQLEASEQHMPQLGC 727
>gi|156086724 GTPase activating Rap/RanGAP domain-like 4 isoform 1
[Homo sapiens]
Length = 730
Score = 633 bits (1633), Expect = 0.0
Identities = 342/650 (52%), Positives = 438/650 (67%), Gaps = 47/650 (7%)
Query: 1 MIEKMQGSRMDEQRCSFPPPLKTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTN 60
M+EKMQG +++EQ+ P P K ++DYIPYPS+ EV+ + GP+P ++LPQFGGYWIE
Sbjct: 62 MLEKMQGIKLEEQK---PGPQKNKDDYIPYPSIDEVVEKGGPYPQVILPQFGGYWIEDPE 118
Query: 61 H---------EITSIPETEPLQSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGH 111
+ I E + L T KLEC AR YR+HFLGK+H N+Y ++LG+
Sbjct: 119 NVGTPTSLGSSICEEEEEDNLSPNTFGYKLECKGEARAYRRHFLGKDHLNFYCTGSSLGN 178
Query: 112 LVFSLKYDVIGDQEHLRLLLRTKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYP 171
L+ S+K + E+LR++LR+K +T H+ IP++ L++ P+V Q+AK C+D RF P
Sbjct: 179 LILSVKCEEAEGIEYLRVILRSKLKTVHERIPLAGLSKLPSVPQIAKAFCDDAVGLRFNP 238
Query: 172 VLYPKASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKV 231
VLYPKAS++IV++DEH ++N FKFGVIYQK QT EEELF NEESPAF EFL+ LG +
Sbjct: 239 VLYPKASQMIVSYDEHEVNNTFKFGVIYQKARQTLEEELFGNNEESPAFKEFLDLLGDTI 298
Query: 232 KLQDFKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGND 291
LQDFKGFRGGLDVTHGQTG ESVY FR++EIMFHVSTKLP+T+GDAQQLQRKRHIGND
Sbjct: 299 TLQDFKGFRGGLDVTHGQTGVESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGND 358
Query: 292 IVAVVFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPD 351
IVA++FQ+ENTPFVPDMIASNFLHAY+VVQ E G + P YKVSVTAR+DVP FGPPLP
Sbjct: 359 IVAIIFQEENTPFVPDMIASNFLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPS 418
Query: 352 PAVFRKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGL 411
P VF+KGPEF+EFLLTKL NAE AC K++KFAKLE+RTRAALL+ L++ELH H+Q+M+GL
Sbjct: 419 PPVFQKGPEFREFLLTKLTNAENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGL 478
Query: 412 GGDEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLA 471
G +EDK ENG G GGF ESFKR IR RS SM+ M KK SHSG
Sbjct: 479 GPEEDKFENG-GHGGFLESFKRAIRVRSHSMETMVGGQKK------SHSGG--------- 522
Query: 472 KAAGISLLIPGKSASRFGRRGSAIGIGTVEESLIV-----PGKSPTRKKSGPFGSRRSSA 526
IPG + + T ++ +SP +++SG F +
Sbjct: 523 --------IPGSLSGGISHNSMEVTKTTFSPPVVAATVKNQSRSPIKRRSGLFPRLHT-- 572
Query: 527 IGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAE 586
G E + + + +S + KTPD GH SQE KSE SS SSPE+ N+ + + E
Sbjct: 573 -GSEGQGDSRARCDSTSSTPKTPDGGHSSQEIKSETSSNPSSPEI--CPNKEKPFMKLKE 629
Query: 587 ALKDFSRSSSSASSFASVVEETEGVDGEDTGLESVSSSGTPHKRDSFIYS 636
+ SRSSSS SS +S E E ++ D+G S S+ +P K++ F+YS
Sbjct: 630 NGRAISRSSSSTSSVSSTAGEGEAMEEGDSG-GSQPSTTSPFKQEVFVYS 678
>gi|156086740 GTPase activating Rap/RanGAP domain-like 4 isoform 2
[Homo sapiens]
Length = 715
Score = 616 bits (1588), Expect = e-176
Identities = 332/629 (52%), Positives = 423/629 (67%), Gaps = 44/629 (6%)
Query: 22 KTEEDYIPYPSVHEVLGREGPFPLILLPQFGGYWIEGTNH---------EITSIPETEPL 72
K ++DYIPYPS+ EV+ + GP+P ++LPQFGGYWIE + I E + L
Sbjct: 65 KMQDDYIPYPSIDEVVEKGGPYPQVILPQFGGYWIEDPENVGTPTSLGSSICEEEEEDNL 124
Query: 73 QSPTTKVKLECNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVIGDQEHLRLLLR 132
T KLEC AR YR+HFLGK+H N+Y ++LG+L+ S+K + E+LR++LR
Sbjct: 125 SPNTFGYKLECKGEARAYRRHFLGKDHLNFYCTGSSLGNLILSVKCEEAEGIEYLRVILR 184
Query: 133 TKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRLIVTFDEHVISNN 192
+K +T H+ IP++ L++ P+V Q+AK C+D RF PVLYPKAS++IV++DEH ++N
Sbjct: 185 SKLKTVHERIPLAGLSKLPSVPQIAKAFCDDAVGLRFNPVLYPKASQMIVSYDEHEVNNT 244
Query: 193 FKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHGQTGT 252
FKFGVIYQK QT EEELF NEESPAF EFL+ LG + LQDFKGFRGGLDVTHGQTG
Sbjct: 245 FKFGVIYQKARQTLEEELFGNNEESPAFKEFLDLLGDTITLQDFKGFRGGLDVTHGQTGV 304
Query: 253 ESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENTPFVPDMIASN 312
ESVY FR++EIMFHVSTKLP+T+GDAQQLQRKRHIGNDIVA++FQ+ENTPFVPDMIASN
