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Search of human proteins with 22325392
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22325392 tigger transposable element derived 7 [Homo
sapiens]
(549 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22325392 tigger transposable element derived 7 [Homo sapiens] 1112 0.0
gi|22547224 jerky homolog-like [Homo sapiens] 246 3e-65
gi|23312392 tigger transposable element derived 2 [Homo sapiens] 236 3e-62
gi|117938293 jerky isoform a [Homo sapiens] 199 7e-51
gi|117938295 jerky isoform b [Homo sapiens] 199 7e-51
gi|13569924 hypothetical protein LOC81789 [Homo sapiens] 190 3e-48
gi|22209001 hypothetical protein LOC200765 [Homo sapiens] 179 8e-45
gi|22219477 tigger transposable element derived 4 [Homo sapiens] 158 1e-38
gi|144922631 tigger transposable element derived 5 [Homo sapiens] 139 5e-33
gi|21735415 centromere protein B [Homo sapiens] 112 1e-24
gi|239750125 PREDICTED: hypothetical protein XP_002347296 [Homo ... 90 6e-18
gi|239744433 PREDICTED: hypothetical protein XP_002343159 [Homo ... 90 6e-18
gi|239755627 PREDICTED: similar to cag [Homo sapiens] 88 2e-17
gi|23312394 tigger transposable element derived 3 [Homo sapiens] 72 1e-12
gi|49619234 hypothetical protein LOC92806 [Homo sapiens] 45 2e-04
gi|207113199 erythrocyte membrane protein band 4.1-like 2 isofor... 36 0.080
gi|207113195 erythrocyte membrane protein band 4.1-like 2 isofor... 36 0.080
gi|4503579 erythrocyte membrane protein band 4.1-like 2 isoform ... 36 0.080
gi|22027480 pogo transposable element with KRAB domain [Homo sap... 35 0.23
gi|239756639 PREDICTED: similar to hCG1802057 [Homo sapiens] 33 0.52
gi|239751125 PREDICTED: hypothetical protein XP_002347719 [Homo ... 33 0.52
gi|239745616 PREDICTED: hypothetical protein XP_002344143 [Homo ... 33 0.52
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens] 33 0.52
gi|221219020 NYD-SP11 protein [Homo sapiens] 33 0.88
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof... 33 0.88
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof... 33 0.88
gi|151301127 dynein, axonemal, heavy chain 7 [Homo sapiens] 32 1.5
gi|188497705 BRCA1 associated protein [Homo sapiens] 30 4.4
gi|222537747 hypothetical protein LOC342979 [Homo sapiens] 30 5.7
gi|64085252 hypothetical protein LOC145508 [Homo sapiens] 30 5.7
>gi|22325392 tigger transposable element derived 7 [Homo sapiens]
Length = 549
Score = 1112 bits (2877), Expect = 0.0
Identities = 549/549 (100%), Positives = 549/549 (100%)
Query: 1 MNKRGKYTTLNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQD 60
MNKRGKYTTLNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQD
Sbjct: 1 MNKRGKYTTLNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQD 60
Query: 61 MPLVGAEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERFARCFGRTDFK 120
MPLVGAEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERFARCFGRTDFK
Sbjct: 61 MPLVGAEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERFARCFGRTDFK 120
Query: 121 ASTGWLFRFRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLSMIIKEEKLCLAQLYSGDET 180
ASTGWLFRFRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLSMIIKEEKLCLAQLYSGDET
Sbjct: 121 ASTGWLFRFRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLSMIIKEEKLCLAQLYSGDET 180
Query: 181 DLFWKSMPENSQASRKDICLPGKKINKERLSAFLCANADGTHKLKSIIIGKSKLPKSVKE 240
DLFWKSMPENSQASRKDICLPGKKINKERLSAFLCANADGTHKLKSIIIGKSKLPKSVKE
Sbjct: 181 DLFWKSMPENSQASRKDICLPGKKINKERLSAFLCANADGTHKLKSIIIGKSKLPKSVKE 240
Query: 241 DTSTLPVIYKPSKDVWFTRELFSEWFFQNFVPEVRHFQLNVLRFHDEDVRALLLLDSCPA 300
DTSTLPVIYKPSKDVWFTRELFSEWFFQNFVPEVRHFQLNVLRFHDEDVRALLLLDSCPA
Sbjct: 241 DTSTLPVIYKPSKDVWFTRELFSEWFFQNFVPEVRHFQLNVLRFHDEDVRALLLLDSCPA 300
