BEST3 1595

Name: BEST3	Sequence: fasta or formatted (455aa)		NCBI GI: 115527106
Description: vitelliform macular dystrophy 2-like 3 isoform 2		Referenced in: Chloride Channels
Other entries for this name: alt prot [668aa] vitelliform macular dystrophy 2-like 3 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.4 20 3 C cysteine 1.1 5 1 D aspartate 6.6 30 4 E glutamate 7.0 32 2 F phenylalanine 3.5 16 1 G glycine 5.3 24 2 H histidine 2.6 12 2 I isoleucine 4.4 20 2 K lysine 4.0 18 2 L leucine 9.2 42 2 M methionine 3.3 15 1 N asparagine 3.1 14 1 P proline 8.4 38 2 Q glutamine 3.3 15 3 R arginine 5.5 25 3 S serine 13.0 59 2 T threonine 6.8 31 2 V valine 4.0 18 1 W tryptophan 2.2 10 1 Y tyrosine 2.4 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vitelliform macular dystrophy 2-like 3 isoform 2 [H... BEST3 0.974 vitelliform macular dystrophy 2-like 3 isoform 1 [H... BEST1 0.175 bestrophin 1 isoform 2 BEST1 0.175 bestrophin 1 isoform 1 BEST2 0.162 vitelliform macular dystrophy 2-like 1 BEST4 0.095 bestrophin 4 PDLIM2 0.020 PDZ and LIM domain 2 isoform 3 PDLIM2 0.020 PDZ and LIM domain 2 isoform 1 PDLIM2 0.020 PDZ and LIM domain 2 isoform 2 MUC4 0.019 mucin 4 isoform a MUC12 0.014 PREDICTED: mucin 12 LOC100133714 0.014 PREDICTED: similar to Mucin-12, partial MUC12 0.014 PREDICTED: mucin 12 MAP1A 0.014 microtubule-associated protein 1A MUC5AC 0.013 mucin 5AC MUC5B 0.013 mucin 5, subtype B, tracheobronchial KANK4 0.012 ankyrin repeat domain 38 LOC100290483 0.012 PREDICTED: hypothetical protein XP_002347000 SON 0.012 SON DNA-binding protein isoform F SON 0.012 SON DNA-binding protein isoform B MDC1 0.010 mediator of DNA-damage checkpoint 1 MUC12 0.010 PREDICTED: mucin 12, cell surface associated CREBBP 0.010 CREB binding protein isoform b CREBBP 0.010 CREB binding protein isoform a FAM189A1 0.010 hypothetical protein LOC23359 MUC2 0.010 mucin 2 precursor LOC100133756 0.010 PREDICTED: hypothetical protein, partial PDZD2 0.010 PDZ domain containing 2 THRAP3 0.010 thyroid hormone receptor associated protein 3 [Homo... FAM83H 0.009 FAM83H Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.