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Search of human proteins with 115527106
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|115527106 vitelliform macular dystrophy 2-like 3 isoform 2
[Homo sapiens]
(455 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|115527106 vitelliform macular dystrophy 2-like 3 isoform 2 [H... 934 0.0
gi|115527104 vitelliform macular dystrophy 2-like 3 isoform 1 [H... 910 0.0
gi|212720889 bestrophin 1 isoform 2 [Homo sapiens] 184 1e-46
gi|4759310 bestrophin 1 isoform 1 [Homo sapiens] 184 1e-46
gi|119703742 vitelliform macular dystrophy 2-like 1 [Homo sapiens] 172 7e-43
gi|23397576 bestrophin 4 [Homo sapiens] 111 2e-24
gi|38327612 PDZ and LIM domain 2 isoform 3 [Homo sapiens] 43 5e-04
gi|28866957 PDZ and LIM domain 2 isoform 1 [Homo sapiens] 43 5e-04
gi|21361888 PDZ and LIM domain 2 isoform 2 [Homo sapiens] 43 5e-04
gi|167736355 mucin 4 isoform a [Homo sapiens] 42 0.002
gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 38 0.022
gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens] 38 0.022
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 38 0.022
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 38 0.022
gi|161019170 mucin 5AC [Homo sapiens] 37 0.048
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 37 0.048
gi|156104862 ankyrin repeat domain 38 [Homo sapiens] 36 0.063
gi|239749340 PREDICTED: hypothetical protein XP_002347000 [Homo ... 36 0.082
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 36 0.082
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 36 0.082
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 34 0.24
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 34 0.24
gi|119943102 CREB binding protein isoform b [Homo sapiens] 34 0.24
gi|119943104 CREB binding protein isoform a [Homo sapiens] 34 0.24
gi|166795252 hypothetical protein LOC23359 [Homo sapiens] 34 0.31
gi|116284392 mucin 2 precursor [Homo sapiens] 34 0.31
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 34 0.31
gi|87196343 PDZ domain containing 2 [Homo sapiens] 34 0.31
gi|167234419 thyroid hormone receptor associated protein 3 [Homo... 34 0.31
gi|157311635 FAM83H [Homo sapiens] 33 0.41
>gi|115527106 vitelliform macular dystrophy 2-like 3 isoform 2 [Homo
sapiens]
Length = 455
Score = 934 bits (2414), Expect = 0.0
Identities = 455/455 (100%), Positives = 455/455 (100%)
Query: 1 MTTDERKLFNHLKSPHLKYWVPFIWFGNLATKARNEGRIRDSVDLQSLMTEMNRYRSWCS 60
MTTDERKLFNHLKSPHLKYWVPFIWFGNLATKARNEGRIRDSVDLQSLMTEMNRYRSWCS
Sbjct: 1 MTTDERKLFNHLKSPHLKYWVPFIWFGNLATKARNEGRIRDSVDLQSLMTEMNRYRSWCS 60
Query: 61 LLFGYDWVGIPLVYTQVAEQLINPFGEDDDDFETNWCIDRNLQVSLLAVDEMHMSLPKMK 120
LLFGYDWVGIPLVYTQVAEQLINPFGEDDDDFETNWCIDRNLQVSLLAVDEMHMSLPKMK
Sbjct: 61 LLFGYDWVGIPLVYTQVAEQLINPFGEDDDDFETNWCIDRNLQVSLLAVDEMHMSLPKMK 120
Query: 121 KDIYWDDSAARPPYTLAAADYCIPSFLGSTVQMGLSGSDFPDEEWLWDYEKHGHRHSMIR 180
KDIYWDDSAARPPYTLAAADYCIPSFLGSTVQMGLSGSDFPDEEWLWDYEKHGHRHSMIR
Sbjct: 121 KDIYWDDSAARPPYTLAAADYCIPSFLGSTVQMGLSGSDFPDEEWLWDYEKHGHRHSMIR 180
Query: 181 RVKRFLSAHEHPSSPRRRSYRRQTSDSSMFLPRDDLSPARDLLDVPSRNPPRASPTWKKS 240
RVKRFLSAHEHPSSPRRRSYRRQTSDSSMFLPRDDLSPARDLLDVPSRNPPRASPTWKKS
Sbjct: 181 RVKRFLSAHEHPSSPRRRSYRRQTSDSSMFLPRDDLSPARDLLDVPSRNPPRASPTWKKS 240
Query: 241 CFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMPLVPEVLITAAEAPVP 300
CFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMPLVPEVLITAAEAPVP
Sbjct: 241 CFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMPLVPEVLITAAEAPVP 300
Query: 301 TSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKETPPGGPSPQTVSASAEE 360
TSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKETPPGGPSPQTVSASAEE
Sbjct: 301 TSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKETPPGGPSPQTVSASAEE 360
Query: 361 NIFNCEEDPGDTFLKRWSLPGFLGSSHTSLGNLSPDPMSSQPALLIDTETSSEISGINIV 420
NIFNCEEDPGDTFLKRWSLPGFLGSSHTSLGNLSPDPMSSQPALLIDTETSSEISGINIV
Sbjct: 361 NIFNCEEDPGDTFLKRWSLPGFLGSSHTSLGNLSPDPMSSQPALLIDTETSSEISGINIV 420
Query: 421 AGSRVSSDMLYLMENLDTKETDIIELNKETEESPK 455
AGSRVSSDMLYLMENLDTKETDIIELNKETEESPK
Sbjct: 421 AGSRVSSDMLYLMENLDTKETDIIELNKETEESPK 455
>gi|115527104 vitelliform macular dystrophy 2-like 3 isoform 1 [Homo
sapiens]
Length = 668
Score = 910 bits (2352), Expect = 0.0
Identities = 455/506 (89%), Positives = 455/506 (89%), Gaps = 51/506 (10%)
Query: 1 MTTDERKLFNHLKSPHLKYWVPFIWFGNLATKARNEGRIRDSVDLQSLMTEMNRYRSWCS 60
MTTDERKLFNHLKSPHLKYWVPFIWFGNLATKARNEGRIRDSVDLQSLMTEMNRYRSWCS
Sbjct: 163 MTTDERKLFNHLKSPHLKYWVPFIWFGNLATKARNEGRIRDSVDLQSLMTEMNRYRSWCS 222
Query: 61 LLFGYDWVGIPLVYTQV------------------------------------------- 77
LLFGYDWVGIPLVYTQV
Sbjct: 223 LLFGYDWVGIPLVYTQVVTLAVYTFFFACLIGRQFLDPTKGYAGHDLDLYIPIFTLLQFF 282
Query: 78 --------AEQLINPFGEDDDDFETNWCIDRNLQVSLLAVDEMHMSLPKMKKDIYWDDSA 129
AEQLINPFGEDDDDFETNWCIDRNLQVSLLAVDEMHMSLPKMKKDIYWDDSA
Sbjct: 283 FYAGWLKVAEQLINPFGEDDDDFETNWCIDRNLQVSLLAVDEMHMSLPKMKKDIYWDDSA 342
Query: 130 ARPPYTLAAADYCIPSFLGSTVQMGLSGSDFPDEEWLWDYEKHGHRHSMIRRVKRFLSAH 189