Sbjct: 305 ESVYTTFRDREIMFHVSTKLPFTDGDAQQLQRKRHIGNDIVAIIFQEENTPFVPDMIASN 364
Query: 313 FLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKLINA 372
FLHAY+VVQ E G + P YKVSVTAR+DVP FGPPLP P VF+KGPEF+EFLLTKL NA
Sbjct: 365 FLHAYIVVQVETPGTETPSYKVSVTAREDVPTFGPPLPSPPVFQKGPEFREFLLTKLTNA 424
Query: 373 EYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMMGLGGDEDKMENGSGGGGFFESFK 432
E AC K++KFAKLE+RTRAALL+ L++ELH H+Q+M+GLG +EDK ENG G GGF ESFK
Sbjct: 425 ENACCKSDKFAKLEDRTRAALLDNLHDELHAHTQAMLGLGPEEDKFENG-GHGGFLESFK 483
Query: 433 RVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLLIPGKSASRFGRRG 492
R IR RS SM+ M KK SHSG IPG +
Sbjct: 484 RAIRVRSHSMETMVGGQKK------SHSGG-----------------IPGSLSGGISHNS 520
Query: 493 SAIGIGTVEESLIV-----PGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQK 547
+ T ++ +SP +++SG F + G E + + + +S + K
Sbjct: 521 MEVTKTTFSPPVVAATVKNQSRSPIKRRSGLFPRLHT---GSEGQGDSRARCDSTSSTPK 577
Query: 548 TPDSGHVSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEE 607
TPD GH SQE KSE SS SSPE+ N+ + + E + SRSSSS SS +S E
Sbjct: 578 TPDGGHSSQEIKSETSSNPSSPEI--CPNKEKPFMKLKENGRAISRSSSSTSSVSSTAGE 635
Query: 608 TEGVDGEDTGLESVSSSGTPHKRDSFIYS 636
E ++ D+G S S+ +P K++ F+YS
Sbjct: 636 GEAMEEGDSG-GSQPSTTSPFKQEVFVYS 663
>gi|71143119 signal-induced proliferation-associated 1 like 3 [Homo
sapiens]
Length = 1781
Score = 224 bits (572), Expect = 2e-58
Identities = 128/338 (37%), Positives = 186/338 (55%), Gaps = 33/338 (9%)
Query: 87 ARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVI------GDQEHLRLLLRTK------ 134
AR Y+ +F+GKEH NY+ +D LG + S+K + + G Q R++ RT+
Sbjct: 501 ARYYQDYFVGKEHANYFGVDEKLGPVAVSIKREKLEDHKEHGPQYQYRIIFRTRELITLR 560
Query: 135 ---------CRTYHDV---IPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLYPKASRLIV 182
T H +P+ E+ V+ + C + ++ PK + ++
Sbjct: 561 GSILEDATPTATKHGTGRGLPLKDALEY--VIPELNIHCLRLALNT------PKVTEQLL 612
Query: 183 TFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGG 242
DE + K G++Y K GQ+SEEE+++ E PAF EFL +G+KV L+ F +
Sbjct: 613 KLDEQGLCRKHKVGILYCKAGQSSEEEMYNNEEAGPAFEEFLSLIGEKVCLKGFTKYAAQ 672
Query: 243 LDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENT 302
LDV TGT S+Y +++ EIMFHVST LPYT + QQL RKRHIGNDIV ++FQ+
Sbjct: 673 LDVKTDSTGTHSLYTMYQDYEIMFHVSTLLPYTPNNRQQLLRKRHIGNDIVTIIFQEPGA 732
Query: 303 -PFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEF 361
PF P I S+F H +++V+ D Y ++VT D P FGPP+P FRK F
Sbjct: 733 LPFTPKNIRSHFQHVFIIVRVHNPCTDNVCYSMAVTRSKDAPPFGPPIPSGTTFRKSDVF 792
Query: 362 QEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYE 399
++FLL K+INAE A +K++KF + RTR L+ L E
Sbjct: 793 RDFLLAKVINAENAAHKSDKFHTMATRTRQEYLKDLAE 830
>gi|7662126 signal-induced proliferation-associated 1 like 1 [Homo
sapiens]
Length = 1804
Score = 222 bits (565), Expect = 1e-57
Identities = 128/331 (38%), Positives = 185/331 (55%), Gaps = 17/331 (5%)
Query: 87 ARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVI------GDQEHLRLLLRT------K 134
A YRK F KEH+NY+ D LG + S++ + G + R++ RT +
Sbjct: 489 AYYYRKFFYQKEHWNYFGADENLGPVAVSIRREKPDEMKENGSPYNYRIIFRTSELMTLR 548
Query: 135 CRTYHDVIPISCLTEFPNVVQMAKL---VCEDVNVDRFYPVLY-PKASRLIVTFDEHVIS 190
D IP + + + ++ V ++NV PK + ++ DE ++
Sbjct: 549 GSVLEDAIPSTAKHSTARGLPLKEVLEHVVPELNVQCLRLAFNTPKVTEQLMKLDEQGLN 608
Query: 191 NNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHGQT 250
K G++Y K GQ++EEE+++ PAF EFL+ LG++V+L+ F+ +R LD T
Sbjct: 609 YQQKVGIMYCKAGQSTEEEMYNNESAGPAFEEFLQLLGERVRLKGFEKYRAQLDTKTDST 668
Query: 251 GTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENT-PFVPDMI 309
GT S+Y +++ EIMFHVST LPYT + QQL RKRHIGNDIV +VFQ+ PF P I
Sbjct: 669 GTHSLYTTYKDYEIMFHVSTMLPYTPNNKQQLLRKRHIGNDIVTIVFQEPGAQPFSPKNI 728
Query: 310 ASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLTKL 369
S+F H +V+V+ D Y V+VT DVP FGPP+P F K F++FLL K+
