BEST3 1594

Name: BEST3	Sequence: fasta or formatted (668aa)		NCBI GI: 115527104
Description: vitelliform macular dystrophy 2-like 3 isoform 1		Referenced in: Chloride Channels
Other entries for this name: alt prot [455aa] vitelliform macular dystrophy 2-like 3 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.6 31 3 C cysteine 1.0 7 1 D aspartate 5.5 37 4 E glutamate 5.5 37 2 F phenylalanine 5.5 37 3 G glycine 5.2 35 2 H histidine 2.5 17 2 I isoleucine 4.5 30 2 K lysine 3.9 26 2 L leucine 10.8 72 3 M methionine 2.8 19 1 N asparagine 2.8 19 1 P proline 6.6 44 2 Q glutamine 3.0 20 3 R arginine 6.0 40 3 S serine 10.6 71 3 T threonine 6.9 46 2 V valine 5.8 39 2 W tryptophan 2.2 15 2 Y tyrosine 3.9 26 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 vitelliform macular dystrophy 2-like 3 isoform 1 [H... BEST3 0.660 vitelliform macular dystrophy 2-like 3 isoform 2 [H... BEST1 0.363 bestrophin 1 isoform 1 BEST2 0.360 vitelliform macular dystrophy 2-like 1 BEST4 0.340 bestrophin 4 BEST1 0.314 bestrophin 1 isoform 2 PDLIM2 0.013 PDZ and LIM domain 2 isoform 3 PDLIM2 0.013 PDZ and LIM domain 2 isoform 1 PDLIM2 0.013 PDZ and LIM domain 2 isoform 2 MUC4 0.013 mucin 4 isoform a MUC12 0.010 PREDICTED: mucin 12 LOC100133714 0.010 PREDICTED: similar to Mucin-12, partial MUC12 0.010 PREDICTED: mucin 12 MAP1A 0.010 microtubule-associated protein 1A MUC5AC 0.009 mucin 5AC MUC5B 0.009 mucin 5, subtype B, tracheobronchial KANK4 0.008 ankyrin repeat domain 38 LOC100290483 0.008 PREDICTED: hypothetical protein XP_002347000 SON 0.008 SON DNA-binding protein isoform F SON 0.008 SON DNA-binding protein isoform B MDC1 0.007 mediator of DNA-damage checkpoint 1 MUC12 0.007 PREDICTED: mucin 12, cell surface associated CREBBP 0.007 CREB binding protein isoform b CREBBP 0.007 CREB binding protein isoform a FAM189A1 0.007 hypothetical protein LOC23359 MUC2 0.007 mucin 2 precursor LOC100133756 0.007 PREDICTED: hypothetical protein, partial PDZD2 0.007 PDZ domain containing 2 SRRM2 0.007 splicing coactivator subunit SRm300 THRAP3 0.007 thyroid hormone receptor associated protein 3 [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.