Query: 301 HPSSESLTSEDGRIKCMFFPHNTSTLIQPMNQGVILSCKRLYRWKQLEESLVIFEESDDE 360
HPSSESLTSEDGRIKCMFFPHNTSTLIQPMNQGVILSCKRLYRWKQLEESLVIFEESDDE
Sbjct: 301 HPSSESLTSEDGRIKCMFFPHNTSTLIQPMNQGVILSCKRLYRWKQLEESLVIFEESDDE 360
Query: 361 QEKGDKGVSKIKIYNIKSAIFNWAKSWEEVKQITIANAWENLLYKKEPEYDFQGLEHGDY 420
QEKGDKGVSKIKIYNIKSAIFNWAKSWEEVKQITIANAWENLLYKKEPEYDFQGLEHGDY
Sbjct: 361 QEKGDKGVSKIKIYNIKSAIFNWAKSWEEVKQITIANAWENLLYKKEPEYDFQGLEHGDY 420
Query: 421 REILEKCGELETKLDDDRVWLNGDEEKGCLLKTKGGITKEVVQKGGEAEKQTAEFKLSAV 480
REILEKCGELETKLDDDRVWLNGDEEKGCLLKTKGGITKEVVQKGGEAEKQTAEFKLSAV
Sbjct: 421 REILEKCGELETKLDDDRVWLNGDEEKGCLLKTKGGITKEVVQKGGEAEKQTAEFKLSAV 480
Query: 481 RESLDYLLDFVDATPEFQRFHFTLKEMQQEIVKKQFQSKIHSRIGSFLKPRPHNIKDSFS 540
RESLDYLLDFVDATPEFQRFHFTLKEMQQEIVKKQFQSKIHSRIGSFLKPRPHNIKDSFS
Sbjct: 481 RESLDYLLDFVDATPEFQRFHFTLKEMQQEIVKKQFQSKIHSRIGSFLKPRPHNIKDSFS 540
Query: 541 GPSTSGSNH 549
GPSTSGSNH
Sbjct: 541 GPSTSGSNH 549
>gi|22547224 jerky homolog-like [Homo sapiens]
Length = 524
Score = 246 bits (629), Expect = 3e-65
Identities = 166/509 (32%), Positives = 258/509 (50%), Gaps = 33/509 (6%)
Query: 1 MNKRGKYTTLNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQD 60
M+ + K L +++K+ ++ ++E G S K + +GI ++T DI+KNK+ I+ + D
Sbjct: 1 MSGKRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSD 60
Query: 61 MPLVGAEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERFARCFGRT-DF 119
+ A KRK + Y ++D A+ W+ Q+R+ G P+ G AE F G DF
Sbjct: 61 STSLLA-KRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDF 119
Query: 120 KASTGWLFRFRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLSMIIKEEKLCLAQLYSGDE 179
S GWL RF+ RH+I E+ L+ VE F I+ E L Q+Y+ DE
Sbjct: 120 NPSAGWLTRFKQRHSIREINIRNER-LNGDETAVEDFCNNFRDFIERENLQPEQIYNADE 178
Query: 180 TDLFWKSMPENSQASRKDICLPGKKINKERLSAFLCANADGTHKLKSIIIGKSKLPKSVK 239
T LFWK +P + +PG K +ER++ CANA G HKLK ++GK+K P+S K
Sbjct: 179 TGLFWKCLPSRISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCVVGKAKKPRSFK 238
Query: 240 E-DTSTLPVIYKPSKDVWFTRELFSEWFFQNFVPEVRHFQLNVLRFHDEDVRALLLLDSC 298
DT LPV Y K W +F +WF + FVP+VR + LR +A+LLLD+
Sbjct: 239 STDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREY----LRSKGLQEKAVLLLDNS 294
Query: 299 PAHPSSESLTSEDGRIKCMFFPHNTSTLIQPMNQGVILSCKRLYRWKQLEESLVIFEESD 358
P HP+ L S+DG+I + P N ++LIQP +QGVI + KR YR L+ +L
Sbjct: 295 PTHPNENVLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNYRAGLLQNNL------- 347
Query: 359 DEQEKGDKGVSKIKIYNIKSAIFNWAKSWEEVKQITIANAWENLL----YKKEPEYDFQG 414
E+G+ S K + A++ A +W VK +TI+ AW+ +L K+ ++D +
Sbjct: 348 ---EEGNDLKSFWKKLTLLDALYEIAMAWNLVKPVTISRAWKKILPMVEEKESLDFDVED 404
Query: 415 LEHGDYREILEKCGELETKLDDD-RVWLNGDE-EKGCLLKTKGGITKEVVQKGGE-AEKQ 471
+ IL+ LE ++ WL D E G + T I + + E +E +
Sbjct: 405 ISVATVAAILQHTKGLENVTTENLEKWLEVDSTEPGYEVLTDSEIIRRAQGQADESSENE 464
Query: 472 TAEFKL--------SAVRESLDYLLDFVD 492
E +L +A + + LLD+++
Sbjct: 465 EEEIELIPEKHINHAAALQWTENLLDYLE 493
>gi|23312392 tigger transposable element derived 2 [Homo sapiens]
Length = 525
Score = 236 bits (603), Expect = 3e-62
Identities = 138/400 (34%), Positives = 214/400 (53%), Gaps = 20/400 (5%)
Query: 6 KYTTLNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQDMPLVG 65
K L +++K+ ++ ++E G S K + +GI +ST DIKKNK+ I+++ D P G
Sbjct: 6 KRVVLTIKDKLDIIKKLEEGISFKKLSVVYGIGESTVRDIKKNKERIINYANSSD-PTSG 64
Query: 66 AEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERFARCFGRT-DFKASTG 124
KRK + Y ++D + W+ Q+++ G+PV G A+ F G DF AS+G
Sbjct: 65 VSKRKSMKSSTYEELDRVMIEWFNQQKTDGIPVSGTICAKQAKFFFDALGMEGDFNASSG 124
Query: 125 WLFRFRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLSMIIKEEKLCLAQLYSGDETDLFW 184
WL RF+ RH I G G ++ + E F +++E L Q+Y D+T LFW