Sbjct: 729 RSHFQHVFVIVRVHNPCSDSVCYSVAVTRSRDVPSFGPPIPKGVTFPKSNVFRDFLLAKV 788
Query: 370 INAEYACYKAEKFAKLEERTRAALLETLYEE 400
INAE A +K+EKF + RTR L+ L E+
Sbjct: 789 INAENAAHKSEKFRAMATRTRQEYLKDLAEK 819
>gi|112421013 signal-induced proliferation-associated 1 like 2 [Homo
sapiens]
Length = 1722
Score = 221 bits (563), Expect = 2e-57
Identities = 132/332 (39%), Positives = 182/332 (54%), Gaps = 20/332 (6%)
Query: 87 ARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVI-------GDQEHLRLLLRTKCRT-- 137
A YRK F GKEH NY+ +D LG + S++ + + G Q + R+ RT T
Sbjct: 484 AYYYRKFFYGKEHQNYFGIDENLGPVAVSIRREKVEDAKEKEGSQFNYRVAFRTSELTTL 543
Query: 138 ----YHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLY-----PKASRLIVTFDEHV 188
D IP + + + K V E V + L PK S ++ DE
Sbjct: 544 RGAILEDAIPSTARHGTARGLPL-KEVLEYVIPELSIQCLRQASNSPKVSEQLLKLDEQG 602
Query: 189 ISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHG 248
+S K G++Y K GQ++EEE+++ PAF EFL+ LGQ+V+L+ F +R LD
Sbjct: 603 LSFQHKIGILYCKAGQSTEEEMYNNETAGPAFEEFLDLLGQRVRLKGFSKYRAQLDNKTD 662
Query: 249 QTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQDENT-PFVPD 307
TGT S+Y +++ E+MFHVST LPY + QQL RKRHIGNDIV +VFQ+ PF P
Sbjct: 663 STGTHSLYTTYKDYELMFHVSTLLPYMPNNRQQLLRKRHIGNDIVTIVFQEPGALPFTPK 722
Query: 308 MIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFLLT 367
I S+F H +V+V+ + Y V V+ DVP FGPP+P F K F++FLL
Sbjct: 723 SIRSHFQHVFVIVKVHNPCTENVCYSVGVSRSKDVPPFGPPIPKGVTFPKSAVFRDFLLA 782
Query: 368 KLINAEYACYKAEKFAKLEERTRAALLETLYE 399
K+INAE A +K+EKF + RTR L+ L E
Sbjct: 783 KVINAENAAHKSEKFRAMATRTRQEYLKDLAE 814
>gi|207448705 GTPase activating Rap/RanGAP domain-like 3 [Homo
sapiens]
Length = 1013
Score = 211 bits (536), Expect = 2e-54
Identities = 129/336 (38%), Positives = 188/336 (55%), Gaps = 20/336 (5%)
Query: 77 TKVKLECNPT--ARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVIGDQE--HLRLLLR 132
T V LE NP R Y K+FLG+ H NY DA S+ +Q R +L
Sbjct: 85 TDVHLE-NPEYHTRWYFKYFLGQVHQNYIGNDAEKSPFFLSVTLSDQNNQRVPQYRAILW 143
Query: 133 TKCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYP----VLYPKASRLIVTFDEHV 188
K T +P S P K + +N+D+F + +P+ + ++ +E
Sbjct: 144 RKTGTQKICLPYS-----PTKTLSVKSILSAMNLDKFEKGPREIFHPEIQKDLLVLEEQE 198
Query: 189 ISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFKGFRGGLDVTHG 248
S NFKFGV++ K GQ +++E+FS S F +FL LG + L+ + G+RGGLD +
Sbjct: 199 GSVNFKFGVLFAKDGQLTDDEMFSNEIGSEPFQKFLNLLGDTITLKGWTGYRGGLDTKND 258
Query: 249 QTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVFQ--DENTP-FV 305
TG SVY ++ EIMFHVST LPY++ + QQ++RKRHIGNDIV +VFQ +E++P F
Sbjct: 259 TTGIHSVYTVYQGHEIMFHVSTMLPYSKENKQQVERKRHIGNDIVTIVFQEGEESSPAFK 318
Query: 306 PDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVFRKGPEFQEFL 365
P MI S+F H + +V+ + Y++ + + + VP FGPPLP P VF EF++FL
Sbjct: 319 PSMIRSHFTHIFALVRYNQQNDN---YRLKIFSEESVPLFGPPLPTPPVFTDHQEFRDFL 375
Query: 366 LTKLINAEYACYKAEKFAKLEERTRAALLETLYEEL 401
L KLIN E A + FA+ RT L+ +L+++L
Sbjct: 376 LVKLINGEKATLETPTFAQKRRRTLDMLIRSLHQDL 411
>gi|206725526 signal-induced proliferation-associated protein 1
[Homo sapiens]
Length = 1042
Score = 210 bits (535), Expect = 3e-54
Identities = 132/342 (38%), Positives = 185/342 (54%), Gaps = 14/342 (4%)
Query: 70 EPLQSPTTKVKLE-CNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVI-----GD 123
E Q+ T+ LE + A YRK+F GKEH N++ +D +LG + SL+ + G
Sbjct: 198 EEPQNRTSAYSLEHADLGAGYYRKYFYGKEHQNFFGMDESLGPVAVSLRREEKEGSGGGT 257
Query: 124 QEHLRLLLRT-KCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLY-----PKA 177
R+++RT + RT I L P + + E V L PK
Sbjct: 258 LHSYRVIVRTTQLRTLRGTISEDALPPGPPRGLSPRKLLEHVAPQLSPSCLRLGSASPKV 317
Query: 178 SRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFK 237
R ++T DE V+S K G++Y + GQ SEEE+++ E PAF++FL LG V+L+ F+