ARPPYTLAAADYCIPSFLGSTVQMGLSGSDFPDEEWLWDYEKHGHRHSMIRRVKRFLSAH
Sbjct: 343 ARPPYTLAAADYCIPSFLGSTVQMGLSGSDFPDEEWLWDYEKHGHRHSMIRRVKRFLSAH 402
Query: 190 EHPSSPRRRSYRRQTSDSSMFLPRDDLSPARDLLDVPSRNPPRASPTWKKSCFPEGSPTL 249
EHPSSPRRRSYRRQTSDSSMFLPRDDLSPARDLLDVPSRNPPRASPTWKKSCFPEGSPTL
Sbjct: 403 EHPSSPRRRSYRRQTSDSSMFLPRDDLSPARDLLDVPSRNPPRASPTWKKSCFPEGSPTL 462
Query: 250 HFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMPLVPEVLITAAEAPVPTSGGYHHDS 309
HFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMPLVPEVLITAAEAPVPTSGGYHHDS
Sbjct: 463 HFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMPLVPEVLITAAEAPVPTSGGYHHDS 522
Query: 310 ATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKETPPGGPSPQTVSASAEENIFNCEEDP 369
ATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKETPPGGPSPQTVSASAEENIFNCEEDP
Sbjct: 523 ATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKETPPGGPSPQTVSASAEENIFNCEEDP 582
Query: 370 GDTFLKRWSLPGFLGSSHTSLGNLSPDPMSSQPALLIDTETSSEISGINIVAGSRVSSDM 429
GDTFLKRWSLPGFLGSSHTSLGNLSPDPMSSQPALLIDTETSSEISGINIVAGSRVSSDM
Sbjct: 583 GDTFLKRWSLPGFLGSSHTSLGNLSPDPMSSQPALLIDTETSSEISGINIVAGSRVSSDM 642
Query: 430 LYLMENLDTKETDIIELNKETEESPK 455
LYLMENLDTKETDIIELNKETEESPK
Sbjct: 643 LYLMENLDTKETDIIELNKETEESPK 668
>gi|212720889 bestrophin 1 isoform 2 [Homo sapiens]
Length = 604
Score = 184 bits (467), Expect = 1e-46
Identities = 105/252 (41%), Positives = 131/252 (51%), Gaps = 56/252 (22%)
Query: 1 MTTDERKLFNHLKSPHLKYWVPFIWFGNLATKARNEGRIRDSVDLQSLMTEMNRYRSWCS 60
MT E K L PH +WVP++WF NL+ KA GRIRD + LQSL+ EMN R+ C
Sbjct: 103 MTPAEHKQLEKLSLPHNMFWVPWVWFANLSMKAWLGGRIRDPILLQSLLNEMNTLRTQCG 162
Query: 61 LLFGYDWVGIPLVYTQV------------------------------------------- 77
L+ YDW+ IPLVYTQV
Sbjct: 163 HLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPGHELDLVVPVFTFLQFF 222
Query: 78 --------AEQLINPFGEDDDDFETNWCIDRNLQVSLLAVDEMHMSLPKMKKDIYWDDSA 129
AEQLINPFGEDDDDFETNW +DRNLQVSLLAVDEMH LP+M+ D+YW+
Sbjct: 223 FYVGWLKVAEQLINPFGEDDDDFETNWIVDRNLQVSLLAVDEMHQDLPRMEPDMYWNKPE 282
Query: 130 ARPPYTLAAADYCIPSFLGSTVQMGLSGSDFPDEEWLWDYEKHGHRHSMIRRVKRFLSAH 189
+PPYT A+A + SF+GST + L+ + E+ + E H+ I + RFL
Sbjct: 283 PQPPYTAASAQFRRASFMGSTFNISLNKEEM---EFQPNQEDEEDAHAGI--IGRFLGLQ 337
Query: 190 EHPSSPRRRSYR 201
H P R + R
Sbjct: 338 SHDHHPPRANSR 349
>gi|4759310 bestrophin 1 isoform 1 [Homo sapiens]
Length = 585
Score = 184 bits (467), Expect = 1e-46
Identities = 105/252 (41%), Positives = 131/252 (51%), Gaps = 56/252 (22%)
Query: 1 MTTDERKLFNHLKSPHLKYWVPFIWFGNLATKARNEGRIRDSVDLQSLMTEMNRYRSWCS 60
MT E K L PH +WVP++WF NL+ KA GRIRD + LQSL+ EMN R+ C
Sbjct: 163 MTPAEHKQLEKLSLPHNMFWVPWVWFANLSMKAWLGGRIRDPILLQSLLNEMNTLRTQCG 222
Query: 61 LLFGYDWVGIPLVYTQV------------------------------------------- 77
L+ YDW+ IPLVYTQV
Sbjct: 223 HLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPGHELDLVVPVFTFLQFF 282
Query: 78 --------AEQLINPFGEDDDDFETNWCIDRNLQVSLLAVDEMHMSLPKMKKDIYWDDSA 129
AEQLINPFGEDDDDFETNW +DRNLQVSLLAVDEMH LP+M+ D+YW+
Sbjct: 283 FYVGWLKVAEQLINPFGEDDDDFETNWIVDRNLQVSLLAVDEMHQDLPRMEPDMYWNKPE 342
Query: 130 ARPPYTLAAADYCIPSFLGSTVQMGLSGSDFPDEEWLWDYEKHGHRHSMIRRVKRFLSAH 189
+PPYT A+A + SF+GST + L+ + E+ + E H+ I + RFL
Sbjct: 343 PQPPYTAASAQFRRASFMGSTFNISLNKEEM---EFQPNQEDEEDAHAGI--IGRFLGLQ 397
Query: 190 EHPSSPRRRSYR 201
H P R + R
Sbjct: 398 SHDHHPPRANSR 409
>gi|119703742 vitelliform macular dystrophy 2-like 1 [Homo sapiens]
Length = 509
Score = 172 bits (435), Expect = 7e-43
Identities = 95/211 (45%), Positives = 117/211 (55%), Gaps = 52/211 (24%)
Query: 1 MTTDERKLFNHLKSPHLKYWVPFIWFGNLATKARNEGRIRDSVDLQSLMTEMNRYRSWCS 60
MT +ERK F +L S + KYWVP +WF NLA +AR EGRIRD+ L+ L+ E+N +R C
Sbjct: 163 MTREERKKFENLNSSYNKYWVPCVWFSNLAAQARREGRIRDNSALKLLLEELNVFRGKCG 222
Query: 61 LLFGYDWVGIPLVYTQV------------------------------------------- 77
+LF YDW+ +PLVYTQV
Sbjct: 223 MLFHYDWISVPLVYTQVVTIALYSYFLACLIGRQFLDPAQGYKDHDLDLCVPIFTLLQFF 282
Query: 78 --------AEQLINPFGEDDDDFETNWCIDRNLQVSLLAVDEMHMSLPKMKKDIYWDDSA 129
AEQLINPFGEDDDDFETN+ IDRN QVS+LAVDEM+ L ++KD+YWD +
Sbjct: 283 FYAGWLKVAEQLINPFGEDDDDFETNFLIDRNFQVSMLAVDEMYDDLAVLEKDLYWDAAE 342
Query: 130 ARPPYTLAAA-DYCIPSFLGSTVQMGLSGSD 159
AR PYT A PSF GST + L+ D
Sbjct: 343 ARAPYTAATVFQLRQPSFQGSTFDITLAKED 373
>gi|23397576 bestrophin 4 [Homo sapiens]
Length = 473
Score = 111 bits (277), Expect = 2e-24
Identities = 56/91 (61%), Positives = 71/91 (78%), Gaps = 3/91 (3%)
Query: 74 YTQVAEQLINPFGEDDDDFETNWCIDRNLQVSLLAVDEMHMSLPKMKKDIYWDDSAARPP 133
+ +VAEQ+INPFGEDDDDFETN IDRNLQVSLL+VDEM+ +LP +KD YWD+ +PP
Sbjct: 302 WLKVAEQIINPFGEDDDDFETNQLIDRNLQVSLLSVDEMYQNLPPAEKDQYWDEDQPQPP 361
Query: 134 YTLA-AADYCIPSFLGSTVQMGLSGSDFPDE 163
YT+A AA+ PSFLGST + + SD P++
Sbjct: 362 YTVATAAESLRPSFLGSTFNLRM--SDDPEQ 390
Score = 103 bits (256), Expect = 4e-22
Identities = 47/85 (55%), Positives = 60/85 (70%)
Query: 1 MTTDERKLFNHLKSPHLKYWVPFIWFGNLATKARNEGRIRDSVDLQSLMTEMNRYRSWCS 60
M+ +ERK F LKS KYWVP +WF NLA +AR +GRIRD + L L+ E+N+YR+ CS