Sbjct: 125 WLTRFKQRHGIPKAAGKGTKLKGDETAARE-FCGSFQEFVEKENLQPEQIYGADQTGLFW 183
Query: 185 KSMPENSQASRKDICLPGKKINKERLSAFLCANADGTHKLKSIIIGKSKLPKSVK-EDTS 243
K +P + D G + ++ER+ CANA G HKL ++GK+K P++ K D S
Sbjct: 184 KCLPSRTLTLETDQSTSGCRSSRERIIIMCCANATGLHKLNLCVVGKAKKPRAFKGTDLS 243
Query: 244 TLPVIYKPSKDVWFTRELFSEWFFQNFVPEV-RHFQLNVLRFHDEDVRALLLLDSCPAHP 302
LPV Y K W + +F +WF + FVP+V +H + L +A+LLLD PA P
Sbjct: 244 NLPVTYYSQKGAWIEQSVFRQWFEKYFVPQVQKHLKSKGLL-----EKAVLLLDFPPARP 298
Query: 303 SSESLTSEDGRIKCMFFPHNTSTLIQPMNQGVILSCKRLYRWKQLEESLVIFEESDDEQE 362
+ E L+S+DGRI + P N ++LIQPM+QGV+ + KR YR L++ + +
Sbjct: 299 NEEMLSSDDGRIIVKYLPPNVTSLIQPMSQGVLATVKRYYRAGLLQKYM----------D 348
Query: 363 KGDKGVSKIKIYNIKSAIFNWAKSWEEVKQITIANAWENL 402
+G+ K + AI+ +++W VK TI AW+ L
Sbjct: 349 EGNDPKIFWKNLTVLDAIYEVSRAWNMVKSSTITKAWKKL 388
>gi|117938293 jerky isoform a [Homo sapiens]
Length = 568
Score = 199 bits (505), Expect = 7e-51
Identities = 135/402 (33%), Positives = 200/402 (49%), Gaps = 31/402 (7%)
Query: 3 KRGKYTTLNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQDMP 62
++ K L L+EK+ + +R+E G S K++M E+ + ST YDI+ +K +L F D
Sbjct: 13 EKRKRVVLTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFASSDSN 72
Query: 63 LVGAEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERFARCFGRTD-FKA 121
E+R+ K +D +Y W+ KRS GVPV G L A+ F T+
Sbjct: 73 -KALEQRRTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQLTEPCVF 131
Query: 122 STGWLFRFRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLSMIIKEEKLCLAQLYSGDETD 181
S GWL+RF+ RH I E+ S+ + E F + E L Q+Y+ DET
Sbjct: 132 SGGWLWRFKARHGIKKLDASSEK-QSADHQAAEQFCAFFRSLAAEHGLSAEQVYNADETG 190
Query: 182 LFWKSMPENSQASRKDICLPGKKINKERLSAFLCANADGTHKLKSIIIGKSKLPKSVKED 241
LFW+ +P + +PG K K+RL+ +CANA G+H+LK + IGK P++ K
Sbjct: 191 LFWRCLPNPTPEGG---AVPGPKQGKDRLTVLMCANATGSHRLKPLAIGKCSGPRAFK-G 246
Query: 242 TSTLPVIYKPSKDVWFTRELFSEWFFQNFVPEVR-HFQLNVLRFHDEDVRALLLLDSCPA 300
LPV YK + W +E+FS+WF FVP VR HF+ L ED +A+LLLDS A
Sbjct: 247 IQHLPVAYKAQGNAWVDKEIFSDWFHHIFVPSVREHFRTIGL---PEDSKAVLLLDSSRA 303
Query: 301 HPSSESLTSEDGRIKCMFFPHNTSTLIQPMNQGVILSCKRLYRWKQLEESLVIFEESDDE 360
HP L S + + +F P + ++L+QPM QG+ +R + + + +
Sbjct: 304 HPQEAELVSSN--VFTIFLPASVASLVQPMEQGI----RRDFMRNFINPPVPL------- 350
Query: 361 QEKGDKGVSKIKIYNIKSAIFNWAKSWEEVKQITIANAWENL 402
+G YN+ AIF+ A +W V AW L
Sbjct: 351 --QGPHA-----RYNMNDAIFSVACAWNAVPSHVFRRAWRKL 385
>gi|117938295 jerky isoform b [Homo sapiens]
Length = 556
Score = 199 bits (505), Expect = 7e-51
Identities = 135/402 (33%), Positives = 200/402 (49%), Gaps = 31/402 (7%)
Query: 3 KRGKYTTLNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQDMP 62
++ K L L+EK+ + +R+E G S K++M E+ + ST YDI+ +K +L F D
Sbjct: 13 EKRKRVVLTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFASSDSN 72
Query: 63 LVGAEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERFARCFGRTD-FKA 121
E+R+ K +D +Y W+ KRS GVPV G L A+ F T+
Sbjct: 73 -KALEQRRTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQLTEPCVF 131
Query: 122 STGWLFRFRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLSMIIKEEKLCLAQLYSGDETD 181
S GWL+RF+ RH I E+ S+ + E F + E L Q+Y+ DET
Sbjct: 132 SGGWLWRFKARHGIKKLDASSEK-QSADHQAAEQFCAFFRSLAAEHGLSAEQVYNADETG 190
Query: 182 LFWKSMPENSQASRKDICLPGKKINKERLSAFLCANADGTHKLKSIIIGKSKLPKSVKED 241
LFW+ +P + +PG K K+RL+ +CANA G+H+LK + IGK P++ K
Sbjct: 191 LFWRCLPNPTPEGG---AVPGPKQGKDRLTVLMCANATGSHRLKPLAIGKCSGPRAFK-G 246
Query: 242 TSTLPVIYKPSKDVWFTRELFSEWFFQNFVPEVR-HFQLNVLRFHDEDVRALLLLDSCPA 300
LPV YK + W +E+FS+WF FVP VR HF+ L ED +A+LLLDS A
Sbjct: 247 IQHLPVAYKAQGNAWVDKEIFSDWFHHIFVPSVREHFRTIGL---PEDSKAVLLLDSSRA 303
Query: 301 HPSSESLTSEDGRIKCMFFPHNTSTLIQPMNQGVILSCKRLYRWKQLEESLVIFEESDDE 360
HP L S + + +F P + ++L+QPM QG+ +R + + + +