Sbjct: 318 PRTLLTLDEQVLSFQRKVGILYCRAGQGSEEEMYNNQEAGPAFMQFLTLLGDVVRLKGFE 377
Query: 238 GFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVF 297
+R LD TGT S+Y +++ EIMFHVST LPYT + QQL RKRHIGNDIV +VF
Sbjct: 378 SYRAQLDTKTDSTGTHSLYTTYQDHEIMFHVSTMLPYTPNNQQQLLRKRHIGNDIVTIVF 437
Query: 298 QDENT-PFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLP-DPAVF 355
Q+ + PF P I S+F H ++VV+A Y+V+V+ D P FGP LP F
Sbjct: 438 QEPGSKPFCPTTIRSHFQHVFLVVRAHTPCTPHTTYRVAVSRTQDTPAFGPALPAGGGPF 497
Query: 356 RKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETL 397
+F+ FLL K +N E A A +F + RTR L+ L
Sbjct: 498 AANADFRAFLLAKALNGEQAAGHARQFHAMATRTRQQYLQDL 539
>gi|206725523 signal-induced proliferation-associated protein 1
[Homo sapiens]
Length = 1042
Score = 210 bits (535), Expect = 3e-54
Identities = 132/342 (38%), Positives = 185/342 (54%), Gaps = 14/342 (4%)
Query: 70 EPLQSPTTKVKLE-CNPTARIYRKHFLGKEHFNYYSLDAALGHLVFSLKYDVI-----GD 123
E Q+ T+ LE + A YRK+F GKEH N++ +D +LG + SL+ + G
Sbjct: 198 EEPQNRTSAYSLEHADLGAGYYRKYFYGKEHQNFFGMDESLGPVAVSLRREEKEGSGGGT 257
Query: 124 QEHLRLLLRT-KCRTYHDVIPISCLTEFPNVVQMAKLVCEDVNVDRFYPVLY-----PKA 177
R+++RT + RT I L P + + E V L PK
Sbjct: 258 LHSYRVIVRTTQLRTLRGTISEDALPPGPPRGLSPRKLLEHVAPQLSPSCLRLGSASPKV 317
Query: 178 SRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQDFK 237
R ++T DE V+S K G++Y + GQ SEEE+++ E PAF++FL LG V+L+ F+
Sbjct: 318 PRTLLTLDEQVLSFQRKVGILYCRAGQGSEEEMYNNQEAGPAFMQFLTLLGDVVRLKGFE 377
Query: 238 GFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAVVF 297
+R LD TGT S+Y +++ EIMFHVST LPYT + QQL RKRHIGNDIV +VF
Sbjct: 378 SYRAQLDTKTDSTGTHSLYTTYQDHEIMFHVSTMLPYTPNNQQQLLRKRHIGNDIVTIVF 437
Query: 298 QDENT-PFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLP-DPAVF 355
Q+ + PF P I S+F H ++VV+A Y+V+V+ D P FGP LP F
Sbjct: 438 QEPGSKPFCPTTIRSHFQHVFLVVRAHTPCTPHTTYRVAVSRTQDTPAFGPALPAGGGPF 497
Query: 356 RKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETL 397
+F+ FLL K +N E A A +F + RTR L+ L
Sbjct: 498 AANADFRAFLLAKALNGEQAAGHARQFHAMATRTRQQYLQDL 539
>gi|118600961 akt substrate AS250 [Homo sapiens]
Length = 1873
Score = 81.6 bits (200), Expect = 2e-15
Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 19/234 (8%)
Query: 176 KASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQD 235
K R + D K V Y GQ + + S S A+ +F+ LG +V L
Sbjct: 1630 KLLRELKNLDSRQCRETHKIAVFYIAEGQEDKCSILSNERGSQAYEDFVAGLGWEVDLST 1689
Query: 236 FKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAV 295
GF GGL +G TG + Y E++FHVST++P ++ D ++ RH+GND V +
Sbjct: 1690 HCGFMGGLQ-RNGSTGQTAPYYATSTVEVIFHVSTRMP-SDSDDSLTKKLRHLGNDEVHI 1747
Query: 296 VFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVF 355
V+ + + + +I + F +++ ++ +++T + +VPFFGP V
Sbjct: 1748 VWSEHSRDYRRGIIPTAFGDVSIIIYP----MKNHMFFIAITKKPEVPFFGPLFDGAIVS 1803
Query: 356 RKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYEELHIHSQSMM 409
K LL L+ A C A + K L ++ YEE ++ ++++
Sbjct: 1804 GK-------LLPSLVCA--TCINASRAVK----CLIPLYQSFYEERALYLEAII 1844
>gi|51230412 GTPase activating Rap/RanGAP domain-like 1 isoform 2
[Homo sapiens]
Length = 2083
Score = 77.0 bits (188), Expect = 5e-14
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 8/224 (3%)
Query: 176 KASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQD 235
K R + D K V Y GQ + + + S A+ +F+ LG +V L +
Sbjct: 1791 KLLRELRNLDSRQCRETHKIAVFYVAEGQEDKHSILTNTGGSQAYEDFVAGLGWEVNLTN 1850
Query: 236 FKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAV 295
GF GGL + TG + Y E++FHVST++P ++ D ++ RH+GND V +
Sbjct: 1851 HCGFMGGLQ-KNKSTGLTTPYFATSTVEVIFHVSTRMP-SDSDDSLTKKLRHLGNDEVHI 1908
Query: 296 VFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVF 355
V+ + + +I + F +V+ ++ + + + +VPFFG PL D A+
Sbjct: 1909 VWSEHTRDYRRGIIPTEFGDVLIVIYP----MKNHMFSIQIMKKPEVPFFG-PLFDGAIV 1963
