BEST2 2353

Name: BEST2	Sequence: fasta or formatted (509aa)		NCBI GI: 119703742
Description: vitelliform macular dystrophy 2-like 1		Referenced in: Chloride Channels
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 44 2 C cysteine 2.6 13 1 D aspartate 5.5 28 4 E glutamate 5.7 29 4 F phenylalanine 6.3 32 3 G glycine 7.3 37 2 H histidine 0.8 4 1 I isoleucine 3.1 16 1 K lysine 2.8 14 2 L leucine 12.8 65 4 M methionine 2.6 13 1 N asparagine 2.6 13 1 P proline 7.1 36 3 Q glutamine 3.3 17 1 R arginine 6.3 32 2 S serine 5.3 27 2 T threonine 4.1 21 1 V valine 7.1 36 2 W tryptophan 2.0 10 2 Y tyrosine 4.3 22 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vitelliform macular dystrophy 2-like 1 BEST4 0.481 bestrophin 4 BEST3 0.473 vitelliform macular dystrophy 2-like 3 isoform 1 [H... BEST1 0.464 bestrophin 1 isoform 1 BEST1 0.398 bestrophin 1 isoform 2 BEST3 0.144 vitelliform macular dystrophy 2-like 3 isoform 2 [H... FMNL1 0.019 formin-like 1 HES4 0.015 hairy and enhancer of split 4 isoform 1 HES4 0.015 hairy and enhancer of split 4 isoform 2 PLSCR3 0.015 phospholipid scramblase 3 SETD1B 0.015 SET domain containing 1B FMN1 0.014 formin 1 COL10A1 0.014 type X collagen alpha 1 precursor SNRPB 0.014 small nuclear ribonucleoprotein polypeptide B/B' iso... RBM42 0.014 RNA binding motif protein 42 RBM26 0.014 RNA binding motif protein 26 PRPF40B 0.014 Huntingtin interacting protein C isoform 2 PRPF40B 0.014 Huntingtin interacting protein C isoform 1 FLJ22184 0.014 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.014 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.014 PREDICTED: hypothetical protein LOC80164 COL4A5 0.014 type IV collagen alpha 5 isoform 2 precursor ZNF414 0.014 zinc finger protein 414 isoform 1 ZNF414 0.014 zinc finger protein 414 isoform 2 COL4A5 0.014 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.014 type IV collagen alpha 5 isoform 3 precursor DAAM1 0.014 dishevelled-associated activator of morphogenesis 1 ... MAPK1IP1L 0.013 MAPK-interacting and spindle-stabilizing protein [Ho... MNT 0.013 MAX binding protein SNRPN 0.013 small nuclear ribonucleoprotein polypeptide N Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.