Sbjct: 304 HPQEAELVSSN--VFTIFLPASVASLVQPMEQGI----RRDFMRNFINPPVPL------- 350
Query: 361 QEKGDKGVSKIKIYNIKSAIFNWAKSWEEVKQITIANAWENL 402
+G YN+ AIF+ A +W V AW L
Sbjct: 351 --QGPHA-----RYNMNDAIFSVACAWNAVPSHVFRRAWRKL 385
>gi|13569924 hypothetical protein LOC81789 [Homo sapiens]
Length = 521
Score = 190 bits (482), Expect = 3e-48
Identities = 123/398 (30%), Positives = 204/398 (51%), Gaps = 35/398 (8%)
Query: 6 KYTTLNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQDMPLVG 65
K +LEEKMKV+ +++G+ V EFGI+ ST K++ + V + +
Sbjct: 8 KRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVREASV---- 63
Query: 66 AEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERFARCFGRTDFKASTGW 125
+RKR A Y D+D AV+ W+Q+ + + V G ++ A A G +F+AS GW
Sbjct: 64 GPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQASVGW 123
Query: 126 LFRFRNRHAIGNRKGCGE---QVLSSVSENVEPFRQKLSMIIKEEKLCLAQLYSGDETDL 182
L RFR+RH I + C E ++++ + + +I +++ DET +
Sbjct: 124 LNRFRDRHGIALKAVCREDSDRLMNGLGIDKINEWHAGEIIKLIADYSPDDIFNADETGV 183
Query: 183 FWKSMPENSQASRKDICLPGKKINKERLSAFLCANADGTHKLKSIIIGKSKLPKSVKEDT 242
F++ +P+++ A++ D C GKK K+RL+A C NA GT K++ +I+G+S P +K +
Sbjct: 184 FFQLLPQHTLAAKGDHCRGGKKA-KQRLTALFCCNASGTEKMRPLIVGRSASPHCLK-NI 241
Query: 243 STLPVIYKPSKDVWFTRELFSEWFFQNFVPEVRHFQLNVLRFHDEDVRALLLLDSCPAHP 302
+LP Y+ ++ W TR+LF+EW Q R + R LLL+D+C AH
Sbjct: 242 HSLPCDYRANQWAWMTRDLFNEWLMQVDA-----------RMKRAERRILLLIDNCSAHN 290
Query: 303 SSESLTSEDGRIKCMFFPHNTSTLIQPMNQGVILSCKRLYRWKQLEESLVIFEESDDEQE 362
L RI+ + P N + ++QP+N G+I + K LY+ L++ L+ S+D++E
Sbjct: 291 MLPHLE----RIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSSEDQEE 346
Query: 363 KGDKGVSKIKIYNIKSAIFNWAKSWEEVKQITIANAWE 400
+IK AI A +W VK T+ W+
Sbjct: 347 -----------VDIKQAIDMIAAAWWSVKPSTVVKCWQ 373
>gi|22209001 hypothetical protein LOC200765 [Homo sapiens]
Length = 591
Score = 179 bits (453), Expect = 8e-45
Identities = 135/453 (29%), Positives = 218/453 (48%), Gaps = 30/453 (6%)
Query: 2 NKRGKYTTLNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQDM 61
++R T+L L +K++++ E G S + G+ + T + K+ L V K
Sbjct: 7 SERKSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEV-KSAT 65
Query: 62 PLVGAEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQ---------AAAERFAR 112
P+ RKR + D++ + +W + + S +P+ +Q AER
Sbjct: 66 PMNTRMIRKRNS--LIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGVE 123
Query: 113 CFGRTDFKASTGWLFRFRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLSMIIKEEKLCLA 172
F+AS GW RF+ R N K GE + V E + + L+ II E
Sbjct: 124 A-AEEKFEASRGWFMRFKERSHFHNIKAQGEAASADV-EAAASYPEALAKIIDEGGYTKQ 181
Query: 173 QLYSGDETDLFWKSMPENSQASRKDICLPGKKINKERLSAFLCANADGTHKLKSIIIGKS 232
Q+++ DET +WK MP + +R++ +PG K +K+RL+ L ANA G KLK ++I S
Sbjct: 182 QIFNVDETAFYWKKMPSRTFIAREEKSVPGFKASKDRLTLLLGANAAGDFKLKPMLIYHS 241
Query: 233 KLPKSVKEDT-STLPVIYKPSKDVWFTRELFSEWFFQNFVPEVRHFQLNVLRFHDEDVRA 291
+ P+++K T STLPV+YK + T LF+ WF + F P V + +
Sbjct: 242 ENPRALKNYTKSTLPVLYKWNSKARMTAHLFTAWFTEYFKPTVETY----CSEKKIPFKI 297
Query: 292 LLLLDSCPAHPSSESLTSEDGRIKCMFFPHNTSTLIQPMNQGVILSCKRLYRWKQLEESL 351
LLL+D+ P+HP + E+ I +F P NT++++QPM+QGVI + K Y ++L
Sbjct: 298 LLLIDNAPSHPRALMEIYEE--INVIFMPANTTSILQPMDQGVISTFKSYYLRNTFHKAL 355
Query: 352 VIFEESDDEQEKGDKGVSKIKI----YNIKSAIFNWAKSWEEVKQITIANAWENLLYKKE 407
D G SK+K + I AI N SWEEVK T+ W+ L+
Sbjct: 356 AAM----DSDVSDGSGQSKLKTFWKGFTILDAIKNIRDSWEEVKLSTLTGVWKKLIPTLI 411
Query: 408 PEYD-FQGLEHGDYREILEKCGELETKLDDDRV 439
+Y+ F+ +++E ELE +++ + V
Sbjct: 412 DDYEGFKTSVEEVSADVVEIAKELELEVEPEDV 444
>gi|22219477 tigger transposable element derived 4 [Homo sapiens]
Length = 512
Score = 158 bits (399), Expect = 1e-38
Identities = 116/402 (28%), Positives = 195/402 (48%), Gaps = 35/402 (8%)