Sbjct: 163 MSQEERKKFESLKSDFNKYWVPCVWFTNLAAQARRDGRIRDDIALCLLLEELNKYRAKCS 222
Query: 61 LLFGYDWVGIPLVYTQVAEQLINPF 85
+LF YDW+ IPLVYTQV + F
Sbjct: 223 MLFHYDWISIPLVYTQVVTIAVYSF 247
>gi|38327612 PDZ and LIM domain 2 isoform 3 [Homo sapiens]
Length = 278
Score = 43.1 bits (100), Expect = 5e-04
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 25/156 (16%)
Query: 274 QSSVRTSPIKMPLVPEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPM 333
QS +R SP PL ++ + A +P T+G DS+ +L++ F G + TE Q
Sbjct: 66 QSKIRQSP--SPLRLQLDRSQATSPGQTNG----DSSLEVLATRFQGSVRTYTESQSSLR 119
Query: 334 GSILSP---SEKETPPGGPSPQTVSASAEENIFNCEE----DPGDTFLKRWSLPGFLGSS 386
S SP S + P P P + S + E I + PG R S G GS
Sbjct: 120 SSYSSPTSLSPRAGSPFSPPPSSSSLTGEAAISRSFQSLACSPGLPAADRLSYSGRPGSR 179
Query: 387 HTSLGNL----------SPDPMSSQPALLIDTETSS 412
LG SP P SS+P++ D+E S
Sbjct: 180 QAGLGRAGDSAVLVLPPSPGPRSSRPSM--DSEGGS 213
>gi|28866957 PDZ and LIM domain 2 isoform 1 [Homo sapiens]
Length = 366
Score = 43.1 bits (100), Expect = 5e-04
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 25/156 (16%)
Query: 274 QSSVRTSPIKMPLVPEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPM 333
QS +R SP PL ++ + A +P T+G DS+ +L++ F G + TE Q
Sbjct: 66 QSKIRQSP--SPLRLQLDRSQATSPGQTNG----DSSLEVLATRFQGSVRTYTESQSSLR 119
Query: 334 GSILSP---SEKETPPGGPSPQTVSASAEENIFNCEE----DPGDTFLKRWSLPGFLGSS 386
S SP S + P P P + S + E I + PG R S G GS
Sbjct: 120 SSYSSPTSLSPRAGSPFSPPPSSSSLTGEAAISRSFQSLACSPGLPAADRLSYSGRPGSR 179
Query: 387 HTSLGNL----------SPDPMSSQPALLIDTETSS 412
LG SP P SS+P++ D+E S
Sbjct: 180 QAGLGRAGDSAVLVLPPSPGPRSSRPSM--DSEGGS 213
>gi|21361888 PDZ and LIM domain 2 isoform 2 [Homo sapiens]
Length = 352
Score = 43.1 bits (100), Expect = 5e-04
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 25/156 (16%)
Query: 274 QSSVRTSPIKMPLVPEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPM 333
QS +R SP PL ++ + A +P T+G DS+ +L++ F G + TE Q
Sbjct: 66 QSKIRQSP--SPLRLQLDRSQATSPGQTNG----DSSLEVLATRFQGSVRTYTESQSSLR 119
Query: 334 GSILSP---SEKETPPGGPSPQTVSASAEENIFNCEE----DPGDTFLKRWSLPGFLGSS 386
S SP S + P P P + S + E I + PG R S G GS
Sbjct: 120 SSYSSPTSLSPRAGSPFSPPPSSSSLTGEAAISRSFQSLACSPGLPAADRLSYSGRPGSR 179
Query: 387 HTSLGNL----------SPDPMSSQPALLIDTETSS 412
LG SP P SS+P++ D+E S
Sbjct: 180 QAGLGRAGDSAVLVLPPSPGPRSSRPSM--DSEGGS 213
>gi|167736355 mucin 4 isoform a [Homo sapiens]
Length = 5284
Score = 41.6 bits (96), Expect = 0.002
Identities = 56/238 (23%), Positives = 85/238 (35%), Gaps = 48/238 (20%)
Query: 192 PSSPRRRSYRRQTSDSSMFLPRDDLSPARDLLDVPSRNPPRASPTWKKSCFPEGSPTLHF 251
PS + + TS SS P D ++ + PS N T S P+ SP +
Sbjct: 582 PSYSVTQMIKTATSPSSS--PMLDRHTSQQITTAPSTNHSTIHST---STSPQESPAVS- 635
Query: 252 SMGELSTIRETSQTSTLQSLTPQSSVRT---------------SPIKMPLVPEVLITAAE 296
G + T ++ T +S++P + +T S I P +
Sbjct: 636 QRGHTQAPQTTQESQTTRSVSPMTDTKTVTTPGSSFTASGHSPSEIVPQDAPTISAATTF 695
Query: 297 APVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGP--------MGSILSPSEKETPPGG 348
AP PT G+ + T+ L + PS + GP G++ + + PGG
Sbjct: 696 APAPTGDGHTTQAPTTALQA-----APSSHDATLGPSGGTSLSKTGALTLANSVVSTPGG 750
Query: 349 P-----------SPQTVSASAEENIFNCEEDPGDTFLKRWSLPGFLGSSHTSLGNLSP 395
P SP T +A + E G T + S P GS TS G +P
Sbjct: 751 PEGQWTSASASTSPDTAAAMTHTHQAESTEASGQT---QTSEPASSGSRTTSAGTATP 805
>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
Length = 1952
Score = 37.7 bits (86), Expect = 0.022
Identities = 47/206 (22%), Positives = 71/206 (34%), Gaps = 32/206 (15%)
Query: 226 PSRNPPRASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMP 285
PS +P+ S F + S T H S T ++ ++TL + V +SP+
Sbjct: 346 PSSKDTSPAPSGTTSAFVKLSTTYHSSPSSTPTTHFSASSTTLGHSEESTPVHSSPVATA 405
Query: 286 LVPEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKE-- 343
P +A V S YH P T+ P S S +E
Sbjct: 406 TTPPPARSATSGHVEESTAYHR--------------SPGSTQTMHFPESSTTSGHSEESA 451
Query: 344 ------TPPGGPSPQTVSASAEENIFNCEEDPGDT-FLKRWSLPGFLGSSHTSLGNLSPD 396
T +P T +A A + + T F ++ G S + + SPD
Sbjct: 452 TFHGSTTHTKSSTPSTTAALAHTSYHSSLGSTETTHFRDSSTISG--RSEESKASHSSPD 509
Query: 397 -------PMSSQPALLIDTETSSEIS 415
P S P++L+ T S IS
Sbjct: 510 AMATTVLPAGSTPSVLVGDSTPSPIS 535
Score = 35.4 bits (80), Expect = 0.11
Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 28/184 (15%)
Query: 226 PSRNPPRASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMP 285
PS N R +P S F E S T H S + T +++++T + ++ +SP
Sbjct: 702 PSSNDTRPAPPTTTSAFVEPSTTSHGSPSSIPTTHISARSTTSGLVEESTTYHSSPGSTQ 761
Query: 286 LV--PEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKE 343
+ PE T+ T+ H S T +SS PS T + P+
Sbjct: 762 TMHFPESDTTSGRGEESTTS---HSSTTHTISS-----APSTTS------ALVEEPTSYH 807
Query: 344 TPPGG------PSPQTVSASAEENI-FNCEEDPGDTFLKRWSLPGFLGSSHTSLGNLSPD 396
+ PG P T S +EE+I + +D T + LP ++ LG +
Sbjct: 808 SSPGSTATTHFPDSSTTSGRSEESIASHSSQDATGTIV----LPA-RSTNSVLLGESTTS 862
Query: 397 PMSS 400
P+SS
Sbjct: 863 PISS 866
Score = 35.0 bits (79), Expect = 0.14
Identities = 41/171 (23%), Positives = 55/171 (32%), Gaps = 31/171 (18%)