Query: 356 RKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYE 399
G + INA A + RA L+T+ +
Sbjct: 1964 -NGKVLPIMVRATAINASRALKSLIPLYQNFYEERARYLQTIVQ 2006
>gi|51226124 GTPase activating Rap/RanGAP domain-like 1 isoform 1
[Homo sapiens]
Length = 2036
Score = 77.0 bits (188), Expect = 5e-14
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 8/224 (3%)
Query: 176 KASRLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEESPAFVEFLEFLGQKVKLQD 235
K R + D K V Y GQ + + + S A+ +F+ LG +V L +
Sbjct: 1791 KLLRELRNLDSRQCRETHKIAVFYVAEGQEDKHSILTNTGGSQAYEDFVAGLGWEVNLTN 1850
Query: 236 FKGFRGGLDVTHGQTGTESVYCNFRNKEIMFHVSTKLPYTEGDAQQLQRKRHIGNDIVAV 295
GF GGL + TG + Y E++FHVST++P ++ D ++ RH+GND V +
Sbjct: 1851 HCGFMGGLQ-KNKSTGLTTPYFATSTVEVIFHVSTRMP-SDSDDSLTKKLRHLGNDEVHI 1908
Query: 296 VFQDENTPFVPDMIASNFLHAYVVVQAEGGGPDGPLYKVSVTARDDVPFFGPPLPDPAVF 355
V+ + + +I + F +V+ ++ + + + +VPFFG PL D A+
Sbjct: 1909 VWSEHTRDYRRGIIPTEFGDVLIVIYP----MKNHMFSIQIMKKPEVPFFG-PLFDGAIV 1963
Query: 356 RKGPEFQEFLLTKLINAEYACYKAEKFAKLEERTRAALLETLYE 399
G + INA A + RA L+T+ +
Sbjct: 1964 -NGKVLPIMVRATAINASRALKSLIPLYQNFYEERARYLQTIVQ 2006
>gi|116256350 tuberous sclerosis 2 isoform 4 [Homo sapiens]
Length = 1740
Score = 73.2 bits (178), Expect = 8e-13
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 171 PVLYPKAS----RLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEE-SPAFVEFLE 225
P+L P S R + D+ + K V+Y GQ++ E +NE S + EFL
Sbjct: 1450 PILLPNESQSFERSVQLLDQIPSYDTHKIAVLYVGEGQSNSELAILSNEHGSYRYTEFLT 1509
Query: 226 FLGQKVKLQDF---KGFRGGLDVTHGQTGTESVYCNFRN-KEIMFHVSTKLPYTEGDAQQ 281
LG+ ++L+D K + GGLDV G+ G + YC + + +FH++T +P + D +
Sbjct: 1510 GLGRLIELKDCQPDKVYLGGLDVC-GEDG-QFTYCWHDDIMQAVFHIATLMPTKDVDKHR 1567
Query: 282 LQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVV 320
+KRH+GND V++V+ D F I F +V+V
Sbjct: 1568 CDKKRHLGNDFVSIVYNDSGEDFKLGTIKGQFNFVHVIV 1606
>gi|116256352 tuberous sclerosis 2 isoform 1 [Homo sapiens]
Length = 1807
Score = 73.2 bits (178), Expect = 8e-13
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 171 PVLYPKAS----RLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEE-SPAFVEFLE 225
P+L P S R + D+ + K V+Y GQ++ E +NE S + EFL
Sbjct: 1517 PILLPNESQSFERSVQLLDQIPSYDTHKIAVLYVGEGQSNSELAILSNEHGSYRYTEFLT 1576
Query: 226 FLGQKVKLQDF---KGFRGGLDVTHGQTGTESVYCNFRN-KEIMFHVSTKLPYTEGDAQQ 281
LG+ ++L+D K + GGLDV G+ G + YC + + +FH++T +P + D +
Sbjct: 1577 GLGRLIELKDCQPDKVYLGGLDVC-GEDG-QFTYCWHDDIMQAVFHIATLMPTKDVDKHR 1634
Query: 282 LQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVV 320
+KRH+GND V++V+ D F I F +V+V
Sbjct: 1635 CDKKRHLGNDFVSIVYNDSGEDFKLGTIKGQFNFVHVIV 1673
>gi|167412124 tuberous sclerosis 2 isoform 5 [Homo sapiens]
Length = 1784
Score = 73.2 bits (178), Expect = 8e-13
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 171 PVLYPKAS----RLIVTFDEHVISNNFKFGVIYQKLGQTSEEELFSTNEE-SPAFVEFLE 225
P+L P S R + D+ + K V+Y GQ++ E +NE S + EFL
Sbjct: 1494 PILLPNESQSFERSVQLLDQIPSYDTHKIAVLYVGEGQSNSELAILSNEHGSYRYTEFLT 1553
Query: 226 FLGQKVKLQDF---KGFRGGLDVTHGQTGTESVYCNFRN-KEIMFHVSTKLPYTEGDAQQ 281
LG+ ++L+D K + GGLDV G+ G + YC + + +FH++T +P + D +
Sbjct: 1554 GLGRLIELKDCQPDKVYLGGLDVC-GEDG-QFTYCWHDDIMQAVFHIATLMPTKDVDKHR 1611
Query: 282 LQRKRHIGNDIVAVVFQDENTPFVPDMIASNFLHAYVVV 320
+KRH+GND V++V+ D F I F +V+V
Sbjct: 1612 CDKKRHLGNDFVSIVYNDSGEDFKLGTIKGQFNFVHVIV 1650
>gi|29570782 additional sex combs like 1 [Homo sapiens]
Length = 1541
Score = 42.0 bits (97), Expect = 0.002
Identities = 52/201 (25%), Positives = 81/201 (40%), Gaps = 37/201 (18%)
Query: 500 VEESLIVPGKS-------PTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTPDSG 552
++ L VPG+S TR++ G F R + + + +K+ES AG
Sbjct: 382 IKSGLCVPGESVRIQRGPATRQRDGHFKKRSRPDLRTRARRNLYKKQESEQAGVAKDAKS 441
Query: 553 HVSQEPKSENSSTQ------SSPEMPTTKNRA----------ETAAQRAEALKD-FSRSS 595