Query: 6 KYTTLNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQDMPLVG 65
K +L++EEK+ +++ +E+G+ + E+GI K++ I KNK D VL+ L
Sbjct: 17 KKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNK----DKVLEAFESLRF 72
Query: 66 AEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERFARCFGRTDFKASTGW 125
KRKR A Y D+++A+ WY+ + VPV G L+ A FA+ G DFK S GW
Sbjct: 73 DPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGW 132
Query: 126 LFRFRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLSMIIKEEKLCLAQLYSGDETDLFWK 185
L RF++R+ + R E V + ++ L + + +++ ET L ++
Sbjct: 133 LDRFKSRYGLVFRAQPVEATGVPVDPSTVWYQNVLPYYLNDYH--PKNVFNIKETGLLYR 190
Query: 186 SMPENSQASRKDICLPGKKINKERLSAFLCANADGTHKLKSIIIGKSKLPKSVKEDTSTL 245
+P N+ A + + C G K+ K+R++ + N DG+ KL ++IGK + P K +L
Sbjct: 191 MLPTNTFAFKGETCSVG-KLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPHCFK-GLKSL 248
Query: 246 PVIYKPSKDVWFTRELFSEWFFQNFVPEVRHFQLNVLRFHDEDVRALLLLDSCPAHPSSE 305
PV Y+ ++ W T ++F +W + + E F + R ++ ++S PAHP +
Sbjct: 249 PVCYEANRMAWMTSDVFEQWMRK--LDE---------EFQAQQRRVVIFVESFPAHPEVK 297
Query: 306 SLTSEDGRIKCMFFPHNTSTLIQPMNQGVILSCKRLYRWKQLEESLVIFEESDDEQEKGD 365
+L S I+ FFP S+ M QGVI S K YR +++ L E
Sbjct: 298 NLKS----IELAFFPSCLSSKCIAMKQGVIKSLKIKYRHCLIKKFLSSVEG--------- 344
Query: 366 KGVSKIKIYNIKSAIFNWAKSWEEVKQITIANAWENLLYKKE 407
SK +++ A+ W V TI ++E +K +
Sbjct: 345 ---SKEFTFSLLDAVDTLHLCWRAVTPETIVKSYEEAGFKSQ 383
>gi|144922631 tigger transposable element derived 5 [Homo sapiens]
Length = 593
Score = 139 bits (351), Expect = 5e-33
Identities = 120/445 (26%), Positives = 203/445 (45%), Gaps = 80/445 (17%)
Query: 11 NLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQDMPLVGAEKRK 70
++++K++ + R++ G SV +FG+ T K++ + F L+Q VG +++K
Sbjct: 8 SIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWF-LEQLGGEVGTQRKK 66
Query: 71 RTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERFAR-CFG-RTDFKASTGWLFR 128
A ++D AVY W+ R GVP+ G +QA AE FAR +G FKAS GW +R
Sbjct: 67 MRL-ANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWFWR 125
Query: 129 FRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLSMIIKEEKLCLA---------------- 172
++ RH I +++ GE + S P +KEE +
Sbjct: 126 WQKRHGISSQRFYGEAGPPAPSPAPGP-------PVKEEPALPSGAGPLPDRAPAPPPPA 178
Query: 173 -------QLYSGDETDLFWKSMPENSQASRKDICLPG-----KKINKERLSAFLCANADG 220
Q+YS T L+WK +PE QA+ PG ++ +R++ L AN G
Sbjct: 179 EGGYGDEQIYSASVTGLYWKLLPE--QAAPPGAGDPGAGGCGRRWRGDRVTVLLAANLTG 236
Query: 221 THKLKSIIIGKSKLPKSVKE-DTSTLPVIYKPSKDVWFTRELFSEWFFQNFVPEVRHFQL 279
+HKLK ++IG+ P S++ + P Y+ S D W +R L WFF+ FVP V+ +
Sbjct: 237 SHKLKPLVIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKRY-- 294
Query: 280 NVLRFHDEDVRALLLL--DSCPAHPSS---------------------ESLTSEDGRIKC 316
LR +A+LL+ CP+ +S E L + DG ++
Sbjct: 295 --LRRSCLQQKAVLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEELQTPDGAVRV 352
Query: 317 MFFPHNTST--LIQPMNQGVILSCKRLYRWKQLEESLVIFEESDDEQEKGDKGVSKIKIY 374
+F +S + P+ QGV+ + K+LY+ + L ++ S + ++ +
Sbjct: 353 LFLSKGSSRAHIPAPLEQGVVAAFKQLYKRELLRLAVSCASGSP---------LDFMRSF 403
Query: 375 NIKSAIFNWAKSWEEVKQITIANAW 399
+K ++ SW+ V+ +I W
Sbjct: 404 MLKDMLYLAGLSWDLVQAGSIERCW 428
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 112 bits (279), Expect = 1e-24
Identities = 129/527 (24%), Positives = 212/527 (40%), Gaps = 78/527 (14%)
Query: 6 KYTTLNLEEKMKVLSRIEAGRSLKS--VMDEFGISKSTFYDIKKNKKLILDFVLKQDMPL 63
K L EK +++ +E L+ + F I ST I KNK+ IL K
Sbjct: 4 KRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYG--- 60
Query: 64 VGAEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERFARCFGRTDFKAST 123
V + RK + Y ++ + W+QQ R+AG+PV+G+ L+ A R A G DF AS
Sbjct: 61 VASTCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASN 120