Query: 207 SSMFLPRDDLSPARDLL---------DVPSRNPPRASPTWKKSCFPEGSPTLHFSMGELS 257
SS PR LSPA PS +P S F E S T H S +
Sbjct: 1115 SSTGSPRTTLSPAGSTTRQGESTTFQSWPSSKDTMPAPPTTTSAFVELSTTSHGSPSSIP 1174
Query: 258 TIRETSQTSTLQSLTPQSSVRTSPIKMPLVPEVLITAAEAPVPTSGGYHHDSATSILSSE 317
T ++ ++T ++V +SP+ P + V S YH
Sbjct: 1175 TTHFSASSTTFGRSEESTTVHSSPVAPATTPSPARSTTSGLVEESTAYHS---------- 1224
Query: 318 FTGVQPSKTEQQQGPMGSILSPSEKETPPGGPS--------PQTVSASAEE 360
P T+ P S S +E+ S P T SA EE
Sbjct: 1225 ----SPGSTQTMHFPESSTASGRSEESRTSHSSTTHTISSPPSTTSALVEE 1271
>gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens]
Length = 861
Score = 37.7 bits (86), Expect = 0.022
Identities = 47/206 (22%), Positives = 71/206 (34%), Gaps = 32/206 (15%)
Query: 226 PSRNPPRASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMP 285
PS +P+ S F + S T H S T ++ ++TL + V +SP+
Sbjct: 281 PSSKDTSPAPSGTTSAFVKLSTTYHSSPSSTPTTHFSASSTTLGHSEESTPVHSSPVATA 340
Query: 286 LVPEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKE-- 343
P +A V S YH P T+ P S S +E
Sbjct: 341 TTPPPARSATSGHVEESTAYHR--------------SPGSTQTMHFPESSTTSGHSEESA 386
Query: 344 ------TPPGGPSPQTVSASAEENIFNCEEDPGDT-FLKRWSLPGFLGSSHTSLGNLSPD 396
T +P T +A A + + T F ++ G S + + SPD
Sbjct: 387 TFHGSTTHTKSSTPSTTAALAHTSYHSSLGSTETTHFRDSSTISG--RSEESKASHSSPD 444
Query: 397 -------PMSSQPALLIDTETSSEIS 415
P S P++L+ T S IS
Sbjct: 445 AMATTVLPAGSTPSVLVGDSTPSPIS 470
Score = 32.7 bits (73), Expect = 0.70
Identities = 44/178 (24%), Positives = 67/178 (37%), Gaps = 16/178 (8%)
Query: 226 PSRNPPRASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMP 285
PS R +P S F E S T H S + T +++++T + ++ +SP
Sbjct: 637 PSSKDTRPAPPTTTSAFVEPSTTSHGSPSSIPTTHISARSTTSGLVEESTTYHSSPGSTQ 696
Query: 286 LV--PEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQ-QQGPMGSILSPSEK 342
+ PE T+ T+ H S T +SS PS T + P SP
Sbjct: 697 TMHFPESDTTSGRGEESTTS---HSSTTHTISS-----APSTTSALVEEPTSYHSSPGST 748
Query: 343 ETPPGGPSPQTVSASAEENIFNCEEDPGDTFLKRWSLPGFLGSSHTSLGNLSPDPMSS 400
T S T S E + +D T + LP ++ LG + P+SS
Sbjct: 749 ATTHFPDSSTTSGRSEESTASHSSQDATGTIV----LPA-RSTNSVLLGESTTSPISS 801
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 37.7 bits (86), Expect = 0.022
Identities = 47/206 (22%), Positives = 71/206 (34%), Gaps = 32/206 (15%)
Query: 226 PSRNPPRASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMP 285
PS +P+ S F + S T H S T ++ ++TL + V +SP+
Sbjct: 425 PSSKDTSPAPSGTTSAFVKLSTTYHSSPSSTPTTHFSASSTTLGHSEESTPVHSSPVATA 484
Query: 286 LVPEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKE-- 343
P +A V S YH P T+ P S S +E
Sbjct: 485 TTPPPARSATSGHVEESTAYHR--------------SPGSTQTMHFPESSTTSGHSEESA 530
Query: 344 ------TPPGGPSPQTVSASAEENIFNCEEDPGDT-FLKRWSLPGFLGSSHTSLGNLSPD 396
T +P T +A A + + T F ++ G S + + SPD
Sbjct: 531 TFHGSTTHTKSSTPSTTAALAHTSYHSSLGSTETTHFRDSSTISG--RSEESKASHSSPD 588
Query: 397 -------PMSSQPALLIDTETSSEIS 415
P S P++L+ T S IS
Sbjct: 589 AMATTVLPAGSTPSVLVGDSTPSPIS 614
Score = 35.8 bits (81), Expect = 0.082
Identities = 50/193 (25%), Positives = 75/193 (38%), Gaps = 21/193 (10%)
Query: 240 SCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTS-------------PIKMPL 286
+ FP+ + T S + T +SQ ST +L+P S+ +S + L
Sbjct: 4121 TAFPDSTTTSGLS--QEPTTSHSSQGSTEATLSPGSTTASSLGQQSTTFHSSPGDTETTL 4178
Query: 287 VPEVLITA----AEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSEK 342
+P+ IT+ A P +S G H + T SS TG+Q T Q P S +PS
Sbjct: 4179 LPDDTITSGLVEASTPTHSSTGSLHTTLTPA-SSTSTGLQEESTTFQSWPSSSDTTPSPP 4237
Query: 343 ETPPGGPSPQTVSASAEENIFNCEEDPGDTFLKRWSLPGFLGSSHTSLGNLSPDPMSSQP 402
T T S + T L R + SS + G + P S
Sbjct: 4238 STTAVPVEVSTTYHSRPSSTPTTHFSASSTTLGRSEESTTVHSSPGATGT-ALFPTRSAT 4296
Query: 403 ALLIDTETSSEIS 415
++L+ T+S IS
Sbjct: 4297 SVLVGEPTTSPIS 4309
Score = 35.0 bits (79), Expect = 0.14
Identities = 37/155 (23%), Positives = 51/155 (32%), Gaps = 23/155 (14%)
Query: 226 PSRNPPRASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMP 285
PS +P S F E S T H S T ++ ++TL ++V +SP+
Sbjct: 1836 PSSKDTMPAPPTTTSAFVELSTTSHGSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATA 1895
Query: 286 LVPEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKETP 345
P + V S YH P T+ P S S +E+
Sbjct: 1896 TTPSPARSTTSGLVEESTAYHS--------------SPGSTQTMHFPESSTASGRSEESR 1941
Query: 346 PGGPS--------PQTVSASAEENIFNCEEDPGDT 372
S P T SA EE + PG T
Sbjct: 1942 TSHSSTTHTISSPPSTTSALVEEPT-SYHSSPGST 1975
Score = 34.7 bits (78), Expect = 0.18
Identities = 37/147 (25%), Positives = 54/147 (36%), Gaps = 7/147 (4%)
Query: 226 PSRNPPRASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMP 285
P+ +P S F E S T H S T ++ ++TL ++V +SP+
Sbjct: 4476 PNSKDTTPAPPTTTSAFVELSTTSHGSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATA 4535
Query: 286 LVPEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKETP 345
P + V S YH +S S++ S T +G + S T
Sbjct: 4536 TTPSPARSTTSGLVEESTTYH----SSPGSTQTMHFPESNTTSGRGEESTTSHSSTTHTI 4591
Query: 346 PGGPSPQTVSASAEENIFNCEEDPGDT 372
PS T SA EE + PG T
Sbjct: 4592 SSAPS--TTSALVEEPT-SYHSSPGST 4615
