BEST1 30864

Name: BEST1	Sequence: fasta or formatted (585aa)		NCBI GI: 4759310
Description: bestrophin 1 isoform 1		Referenced in: Chloride Channels
Other entries for this name: alt prot [604aa] bestrophin 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 35 2 C cysteine 0.9 5 1 D aspartate 4.4 26 4 E glutamate 6.5 38 2 F phenylalanine 5.5 32 3 G glycine 4.4 26 2 H histidine 3.1 18 2 I isoleucine 3.9 23 2 K lysine 5.0 29 2 L leucine 12.5 73 3 M methionine 2.7 16 1 N asparagine 4.3 25 1 P proline 6.7 39 2 Q glutamine 4.8 28 2 R arginine 5.1 30 2 S serine 6.7 39 2 T threonine 5.1 30 2 V valine 5.8 34 2 W tryptophan 2.6 15 2 Y tyrosine 4.1 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 bestrophin 1 isoform 1 BEST1 0.892 bestrophin 1 isoform 2 BEST3 0.412 vitelliform macular dystrophy 2-like 3 isoform 1 [H... BEST2 0.401 vitelliform macular dystrophy 2-like 1 BEST4 0.367 bestrophin 4 BEST3 0.135 vitelliform macular dystrophy 2-like 3 isoform 2 [H... CYTSA 0.009 cytospin A CYTSA 0.009 cytospin A ATE1 0.009 arginyltransferase 1 isoform 1 CXorf66 0.008 hypothetical protein LOC347487 USP10 0.008 ubiquitin specific protease 10 SPEG 0.008 SPEG complex locus EIF4G1 0.006 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.006 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.006 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.006 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.006 eukaryotic translation initiation factor 4 gamma, 1 ... IQSEC2 0.005 IQ motif and Sec7 domain 2 isoform1 KCNH6 0.004 potassium voltage-gated channel, subfamily H, member... PCLO 0.004 piccolo isoform 2 PCLO 0.004 piccolo isoform 1 TFEB 0.004 transcription factor EB Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.