Query: 124 GWLFRFRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLSMIIKE----------------- 166
GWL RFR RH + + G + + + + E
Sbjct: 121 GWLDRFRRRHGVVSCSGVARARARNAAPRTPAAPASPAAVPSEGSGGSTTGWRAREEQPP 180
Query: 167 ---EKLCLAQLYSGDETDLFWKSMPENSQASRKDICLPGKKINKERLSAFLCANADGTHK 223
E ++S ET L++ +P+ + P + +RLS LCANADG+ K
Sbjct: 181 SVAEGYASQDVFSATETSLWYDFLPDQAAGLCGGDGRPRQA--TQRLSVLLCANADGSEK 238
Query: 224 LKSIIIGKSKLPKSVKEDTSTLPVIYKPSKDVWFTRELFSEWFFQNFVPEVRHFQLNVLR 283
L ++ GKS P++ + LP Y + T + + ++ + R
Sbjct: 239 LPPLVAGKSAKPRA---GQAGLPCDYTANSKGGVTTQALA-----------KYLKALDTR 284
Query: 284 FHDEDVRALLLLDSCPAHPSSESLTSEDGRIKCMFFPHNTSTLIQPMNQGVILSCKRLYR 343
E R LLL A TS ++ FFP T + P+ +GV+ K YR
Sbjct: 285 MAAESRRVLLLAGRLAAQSLD---TSGLRHVQLAFFPPGT---VHPLERGVVQQVKGHYR 338
Query: 344 WKQLEESLVIFEESDDEQEKGDKGVSKIKIYNIKSAIFNWAKSWEEVKQITIANAWENLL 403
L +++ E D S +++ + A+ A +W+ V+ IA +
Sbjct: 339 QAMLLKAMAALEGQDP---------SGLQL-GLTEALHFVAAAWQAVEPSDIAACFR--- 385
Query: 404 YKKEPEYDFQGLEHGDYREILEKCGELETKLDDDRVWLNG----DEEKGCLLKTKGGITK 459
E F G + L+ GE E + +++ G +EE+G + +GG +
Sbjct: 386 -----EAGFGGGPNATITTSLKSEGEEEEEEEEEEEEEEGEGEEEEEEGEEEEEEGGEGE 440
Query: 460 EV-----VQKGGEA----EKQTAEFKLSAVRESLDYLLDFVDATPEF 497
E+ V++ G+ E++ E S E+ D+ V+A F
Sbjct: 441 ELGEEEEVEEEGDVDSDEEEEEDEESSSEGLEAEDWAQGVVEAGGSF 487
>gi|239750125 PREDICTED: hypothetical protein XP_002347296 [Homo
sapiens]
Length = 392
Score = 89.7 bits (221), Expect = 6e-18
Identities = 52/162 (32%), Positives = 92/162 (56%), Gaps = 7/162 (4%)
Query: 3 KRGKYTTLNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQDMP 62
K+ K+ L++ +K+K+L ++++G S+K + +E+G+ +T YD+KK K +L F + D
Sbjct: 59 KKRKHLCLSIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKFYAESDEQ 118
Query: 63 LVGAEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERF---ARCFGRTDF 119
++ + RK AK D+D + W +Q+RS +P+ G+ + A+ + + G ++
Sbjct: 119 IL-MKNRKTLHKAKNEDLDRVLKEWIRQRRSEHMPLNGMLIMKQAKIYHNELKIEGNCEY 177
Query: 120 KASTGWLFRFRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLS 161
STGWL +F+ RH I K CG + S+ E E F K S
Sbjct: 178 --STGWLQKFKKRHGIKFLKTCGNKA-SAGHEATEKFTGKFS 216
>gi|239744433 PREDICTED: hypothetical protein XP_002343159 [Homo
sapiens]
Length = 392
Score = 89.7 bits (221), Expect = 6e-18
Identities = 52/162 (32%), Positives = 92/162 (56%), Gaps = 7/162 (4%)
Query: 3 KRGKYTTLNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQDMP 62
K+ K+ L++ +K+K+L ++++G S+K + +E+G+ +T YD+KK K +L F + D
Sbjct: 59 KKRKHLCLSIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKFYAESDEQ 118
Query: 63 LVGAEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERF---ARCFGRTDF 119
++ + RK AK D+D + W +Q+RS +P+ G+ + A+ + + G ++
Sbjct: 119 IL-MKNRKTLHKAKNEDLDRVLKEWIRQRRSEHMPLNGMLIMKQAKIYHNELKIEGNCEY 177
Query: 120 KASTGWLFRFRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLS 161
STGWL +F+ RH I K CG + S+ E E F K S
Sbjct: 178 --STGWLQKFKKRHGIKFLKTCGNKA-SAGHEATEKFTGKFS 216
>gi|239755627 PREDICTED: similar to cag [Homo sapiens]
Length = 392
Score = 87.8 bits (216), Expect = 2e-17
Identities = 51/162 (31%), Positives = 91/162 (56%), Gaps = 7/162 (4%)
Query: 3 KRGKYTTLNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQDMP 62
K+ K+ L++ +K+K+L ++++G S+K + +E+G+ +T YD+KK K +L F + D
Sbjct: 59 KKRKHLCLSIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKFYAESDEQ 118
Query: 63 LVGAEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERF---ARCFGRTDF 119
++ + RK AK D+D + W +Q+RS +P+ G+ + A+ + + G ++
Sbjct: 119 IL-MKNRKTLHKAKNEDLDRVLKEWIRQRRSEHMPLNGMLIMKQAKIYHNELKIEGNCEY 177
Query: 120 KASTGWLFRFRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLS 161
STGWL +F+ RH I K CG + S+ E E F S
Sbjct: 178 --STGWLQKFKKRHGIKFLKTCGNKA-SAGHEATEKFTGNFS 216