Score = 34.3 bits (77), Expect = 0.24
Identities = 37/147 (25%), Positives = 54/147 (36%), Gaps = 7/147 (4%)
Query: 226 PSRNPPRASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMP 285
P+ +P S F E S T H S T ++ ++TL ++V +SP+
Sbjct: 3393 PNSKDTTPAPPTTTSAFVELSTTSHGSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATA 3452
Query: 286 LVPEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKETP 345
P + V S YH +S S++ S T +G + S T
Sbjct: 3453 TTPSPARSTTSGLVEESTTYH----SSPGSTQTMHFPESDTTSGRGEESTTSHSSTTHTI 3508
Query: 346 PGGPSPQTVSASAEENIFNCEEDPGDT 372
PS T SA EE + PG T
Sbjct: 3509 SSAPS--TTSALVEEPT-SYHSSPGST 3532
Score = 32.7 bits (73), Expect = 0.70
Identities = 43/169 (25%), Positives = 63/169 (37%), Gaps = 13/169 (7%)
Query: 226 PSRNPPRASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMP 285
PS R +P S F E S T H S + T +++++T + ++ +SP
Sbjct: 781 PSSKDTRPAPPTTTSAFVEPSTTSHGSPSSIPTTHISARSTTSGLVEESTTYHSSPGSTQ 840
Query: 286 LV--PEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQ-QQGPMGSILSPSEK 342
+ PE T+ T+ H S T +SS PS T + P SP
Sbjct: 841 TMHFPESDTTSGRGEESTTS---HSSTTHTISS-----APSTTSALVEEPTSYHSSPGST 892
Query: 343 ETPPGGPSPQTVSASAEENIFNCEEDPGDTFL--KRWSLPGFLGSSHTS 389
T S T S E + +D T + R + LG S TS
Sbjct: 893 ATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTS 941
Score = 31.6 bits (70), Expect = 1.6
Identities = 43/188 (22%), Positives = 61/188 (32%), Gaps = 34/188 (18%)
Query: 193 SSPRRRSYRRQTSDSSMFLPRDDLSPARDLLDV---PSRNPPRASPTWKKSCFP------ 243
S+ RS S SS + PAR V S P +S + + + P
Sbjct: 4624 STTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSGSMETTALPGSTTTP 4683
Query: 244 ---EGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMPLVPEVLITAAEAPVP 300
E S T H S T ++ ++TL ++V +SP+ P + V
Sbjct: 4684 GLSEKSTTFHSSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATATTPSPARSTTSGLVE 4743
Query: 301 TSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKETPPGGPS--------PQ 352
S YH P T+ P S S +E+ S P
Sbjct: 4744 ESTAYHS--------------SPGSTQTMHFPESSTASGRSEESRTSHSSTTHTISSPPS 4789
Query: 353 TVSASAEE 360
T SA EE
Sbjct: 4790 TTSALVEE 4797
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 37.7 bits (86), Expect = 0.022
Identities = 53/209 (25%), Positives = 76/209 (36%), Gaps = 57/209 (27%)
Query: 206 DSSMFLPRDDLSP----ARDLLDVPSRNPPRASPTWKKSC-----------FPEGSP--T 248
D + P LSP + +L VPS + PT K C +PE SP T
Sbjct: 1135 DEVLRYPDRSLSPEDAESLSVLSVPSPDTANQEPTPKSPCGLTEQYLHKDRWPEVSPEDT 1194
Query: 249 LHFSMGELSTIRETSQTSTLQSLTPQS-------------------------SVRTSPIK 283
S+ E S +ETS + + L+P+S S T+P+
Sbjct: 1195 QSLSLSEESPSKETSLDVSSKQLSPESLGTLQFGELNLGKEEMGHLMQAEDTSHHTAPMS 1254
Query: 284 MPLVPEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPM-------GSI 336
+P P AA A PT G + + T I P+ + P G+I
Sbjct: 1255 VP-EPH----AATASPPTDGTTRYSAQTDITDDSLDRKSPASSFSHSTPSGNGKYLPGAI 1309
Query: 337 LSPSEKETPPG---GPSPQTVSASAEENI 362
SP E P SP+++ A E+I
Sbjct: 1310 TSPDEHILTPDSSFSKSPESLPGPALEDI 1338
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 36.6 bits (83), Expect = 0.048
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 233 ASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMPLVPEVLI 292
++P + P +P + + + +T T+ ST + TP S++RT+P P+VL
Sbjct: 2580 STPATSSTATPSSTPGTTWILTKPTTTATTT-ASTGSTATPTSTLRTAP-----PPKVLT 2633
Query: 293 TAAEAPVPTSGGYHHDS----ATSILSSEFTGVQPSKTEQQQGPMGSILSP----SEKET 344
T A P TS S AT++ + T P+ T P S+ + S+ T
Sbjct: 2634 TTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSVTPIPSSSLGTTWTRLSQTTT 2693
Query: 345 PPGGPSPQTVSASAE 359
P S T S++ E
Sbjct: 2694 PTATMSTATPSSTPE 2708
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 36.6 bits (83), Expect = 0.048
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 233 ASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMPLVPEVLI 292
++P + P +P + + + +T T+ ST + TP S++RT+P P+VL
Sbjct: 1890 STPATSSTATPSSTPGTTWILTKPTTTATTT-ASTGSTATPTSTLRTAP-----PPKVLT 1943
Query: 293 TAAEAPVPTSGGYHHDS----ATSILSSEFTGVQPSKTEQQQGPMGSILSP----SEKET 344
T A P TS S AT++ + T P+ T P S+ + S+ T
Sbjct: 1944 TTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSVTPIPSSSLGTTWTRLSQTTT 2003
Query: 345 PPGGPSPQTVSASAE 359
P S T S++ E
Sbjct: 2004 PTATMSTATPSSTPE 2018
>gi|156104862 ankyrin repeat domain 38 [Homo sapiens]
Length = 995
Score = 36.2 bits (82), Expect = 0.063
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 17/151 (11%)
Query: 280 SPIKMPLVPEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGS---- 335
SP + L+P++ + V TS S S LS+E ++ + TEQ+ GP G
Sbjct: 467 SPAERVLLPQLSLPQGPEQVLTS------SVHSFLSTELR-IEEAGTEQEGGPQGGTRGA 519
Query: 336 --ILSPSEKETPPGGPSPQTVSASAEENIFNCEEDPGDTFLKRW--SLPGFLGSSHTSLG 391
L S+++TPP G + + +E+ P D + ++ + L L
Sbjct: 520 GGFLWGSDRKTPPAGREETSSNLPGKEHPGRPPSSPTDATIGQYVKKIQELLQEQWNCLE 579
Query: 392 NLSPDPMSS--QPALLIDTETSSEISGINIV 420
+ P+ S+ QPA + + S +S +N++
Sbjct: 580 HGYPELASAIKQPASKLSSIQSQLLSSLNLL 610
>gi|239749340 PREDICTED: hypothetical protein XP_002347000 [Homo
sapiens]
Length = 349