S P ++ + SSP +P T + A E+ A R +A D +R+S
Sbjct: 442 VASDVPLYKDGEAKTDPAGLSSPHLPGTSSAAPDLEGPEFPVESVASRIQAEPDNLARAS 501
Query: 596 SSASSFASVVEET---EGVDGEDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGSSP 652
+S S+ +ET E D + E +S+ P K+ LED S + S
Sbjct: 502 ASPDRIPSLPQETVDQEPKDQKRKSFEQAASASFPEKKPR------LEDRQSFRNTIESV 555
Query: 653 DAGK----LGDPACPEIKIQL 669
K +P P I+IQL
Sbjct: 556 HTEKPQPTKEEPKVPPIRIQL 576
>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
precursor [Homo sapiens]
Length = 513
Score = 40.4 bits (93), Expect = 0.005
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 11/175 (6%)
Query: 501 EESLIVPGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKS 560
EES V G S + S+ +S+ E + V E R P P + +V + S
Sbjct: 328 EESQNVDGPSSESSQEANLSSQENSSESQEEV--VSESRGDNP----DPTTSYVEDQEDS 381
Query: 561 ENSSTQSSPEMPTTKN--RAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGL 618
++S SS + +K+ R E A + +FS S + + + EG+ +
Sbjct: 382 DSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQ-EGLQSHSSSA 440
Query: 619 ESVSSSGTPHKRDSFIY--STWLEDSVSTTSGGSSPDAGKLGDPACPEIKIQLEA 671
ES S + DS S EDS ST S SS + G+L + K+ ++A
Sbjct: 441 ESQSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEEDGQLKNIEIESRKLTVDA 495
>gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2
precursor [Homo sapiens]
Length = 497
Score = 40.4 bits (93), Expect = 0.005
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 11/175 (6%)
Query: 501 EESLIVPGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKS 560
EES V G S + S+ +S+ E + V E R P P + +V + S
Sbjct: 312 EESQNVDGPSSESSQEANLSSQENSSESQEEV--VSESRGDNP----DPTTSYVEDQEDS 365
Query: 561 ENSSTQSSPEMPTTKN--RAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGL 618
++S SS + +K+ R E A + +FS S + + + EG+ +
Sbjct: 366 DSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQ-EGLQSHSSSA 424
Query: 619 ESVSSSGTPHKRDSFIY--STWLEDSVSTTSGGSSPDAGKLGDPACPEIKIQLEA 671
ES S + DS S EDS ST S SS + G+L + K+ ++A
Sbjct: 425 ESQSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEEDGQLKNIEIESRKLTVDA 479
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 40.0 bits (92), Expect = 0.007
Identities = 73/297 (24%), Positives = 102/297 (34%), Gaps = 50/297 (16%)
Query: 387 ERTRAALLETLYEELHIHSQSMMGLGGDEDKMENGSGGGGFF----ESFKRVIRSRSQSM 442
E T A+L +YEE+ SQS++ +M S F + K+ + + S M
Sbjct: 1246 EGTPASLGAAVYEEILQTSQSIV-------RMRQASSRDLAFAEDKKKEKQFLNAESAYM 1298
Query: 443 DAMGLSNKKPNTVSTSHSGSFAPNNPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEE 502
D M + G P AA +S P S S GR I V +
Sbjct: 1299 DPM-----------KQNGGPLTPGTSPTQLAAPVSFSTPTSSDSSGGR---VIPDVRVTQ 1344
Query: 503 SLIVPGKSPTRKKSGPFG-SRRSSAIGIENIQ--------EVQEKRESPPAGQKTPDSGH 553
+ P + S P S S IG+ Q V P G TP S
Sbjct: 1345 HFAKETQDPLKLHSSPASPSSASKEIGMPFSQGPGTPATTAVAPCPAGLPRGYMTPASPA 1404
Query: 554 VSQEPKSENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDG 613
S+ S +S+ S PTT N +A S +A+ A+ + DG
Sbjct: 1405 GSERSPSPSSTAHSYGHSPTTANYGSQTEDLPQA-----PSGLAAAGRAAREKPLSASDG 1459
Query: 614 EDTGLESVSSSGTPHKRDSFIYSTWLEDSVSTTSGGSSP--DAGKLGDPACPEIKIQ 668
E GTP ++ Y +S +S SP GK+G A E Q
Sbjct: 1460 E---------GGTPQPSRAYSYFASSSPPLSPSSPSESPTFSPGKMGPRATAEFSTQ 1507
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 39.7 bits (91), Expect = 0.009
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 507 PGKSPTRKKSGPFGSRRSSAIGIENIQEVQEKRESPPAGQKTP-DSGHVSQEPKSENSST 565
P K ++KK G + A E+ Q V+EK + KTP S H +++ K SS+
Sbjct: 126 PLKKDSKKKGGSY------ATNPESKQIVEEKTKRQNEADKTPLKSSHENEQSKKSKSSS 179
Query: 566 QSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASSF 601
+++PE +K ++ +Q+ + KD S + + F
Sbjct: 180 ETNPESQNSKTVSKNCSQKDK--KDSKNSKKTNTEF 213
>gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2
[Homo sapiens]
Length = 1481