>gi|23312394 tigger transposable element derived 3 [Homo sapiens]
Length = 471
Score = 72.4 bits (176), Expect = 1e-12
Identities = 97/394 (24%), Positives = 158/394 (40%), Gaps = 55/394 (13%)
Query: 1 MNKRGKYTTLNLEEKMKVLSRIEAGRSLKS-VMDEFGISKSTFYDIKKNK-KLILDFVLK 58
++ + K L+L EK++VL ++ + +S V F +S+ I KNK KL+ D+
Sbjct: 3 LSSKKKLHALSLAEKIQVLELLDESKMSQSEVARRFQVSQPQISRICKNKEKLLADWCSG 62
Query: 59 QDMPLVGAEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERFARCFGRTD 118
+RKR +KY +D+A+ WY R+ V G L A+ A G+ D
Sbjct: 63 -----TANRERKRKRESKYSGIDEALLCWYHIARAKAWDVTGPMLLHKAKELADIMGQ-D 116
Query: 119 FKASTGWLFRFRNRHAIGNRKGCGEQVLSSVSENVEP----FRQKLSMIIKEEKLCLAQL 174
F S GWL R++ R N G G + + + S EP + + + + +
Sbjct: 117 FVPSIGWLVRWKRR----NNVGFGARHVLAPSFPPEPPPPGLTSQAQLPLSLKDFSPEDV 172
Query: 175 YSGDETDLFWKSMPENSQASRKDICLPGKKINKERLSAFLCANADGTHKLKSIIIGKSKL 234
+ E L ++++P + A +++ LCAN+ GT K + ++ G
Sbjct: 173 FGCAELPLLYRAVPGSFGAC-------------DQVQVLLCANSRGTEKRRVLLGGLQAA 219
Query: 235 PKSVKEDTS-TLPVIYKPSKDV-WFTRELFSEWFFQNFVPEVRHFQLNVLRFHDEDVRAL 292
P+ S LP Y P + W EW Q F ++ V AL
Sbjct: 220 PRCFFGIRSEALPASYHPDLGIPWL------EWLAQ-FDRDMGQQGRQV---------AL 263
Query: 293 LLLDSCPAHPSSESLTSEDGRIKCMFFPHNTSTLIQPMNQGVILSCKRLYRWKQLEESLV 352
LL A E L G P S+ P+ V+ + K YR + L +
Sbjct: 264 LL-----AARVVEELAGLPGLYHVKLLPLAASSTTPPLPSSVVRAFKAHYRHRLLGKLAA 318
Query: 353 IFEESDDEQ-EKGDKGVSKIKIYNIKSAIFNWAK 385
I E D + G++ + ++ SA WAK
Sbjct: 319 IQSERDGTSLAEAGAGITVLDALHVASAA--WAK 350
>gi|49619234 hypothetical protein LOC92806 [Homo sapiens]
Length = 187
Score = 44.7 bits (104), Expect = 2e-04
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 13/163 (7%)
Query: 10 LNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQDMPLVGAEKR 69
+ L+ K++VL R EAG L + ++ ST I+ +K+ I Q + A +
Sbjct: 22 ITLDLKLEVLRRFEAGEKLSQIAKALDLAISTVATIRDSKEKIK--ASSQIATPLRASRL 79
Query: 70 KRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAE--RFARCFGRTD----FKAST 123
R A ++ + +W + + + +Q AE R G F AS
Sbjct: 80 TRHRSAVMESMEQLLSLWLEDQSQPNATLSAAIVQEKAEFDDLQREHGEGSQTERFHASQ 139
Query: 124 GWLFRFRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLSMIIKE 166
GWL RF+ H + + K + S+ N + + + L II+E
Sbjct: 140 GWLVRFKECHCLPHFK-----MNSAAPSNKDMYTEMLKSIIEE 177
>gi|207113199 erythrocyte membrane protein band 4.1-like 2 isoform b
[Homo sapiens]
Length = 673
Score = 36.2 bits (82), Expect = 0.080
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 384 AKSWEEVKQITIANAWENLLYKKEPEYDFQGLEHGDYREILEKCGELETKLDDDRVWLNG 443
AK + K+ T A E +L K+EP + Q GD E+ +K E++ ++ +++ ++
Sbjct: 93 AKDGGDKKEPTQAVVEEQVLDKEEPLPEEQRQAKGDAEEMAQKKQEIKVEVKEEKPSVS- 151
Query: 444 DEEKGCLLKTKGGITKEVVQKGGEAEKQTAEFKL---SAVRESLDYLLDFVDATPEFQRF 500
EEK + K + T+ V ++ E K+T E KL +A RE T E Q
Sbjct: 152 KEEKPSVSKVEMQPTELVSKEREEKVKETQEDKLEGGAAKRE-----------TKEVQTN 200
Query: 501 HFTLKEMQQEIVKK 514
++ Q++ KK
Sbjct: 201 ELKAEKASQKVTKK 214
>gi|207113195 erythrocyte membrane protein band 4.1-like 2 isoform b
[Homo sapiens]
Length = 673
Score = 36.2 bits (82), Expect = 0.080
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 384 AKSWEEVKQITIANAWENLLYKKEPEYDFQGLEHGDYREILEKCGELETKLDDDRVWLNG 443
AK + K+ T A E +L K+EP + Q GD E+ +K E++ ++ +++ ++
Sbjct: 93 AKDGGDKKEPTQAVVEEQVLDKEEPLPEEQRQAKGDAEEMAQKKQEIKVEVKEEKPSVS- 151
Query: 444 DEEKGCLLKTKGGITKEVVQKGGEAEKQTAEFKL---SAVRESLDYLLDFVDATPEFQRF 500
EEK + K + T+ V ++ E K+T E KL +A RE T E Q
Sbjct: 152 KEEKPSVSKVEMQPTELVSKEREEKVKETQEDKLEGGAAKRE-----------TKEVQTN 200
Query: 501 HFTLKEMQQEIVKK 514
++ Q++ KK
Sbjct: 201 ELKAEKASQKVTKK 214
>gi|4503579 erythrocyte membrane protein band 4.1-like 2 isoform a
[Homo sapiens]
Length = 1005
Score = 36.2 bits (82), Expect = 0.080