Score = 35.8 bits (81), Expect = 0.082
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 10/127 (7%)
Query: 225 VPSRNPPRASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQ--SLTPQSSVRTSPI 282
+P R+P +P ++ S FP P+ S R +S+T+ Q SL Q RT+P
Sbjct: 96 LPGRHPSGTAP-FQDSSFPGQHPSRIASFQG----RHSSRTAPFQDGSLPGQHPSRTAPF 150
Query: 283 KMPLVPEVLITAAEAPVP--TSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPS 340
+ +P L + AP T G H S F G PS+ QG S +P
Sbjct: 151 QDDTLPGWL-PSRTAPFQDNTLPGRHPSGTAPFQDSSFPGQHPSRIASFQGRHSSRTAPF 209
Query: 341 EKETPPG 347
+ + PG
Sbjct: 210 QDGSLPG 216
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 35.8 bits (81), Expect = 0.082
Identities = 53/239 (22%), Positives = 93/239 (38%), Gaps = 35/239 (14%)
Query: 148 GSTVQMGLSGSDFPDEEWLWDYEKHGHRHSMIRRVKRFLSAHEHPSSPRRRSYRRQTSD- 206
GS +S P +E K +H ++ K+ ++ P + ++ D
Sbjct: 86 GSRKSRCVSVQTDPTDEIPTKKSKKHKKHKNKKKKKKKEKEKKYKRQPEESESKTKSHDD 145
Query: 207 ------SSMFLPRDDLSPARDLLDVPSRNPPRASPTWKKSCFPEGSPTLHFSMGE---LS 257
S FL + D P+ L++P+R S T + P + + E L
Sbjct: 146 GNIDLESDSFL-KFDSEPSAVALELPTR-AFGPSETNESPAVVLEPPVVSMEVSEPHILE 203
Query: 258 TIRETSQTSTLQS-----LTPQSSVRTSPIKMPLVPEVLITAAEAPVPTSG--------- 303
T++ ++T+ L ++ QS + + P + ++L + A APVPT+
Sbjct: 204 TLKPATKTAELSVVSTSVISEQSEQSVAVMPEPSMTKILDSFAAAPVPTTTLVLKSSEPV 263
Query: 304 ---GYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSE-----KETPPG-GPSPQT 353
+ + + S E T +PSK + P+ +L PSE ETP P P T
Sbjct: 264 VTMSVEYQMKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPST 322
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 35.8 bits (81), Expect = 0.082
Identities = 53/239 (22%), Positives = 93/239 (38%), Gaps = 35/239 (14%)
Query: 148 GSTVQMGLSGSDFPDEEWLWDYEKHGHRHSMIRRVKRFLSAHEHPSSPRRRSYRRQTSD- 206
GS +S P +E K +H ++ K+ ++ P + ++ D
Sbjct: 86 GSRKSRCVSVQTDPTDEIPTKKSKKHKKHKNKKKKKKKEKEKKYKRQPEESESKTKSHDD 145
Query: 207 ------SSMFLPRDDLSPARDLLDVPSRNPPRASPTWKKSCFPEGSPTLHFSMGE---LS 257
S FL + D P+ L++P+R S T + P + + E L
Sbjct: 146 GNIDLESDSFL-KFDSEPSAVALELPTR-AFGPSETNESPAVVLEPPVVSMEVSEPHILE 203
Query: 258 TIRETSQTSTLQS-----LTPQSSVRTSPIKMPLVPEVLITAAEAPVPTSG--------- 303
T++ ++T+ L ++ QS + + P + ++L + A APVPT+
Sbjct: 204 TLKPATKTAELSVVSTSVISEQSEQSVAVMPEPSMTKILDSFAAAPVPTTTLVLKSSEPV 263
Query: 304 ---GYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSE-----KETPPG-GPSPQT 353
+ + + S E T +PSK + P+ +L PSE ETP P P T
Sbjct: 264 VTMSVEYQMKSVLKSVESTSPEPSKIMLVEPPVAKVLEPSETLVVSSETPTEVYPEPST 322
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 34.3 bits (77), Expect = 0.24
Identities = 44/184 (23%), Positives = 71/184 (38%), Gaps = 22/184 (11%)
Query: 193 SSPRRRSYRRQTSDSSMFLPRDDLSPARDLLDVPSRNPPRAS-PTWKKSC---------F 242
S P ++ R + + SS+ P + A +L S + P S PT++ +
Sbjct: 1221 SEPTSQATRGRKNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEPTYQATRGRKNRSSVKT 1280
Query: 243 PEG----SPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMPLVPEVLI-TAAEA 297
PE +P L S + + T +S T SSV+T +P PE+ I T+ +
Sbjct: 1281 PEPVVPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTPETVVPTAPELQISTSTDQ 1340
Query: 298 PVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKETPPGGPSPQTVSAS 357
PV TS + T + K + P+ L PS P P P + +
Sbjct: 1341 PVT-------PKPTSRTTRSRTNMSSVKNPESTVPIAPELPPSTSTEQPVTPEPTSRATR 1393
Query: 358 AEEN 361
+N
Sbjct: 1394 GRKN 1397
Score = 32.3 bits (72), Expect = 0.91
Identities = 41/166 (24%), Positives = 64/166 (38%), Gaps = 16/166 (9%)
Query: 201 RRQTSDSSMFLPR----DDLSPARDLLDVPSRNPPRASPTWKKSCFPEGSPTLHFSMGEL 256
R+ D S P +L P + +R R +P S PE P+ S +
Sbjct: 1079 RKTRQDGSQEAPEAPLSSELEPFHPKPKIRTRKSSRMTPFPATSAAPEPHPST--STAQP 1136
Query: 257 STIRETSQTSTLQSLTPQSSVRTSPIKMPLVPEVL-ITAAEAPVPTSGGYHHDSATSILS 315
T + TSQ + +S T +SSV+T +P PE+ T+ + PV + TS ++
Sbjct: 1137 VTPKPTSQAT--RSRTNRSSVKTPEPVVPTAPELQPSTSTDQPVTS-------EPTSQVT 1187
Query: 316 SEFTGVQPSKTEQQQGPMGSILSPSEKETPPGGPSPQTVSASAEEN 361
KT + P L PS P P + + +N
Sbjct: 1188 RGRKSRSSVKTPETVVPTALELQPSTSTDRPVTSEPTSQATRGRKN 1233
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 34.3 bits (77), Expect = 0.24
Identities = 34/143 (23%), Positives = 47/143 (32%), Gaps = 22/143 (15%)
Query: 226 PSRNPPRASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMP 285
PS +P S F E S T H S T ++ ++TL ++V +SP+
Sbjct: 1323 PSSKDTMPAPPTTTSAFVELSTTSHGSPSSTPTTHFSASSTTLGRSEESTTVHSSPVATA 1382
Query: 286 LVPEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKETP 345
P + V S YH P T+ P S S +E+
Sbjct: 1383 TTPSPARSTTSGLVEESTAYHS--------------SPGSTQTMHFPESSTASGRSEESR 1428
Query: 346 PGGPS--------PQTVSASAEE 360
S P T SA EE
Sbjct: 1429 TSHSSTTHTISSPPSTTSALVEE 1451
Score = 32.7 bits (73), Expect = 0.70
Identities = 43/169 (25%), Positives = 63/169 (37%), Gaps = 13/169 (7%)
Query: 226 PSRNPPRASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMP 285
PS R +P S F E S T H S + T +++++T + ++ +SP
Sbjct: 268 PSSKDTRPAPPTTTSAFVEPSTTSHGSPSSIPTTHISARSTTSGLVEESTTYHSSPGSTQ 327