Score = 39.7 bits (91), Expect = 0.009
Identities = 54/226 (23%), Positives = 89/226 (39%), Gaps = 29/226 (12%)
Query: 414 DEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKA 473
D K ++ G + + + + SRS + K P + S S S P ++
Sbjct: 229 DSSKQDDSPSGASYGQDYD-LSPSRSHTSSNYDSYKKSPGSTSRRQSVSPPYKEPSAYQS 287
Query: 474 AGISLLIPG------KSASRFGRRGSAIGIGTVEESLIVPGKSPT----RKKSGPFGSRR 523
+ S P +S S + RR S+ + E S G+SP+ R+ S PF S+R
Sbjct: 288 STRS---PSPYSRRQRSVSPYSRRRSS----SYERSGSYSGRSPSPYGRRRSSSPFLSKR 340
Query: 524 SSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSP-EMP--------TT 574
S + ++ + R PA + S + S + + SP +P +
Sbjct: 341 SLSRSPLPSRKSMKSRSRSPAYSRHSSSHSKKKRSSSRSRHSSISPVRLPLNSSLGAELS 400
Query: 575 KNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLES 620
+ + E AA A A D S S +E V+ +D+GLES
Sbjct: 401 RKKKERAAAAAAAKMDGKESKGSPVFLPR--KENSSVEAKDSGLES 444
>gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1
[Homo sapiens]
Length = 1490
Score = 39.7 bits (91), Expect = 0.009
Identities = 54/226 (23%), Positives = 89/226 (39%), Gaps = 29/226 (12%)
Query: 414 DEDKMENGSGGGGFFESFKRVIRSRSQSMDAMGLSNKKPNTVSTSHSGSFAPNNPDLAKA 473
D K ++ G + + + + SRS + K P + S S S P ++
Sbjct: 229 DSSKQDDSPSGASYGQDYD-LSPSRSHTSSNYDSYKKSPGSTSRRQSVSPPYKEPSAYQS 287
Query: 474 AGISLLIPG------KSASRFGRRGSAIGIGTVEESLIVPGKSPT----RKKSGPFGSRR 523
+ S P +S S + RR S+ + E S G+SP+ R+ S PF S+R
Sbjct: 288 STRS---PSPYSRRQRSVSPYSRRRSS----SYERSGSYSGRSPSPYGRRRSSSPFLSKR 340
Query: 524 SSAIGIENIQEVQEKRESPPAGQKTPDSGHVSQEPKSENSSTQSSP-EMP--------TT 574
S + ++ + R PA + S + S + + SP +P +
Sbjct: 341 SLSRSPLPSRKSMKSRSRSPAYSRHSSSHSKKKRSSSRSRHSSISPVRLPLNSSLGAELS 400
Query: 575 KNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLES 620
+ + E AA A A D S S +E V+ +D+GLES
Sbjct: 401 RKKKERAAAAAAAKMDGKESKGSPVFLPR--KENSSVEAKDSGLES 444
>gi|20070163 voltage-dependent calcium channel alpha 1G subunit
isoform 1 [Homo sapiens]
Length = 2377
Score = 38.5 bits (88), Expect = 0.021
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 28/186 (15%)
Query: 452 PNTVSTSHSGSFAPN------NPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLI 505
P + TS SGS P +P A+++ S P +AS + R S+ SL
Sbjct: 1064 PASRRTSSSGSAEPGAAHEMKSPPSARSSPHS---PWSAASSWTSRRSS------RNSL- 1113
Query: 506 VPGKSPTRKKSGPFGSRRSSAIG----IENIQEVQEKRESPPAGQKTPDSGHVSQEPKS- 560
G++P+ K+ P G RRS G ++ +E E+ + PAG G + +E KS
Sbjct: 1114 --GRAPSLKRRSPSGERRSLLSGEGQESQDEEESSEEERASPAGSDHRHRGSLEREAKSS 1171
Query: 561 -ENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLE 619
+ T P + T + +A++ +D + S+S ++ + +DG+D E
Sbjct: 1172 FDLPDTLQVPGLHRTASGRGSASEH----QDCNGKSASGRLARALRPDDPPLDGDDADDE 1227
Query: 620 SVSSSG 625
S G
Sbjct: 1228 GNLSKG 1233
>gi|38505294 voltage-dependent calcium channel alpha 1G subunit
isoform 15 [Homo sapiens]
Length = 1555
Score = 38.5 bits (88), Expect = 0.021
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 28/186 (15%)
Query: 452 PNTVSTSHSGSFAPN------NPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLI 505
P + TS SGS P +P A+++ S P +AS + R S+ SL
Sbjct: 1064 PASRRTSSSGSAEPGAAHEMKSPPSARSSPHS---PWSAASSWTSRRSS------RNSL- 1113
Query: 506 VPGKSPTRKKSGPFGSRRSSAIG----IENIQEVQEKRESPPAGQKTPDSGHVSQEPKS- 560
G++P+ K+ P G RRS G ++ +E E+ + PAG G + +E KS
Sbjct: 1114 --GRAPSLKRRSPSGERRSLLSGEGQESQDEEESSEEERASPAGSDHRHRGSLEREAKSS 1171
Query: 561 -ENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLE 619
+ T P + T + +A++ +D + S+S ++ + +DG+D E
Sbjct: 1172 FDLPDTLQVPGLHRTASGRGSASEH----QDCNGKSASGRLARALRPDDPPLDGDDADDE 1227
Query: 620 SVSSSG 625
S G
Sbjct: 1228 GNLSKG 1233
>gi|38505292 voltage-dependent calcium channel alpha 1G subunit
isoform 3 [Homo sapiens]
Length = 2343
Score = 38.5 bits (88), Expect = 0.021
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 28/186 (15%)