Query: 286 LV--PEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQ-QQGPMGSILSPSEK 342
+ PE T+ T+ H S T +SS PS T + P SP
Sbjct: 328 TMHFPESDTTSGRGEESTTS---HSSTTHTISS-----APSTTSALVEEPTSYHSSPGST 379
Query: 343 ETPPGGPSPQTVSASAEENIFNCEEDPGDTFL--KRWSLPGFLGSSHTS 389
T S T S E + +D T + R + LG S TS
Sbjct: 380 ATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTS 428
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 34.3 bits (77), Expect = 0.24
Identities = 65/280 (23%), Positives = 101/280 (36%), Gaps = 44/280 (15%)
Query: 147 LGSTVQMGLSGSDFPDEEWLWDYEKHGHRHSMIRRV---KRFLSAHEHPSSPRRRSYRR- 202
+GS M +S S P + H ++M+ + +FL ++ PSS S
Sbjct: 718 MGSVPGMAISPSRMPQPPNMMG----AHTNNMMAQAPAQSQFLPQNQFPSSSGAMSVGMG 773
Query: 203 ----QTSDSSMFLPRDDLSPARDLLDVPSRNPPRASPTWKKSCFPEGSPTLHFSMGELST 258
QT S +P L ++L P+AS + C P LH + ST
Sbjct: 774 QPPAQTGVSQGQVPGAALPNPLNMLG------PQAS---QLPCPPVTQSPLHPTPPPAST 824
Query: 259 IRETSQTSTLQSLTPQSSVRTSPIKMPLVPEVLITAAEAPVPTSGGYHHDSATSILSSEF 318
+ +LQ TP P + ++ + P PT G + T +
Sbjct: 825 ---AAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQ 881
Query: 319 TGVQPSKTEQQQGPM--GSILSP---SEKETPPGGPSPQTVSASAEENIFNCEEDPGDTF 373
Q T Q Q P+ S+ +P ++ TP P T + A +I N
Sbjct: 882 AAAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVHAQPPGTPLSQAAASIDN--------- 932
Query: 374 LKRWSLPGFLGSSHTSLGNLSPDPMSSQPALLIDTETSSE 413
R P + S+ T+ S P P L + TET +E
Sbjct: 933 --RVPTPSSVASAETN----SQQPGPDVPVLEMKTETQAE 966
Score = 30.8 bits (68), Expect = 2.7
Identities = 33/148 (22%), Positives = 56/148 (37%), Gaps = 10/148 (6%)
Query: 226 PSRNPPR-ASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKM 284
P PP+ A+PT + T + G + + +T T T+Q+ Q+ V P
Sbjct: 837 PGMTPPQPAAPTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQAAA-QAQVTPQPQTP 895
Query: 285 PLVPEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKET 344
P V + PT H + LS Q + + + P S ++ +E +
Sbjct: 896 VQPPSVATPQSSQQQPTP--VHAQPPGTPLS------QAAASIDNRVPTPSSVASAETNS 947
Query: 345 PPGGPSPQTVSASAEENIFNCEEDPGDT 372
GP + E + E DPG++
Sbjct: 948 QQPGPDVPVLEMKTETQAEDTEPDPGES 975
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 34.3 bits (77), Expect = 0.24
Identities = 65/280 (23%), Positives = 101/280 (36%), Gaps = 44/280 (15%)
Query: 147 LGSTVQMGLSGSDFPDEEWLWDYEKHGHRHSMIRRV---KRFLSAHEHPSSPRRRSYRR- 202
+GS M +S S P + H ++M+ + +FL ++ PSS S
Sbjct: 756 MGSVPGMAISPSRMPQPPNMMG----AHTNNMMAQAPAQSQFLPQNQFPSSSGAMSVGMG 811
Query: 203 ----QTSDSSMFLPRDDLSPARDLLDVPSRNPPRASPTWKKSCFPEGSPTLHFSMGELST 258
QT S +P L ++L P+AS + C P LH + ST
Sbjct: 812 QPPAQTGVSQGQVPGAALPNPLNMLG------PQAS---QLPCPPVTQSPLHPTPPPAST 862
Query: 259 IRETSQTSTLQSLTPQSSVRTSPIKMPLVPEVLITAAEAPVPTSGGYHHDSATSILSSEF 318
+ +LQ TP P + ++ + P PT G + T +
Sbjct: 863 ---AAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQ 919
Query: 319 TGVQPSKTEQQQGPM--GSILSP---SEKETPPGGPSPQTVSASAEENIFNCEEDPGDTF 373
Q T Q Q P+ S+ +P ++ TP P T + A +I N
Sbjct: 920 AAAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVHAQPPGTPLSQAAASIDN--------- 970
Query: 374 LKRWSLPGFLGSSHTSLGNLSPDPMSSQPALLIDTETSSE 413
R P + S+ T+ S P P L + TET +E
Sbjct: 971 --RVPTPSSVASAETN----SQQPGPDVPVLEMKTETQAE 1004
Score = 30.8 bits (68), Expect = 2.7
Identities = 33/148 (22%), Positives = 56/148 (37%), Gaps = 10/148 (6%)
Query: 226 PSRNPPR-ASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKM 284
P PP+ A+PT + T + G + + +T T T+Q+ Q+ V P
Sbjct: 875 PGMTPPQPAAPTQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTVQAAA-QAQVTPQPQTP 933
Query: 285 PLVPEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKET 344
P V + PT H + LS Q + + + P S ++ +E +
Sbjct: 934 VQPPSVATPQSSQQQPTP--VHAQPPGTPLS------QAAASIDNRVPTPSSVASAETNS 985
Query: 345 PPGGPSPQTVSASAEENIFNCEEDPGDT 372
GP + E + E DPG++
Sbjct: 986 QQPGPDVPVLEMKTETQAEDTEPDPGES 1013
>gi|166795252 hypothetical protein LOC23359 [Homo sapiens]
Length = 539
Score = 33.9 bits (76), Expect = 0.31
Identities = 44/187 (23%), Positives = 73/187 (39%), Gaps = 31/187 (16%)
Query: 182 VKRFLSAHEHPSSPR----RRSYRRQTSDSSMFLPRDDLSPARDLLDVPSRNPPRASPTW 237
++ FL HP++P + QT D F+P P PP P +
Sbjct: 208 LQMFLPQRSHPANPTCVTPHGTVLHQTLDFDEFIP-------------PLPPPPYYPPEY 254
Query: 238 KKSCFPEGSPTLH--FSMGELSTIRETSQTST-----LQSLTPQSSVRTSP--IKMPLVP 288
+ E LH F+ T+ + + S + P +V P ++ +
Sbjct: 255 TCTPSTEAQRGLHLDFAPSPFGTLYDVAINSPGLLYPAELPPPYEAVVGQPPASQVTSIG 314
Query: 289 EVLITAAEAPVPTSGGYHHD---SATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKETP 345
+ + ++ TS G+ +TS+L SE T P + GP+G+ +PSE P
Sbjct: 315 QQVAESSSGDPNTSAGFSTPVPADSTSLLVSEGTAT-PGSSPSPDGPVGAP-APSEPALP 372
Query: 346 PGGPSPQ 352
PG SP+
Sbjct: 373 PGHVSPE 379
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 33.9 bits (76), Expect = 0.31
Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 9/100 (9%)
Query: 263 SQTSTLQSLTPQSSVRTSPI----KMPLVPEVLITAAEAPVPTSGGYHHDSATSILSSEF 318
+QT T +T ++V +P + P + T P PT G + T I ++
Sbjct: 4124 TQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTT 4183
Query: 319 TGVQPSKTEQQQGP-----MGSILSPSEKETPPGGPSPQT 353
P+ T Q GP I + PP +PQT
Sbjct: 4184 VTPTPTPTGTQTGPPTHTSTAPIAELTTSNPPPESSTPQT 4223
Score = 29.3 bits (64), Expect = 7.7
Identities = 32/134 (23%), Positives = 46/134 (34%), Gaps = 11/134 (8%)
Query: 230 PPRASPTWKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMP---- 285
PP +P+ + PT S + I + T+TL T S T+ P
Sbjct: 1597 PPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTT 1656
Query: 286 ------LVPEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSP 339
P IT P PT+ + T + T PS T P+ + +P
Sbjct: 1657 PSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTT-TMTTPSPTTTPSSPITTTTTP 1715
Query: 340 SEKETPPGGPSPQT 353
S TP P+ T
Sbjct: 1716 SSTTTPSPPPTTMT 1729
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 33.9 bits (76), Expect = 0.31
Identities = 37/125 (29%), Positives = 50/125 (40%), Gaps = 13/125 (10%)
Query: 227 SRNPPRASPTWKKS-CFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMP 285
+R P RASPT K S P G+P+ G ST T +ST S T P P
Sbjct: 341 TRTPSRASPTGKPSTASPTGTPSRASPTGSPSTASLTGLSST------ASPTGTPPRASP 394
Query: 286 LVPEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSEKETP 345
+ P P + S TSI + T P++T + P G+ + +P
Sbjct: 395 TGTPSTASLTRKP-PRASPTGMLSRTSITKMDST-ASPTRTPPRASPTGT----PPRASP 448
Query: 346 PGGPS 350
G PS
Sbjct: 449 TGTPS 453
Score = 32.3 bits (72), Expect = 0.91
Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 11/112 (9%)
Query: 226 PSRNPPRASPT-WKKSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRT-SPIK 283
P+R PPRASPT P G+P+ G ST T ST +P S T SP
Sbjct: 430 PTRTPPRASPTGTPPRASPTGTPSRASPTGTQSTASPTGSPST---ASPTGSPSTASPTG 486
Query: 284 MPLVPEVLITAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGS 335
P A+ P+ +T+ ++ + P+ T P GS
Sbjct: 487 SP------SRASLTRTPSRASLTKMESTASITRTPSRASPTWTPSTASPTGS 532
>gi|87196343 PDZ domain containing 2 [Homo sapiens]
Length = 2839
Score = 33.9 bits (76), Expect = 0.31
Identities = 44/204 (21%), Positives = 76/204 (37%), Gaps = 27/204 (13%)
Query: 191 HPSSPRRRSYRRQTSDSS-------MFLPRDDLSPARDLLDVPSRNPPRAS-----PTWK 238
HP R RR S S LP+ SP+ L + +NPP S K
Sbjct: 2384 HPGDAAARLLRRSLSSCSENQSEAGTLLPQMAKSPSIMTLTISRQNPPETSSKGSDSELK 2443
Query: 239 KSCFPEGSPTLHFSMGELSTIRETSQTSTLQSLTPQSSVRTSPIKMPLVPEVLITAAEAP 298
KS P G PT ++ S ++ + +P S + ++ +P++ +E
Sbjct: 2444 KSLGPLGIPTPTMTLA--SPVKRNKSSVRHTQPSPVSRSKLQELRALSMPDLDKLCSED- 2500
Query: 299 VPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGSILSPSE--KETPPGGPSPQTVSA 356
+ +++L + P ++ P G + P + PGG P+T +A
Sbjct: 2501 -------YSAGPSAVLFKTELEITPRRSPGP--PAGGVSCPEKGGNRACPGGSGPKTSAA 2551
Query: 357 SAEENIFNCEEDPGD-TFLKRWSL 379
+ + E D F + WS+
Sbjct: 2552 ETPSSASDTGEAAQDLPFRRSWSV 2575
>gi|167234419 thyroid hormone receptor associated protein 3 [Homo
sapiens]
Length = 955
Score = 33.9 bits (76), Expect = 0.31
Identities = 51/206 (24%), Positives = 78/206 (37%), Gaps = 30/206 (14%)
Query: 184 RFLSAHEHPSSPRRRSYRRQTSDSSMFLP-------RDDLSPARDLLDVPSRNPP--RAS 234
R S H S +R+S + + S S P + D + + S++ +S
Sbjct: 161 RSSSNHSRVESSKRKSAKEKKSSSKDSRPSQAAGDNQGDEAKEQTFSGGTSQDTKASESS 220
Query: 235 PTWKKSCFPEGSPTLHFSMGELSTI-RETSQTSTLQSLTPQS-SVRTSPIKMPLVPEVLI 292
W + + GS + ++ ELS R + S LQS+ + S R SP+ P P
Sbjct: 221 KPWPDATYGTGSASRASAVSELSPRERSPALKSPLQSVVVRRRSPRPSPVPKPSPPLSST 280
Query: 293 TAAEAPVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPMGS-ILSPSEKETPPGGPSP 351
+ + +P+ GY S T Q Q GS LSPS K++P G P
Sbjct: 281 SQMGSTLPSGAGYQ-----------------SGTHQGQFDHGSGSLSPS-KKSPVGKSPP 322
Query: 352 QTVSASAEENIFNCEEDPGDTFLKRW 377
T S G + KR+
Sbjct: 323 STGSTYGSSQKEESAASGGAAYTKRY 348
>gi|157311635 FAM83H [Homo sapiens]
Length = 1179
Score = 33.5 bits (75), Expect = 0.41
Identities = 64/189 (33%), Positives = 79/189 (41%), Gaps = 43/189 (22%)
Query: 180 RRVKRFLSAHEHPSSPRRRSYRRQTSDSSMFLPRDDLSPARDLLDVPSRNPPRASPTWKK 239
R RFLSA H +SP Q DS + L + S A +L N + SPT
Sbjct: 830 RLPSRFLSAQSHSTSP-------QGLDSPLPL---EGSGAHQVL----HNESKGSPT--- 872
Query: 240 SCFPE--GSPTLHFSMGELS-TIRETSQTSTLQSLTPQSSVRTSPIKMPLVPEVLITAAE 296
S +PE GSPT FS S T Q + S P+ R SP+ P VPE ++
Sbjct: 873 SAYPERKGSPTPGFSTRRGSPTTGFIEQKGSPTSAYPER--RGSPV--PPVPE-RRSSPV 927
Query: 297 APVPTSGGYHHDSATSILSSEFTGVQPSKTEQQQGPM-----GS-----ILSPS---EKE 343
PVP G S T +S E P++ E GPM GS +LSP E
Sbjct: 928 PPVPERRG----SLTLTISGESPKAGPAE-EGPSGPMEVLRKGSLRLRQLLSPKGERRME 982
Query: 344 TPPGGPSPQ 352
G P PQ
Sbjct: 983 DEGGFPVPQ 991
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,854,698
Number of Sequences: 37866
Number of extensions: 1033511
Number of successful extensions: 3427
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 125
Number of HSP's that attempted gapping in prelim test: 3227
Number of HSP's gapped (non-prelim): 332
length of query: 455
length of database: 18,247,518
effective HSP length: 106
effective length of query: 349
effective length of database: 14,233,722
effective search space: 4967568978
effective search space used: 4967568978
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.