Query: 452 PNTVSTSHSGSFAPN------NPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLI 505
P + TS SGS P +P A+++ S P +AS + R S+ SL
Sbjct: 1041 PASRRTSSSGSAEPGAAHEMKSPPSARSSPHS---PWSAASSWTSRRSS------RNSL- 1090
Query: 506 VPGKSPTRKKSGPFGSRRSSAIG----IENIQEVQEKRESPPAGQKTPDSGHVSQEPKS- 560
G++P+ K+ P G RRS G ++ +E E+ + PAG G + +E KS
Sbjct: 1091 --GRAPSLKRRSPSGERRSLLSGEGQESQDEEESSEEERASPAGSDHRHRGSLEREAKSS 1148
Query: 561 -ENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLE 619
+ T P + T + +A++ +D + S+S ++ + +DG+D E
Sbjct: 1149 FDLPDTLQVPGLHRTASGRGSASEH----QDCNGKSASGRLARALRPDDPPLDGDDADDE 1204
Query: 620 SVSSSG 625
S G
Sbjct: 1205 GNLSKG 1210
>gi|38505290 voltage-dependent calcium channel alpha 1G subunit
isoform 13 [Homo sapiens]
Length = 2243
Score = 38.5 bits (88), Expect = 0.021
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 28/186 (15%)
Query: 452 PNTVSTSHSGSFAPN------NPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLI 505
P + TS SGS P +P A+++ S P +AS + R S+ SL
Sbjct: 1041 PASRRTSSSGSAEPGAAHEMKSPPSARSSPHS---PWSAASSWTSRRSS------RNSL- 1090
Query: 506 VPGKSPTRKKSGPFGSRRSSAIG----IENIQEVQEKRESPPAGQKTPDSGHVSQEPKS- 560
G++P+ K+ P G RRS G ++ +E E+ + PAG G + +E KS
Sbjct: 1091 --GRAPSLKRRSPSGERRSLLSGEGQESQDEEESSEEERASPAGSDHRHRGSLEREAKSS 1148
Query: 561 -ENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLE 619
+ T P + T + +A++ +D + S+S ++ + +DG+D E
Sbjct: 1149 FDLPDTLQVPGLHRTASGRGSASEH----QDCNGKSASGRLARALRPDDPPLDGDDADDE 1204
Query: 620 SVSSSG 625
S G
Sbjct: 1205 GNLSKG 1210
>gi|38505288 voltage-dependent calcium channel alpha 1G subunit
isoform 12 [Homo sapiens]
Length = 2250
Score = 38.5 bits (88), Expect = 0.021
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 28/186 (15%)
Query: 452 PNTVSTSHSGSFAPN------NPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLI 505
P + TS SGS P +P A+++ S P +AS + R S+ SL
Sbjct: 1041 PASRRTSSSGSAEPGAAHEMKSPPSARSSPHS---PWSAASSWTSRRSS------RNSL- 1090
Query: 506 VPGKSPTRKKSGPFGSRRSSAIG----IENIQEVQEKRESPPAGQKTPDSGHVSQEPKS- 560
G++P+ K+ P G RRS G ++ +E E+ + PAG G + +E KS
Sbjct: 1091 --GRAPSLKRRSPSGERRSLLSGEGQESQDEEESSEEERASPAGSDHRHRGSLEREAKSS 1148
Query: 561 -ENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLE 619
+ T P + T + +A++ +D + S+S ++ + +DG+D E
Sbjct: 1149 FDLPDTLQVPGLHRTASGRGSASEH----QDCNGKSASGRLARALRPDDPPLDGDDADDE 1204
Query: 620 SVSSSG 625
S G
Sbjct: 1205 GNLSKG 1210
>gi|38505286 voltage-dependent calcium channel alpha 1G subunit
isoform 10 [Homo sapiens]
Length = 2266
Score = 38.5 bits (88), Expect = 0.021
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 28/186 (15%)
Query: 452 PNTVSTSHSGSFAPN------NPDLAKAAGISLLIPGKSASRFGRRGSAIGIGTVEESLI 505
P + TS SGS P +P A+++ S P +AS + R S+ SL
Sbjct: 1064 PASRRTSSSGSAEPGAAHEMKSPPSARSSPHS---PWSAASSWTSRRSS------RNSL- 1113
Query: 506 VPGKSPTRKKSGPFGSRRSSAIG----IENIQEVQEKRESPPAGQKTPDSGHVSQEPKS- 560
G++P+ K+ P G RRS G ++ +E E+ + PAG G + +E KS
Sbjct: 1114 --GRAPSLKRRSPSGERRSLLSGEGQESQDEEESSEEERASPAGSDHRHRGSLEREAKSS 1171
Query: 561 -ENSSTQSSPEMPTTKNRAETAAQRAEALKDFSRSSSSASSFASVVEETEGVDGEDTGLE 619
+ T P + T + +A++ +D + S+S ++ + +DG+D E
Sbjct: 1172 FDLPDTLQVPGLHRTASGRGSASEH----QDCNGKSASGRLARALRPDDPPLDGDDADDE 1227
Query: 620 SVSSSG 625
S G
Sbjct: 1228 GNLSKG 1233
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,979,012
Number of Sequences: 37866
Number of extensions: 1386422
Number of successful extensions: 4374
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 4076
Number of HSP's gapped (non-prelim): 338
length of query: 681
length of database: 18,247,518
effective HSP length: 109
effective length of query: 572
effective length of database: 14,120,124
effective search space: 8076710928
effective search space used: 8076710928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.