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 384 AKSWEEVKQITIANAWENLLYKKEPEYDFQGLEHGDYREILEKCGELETKLDDDRVWLNG 443
AK + K+ T A E +L K+EP + Q GD E+ +K E++ ++ +++ ++
Sbjct: 93 AKDGGDKKEPTQAVVEEQVLDKEEPLPEEQRQAKGDAEEMAQKKQEIKVEVKEEKPSVS- 151
Query: 444 DEEKGCLLKTKGGITKEVVQKGGEAEKQTAEFKL---SAVRESLDYLLDFVDATPEFQRF 500
EEK + K + T+ V ++ E K+T E KL +A RE T E Q
Sbjct: 152 KEEKPSVSKVEMQPTELVSKEREEKVKETQEDKLEGGAAKRE-----------TKEVQTN 200
Query: 501 HFTLKEMQQEIVKK 514
++ Q++ KK
Sbjct: 201 ELKAEKASQKVTKK 214
>gi|22027480 pogo transposable element with KRAB domain [Homo
sapiens]
Length = 609
Score = 34.7 bits (78), Expect = 0.23
Identities = 51/271 (18%), Positives = 108/271 (39%), Gaps = 24/271 (8%)
Query: 4 RGKYTTLNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQDMPL 63
RG + + K+ V+ E+ + ++ +FG+ + D +K K + +
Sbjct: 194 RGMRRSYDAGFKLMVVEYAESTNNCQAAK-QFGVLEKNVRDWRKVKPQLQN--------- 243
Query: 64 VGAEKRKRTTGAKYGD---VDDAVYMWYQQKRSAGVPVRGVELQAAAERFARCFGRTD-- 118
R+ G K G VD V + + ++ G P+ +Q A A+ +
Sbjct: 244 -AHAMRRAFRGPKNGRFALVDQRVAEYVRYMQAKGDPITREAMQLKALEIAQEMNIPEKG 302
Query: 119 FKASTGWLFRFRNRH--AIGNRKGCGEQVLSSVSENVEPFRQKLSMIIKEEKLCLAQLYS 176
FKAS GW R R+ ++ ++ + + ++E + +++ + + + +AQ+ +
Sbjct: 303 FKASLGWCRRMMRRYDLSLRHKVPVPQHLPEDLTEKLVTYQRSVLALRRAHDYEVAQMGN 362
Query: 177 GDETDLFWK--SMPENSQASRKDICLPGKKINKERLSAFLCANADGTHKLKSIIIGKSKL 234
DET + + S K + + K +++A L ADG II+ + +
Sbjct: 363 ADETPICLEVPSRVTVDNQGEKPVLVKTPGREKLKITAMLGVLADGRKLPPYIILRGTYI 422
Query: 235 PKSVKEDTSTLPVIYKPSKDVWFTRELFSEW 265
P + + + W T +L +W
Sbjct: 423 PPGKFPSGMEI----RCHRYGWMTEDLMQDW 449
>gi|239756639 PREDICTED: similar to hCG1802057 [Homo sapiens]
Length = 86
Score = 33.5 bits (75), Expect = 0.52
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 12 LEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLI 52
L EK++VL ++++G S +V E +++ST IKK +K I
Sbjct: 3 LTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEI 43
>gi|239751125 PREDICTED: hypothetical protein XP_002347719 [Homo
sapiens]
Length = 86
Score = 33.5 bits (75), Expect = 0.52
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 12 LEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLI 52
L EK++VL ++++G S +V E +++ST IKK +K I
Sbjct: 3 LTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEI 43
>gi|239745616 PREDICTED: hypothetical protein XP_002344143 [Homo
sapiens]
Length = 86
Score = 33.5 bits (75), Expect = 0.52
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 12 LEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLI 52
L EK++VL ++++G S +V E +++ST IKK +K I
Sbjct: 3 LTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEI 43
>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
Length = 1780
Score = 33.5 bits (75), Expect = 0.52
Identities = 29/109 (26%), Positives = 59/109 (54%), Gaps = 15/109 (13%)
Query: 369 SKIKIYNIKSAIFNWAKSWEEVKQITIANAWENLLYKKEPEYDFQGLEHGDYREILEKCG 428
S KI N+K A +W S E++ + E+L+ + E + Q +E ++L++
Sbjct: 508 SNSKILNVKRATISWENSLEDLMED------EDLVEELENAEETQNVE----TKLLDE-- 555
Query: 429 ELETKLDDDRVWLNGDEEKGCLLKTKGGITKEVVQKGGEAEKQTAEFKL 477
+L+ L++++ +++ EEK LL + K+++ + + EK T EFK+
Sbjct: 556 DLDKTLEENKAFIS-HEEKRKLLDLIEDLKKKLINE--KKEKLTLEFKI 601
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 32.7 bits (73), Expect = 0.88
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 355 EESDDEQEKGDKGVSKIKIYNIKSAIFNWAKSWEEVKQI---------TIANAWENLLYK 405
EE +EK K K+ + + +W K+W+E KQ+ WE L +
Sbjct: 1432 EEMATLEEKVVKQEGKLVMIERTPSWQDWKKAWDEWKQVHGETRKSWKAWKEEWEKRLLQ 1491
Query: 406 KEPEYDFQGLEHGDYREILEKCGELETKLDDDRVWLN--GDEEKGCLLKTKGGIT--KEV 461
+E + G + E+L++ +L+ + + +VW N + K K + +T +EV
Sbjct: 1492 EEEKLHQAGEKLSPEEEMLQEDKKLKWE-EWKQVWENMLSSKSKEQQYKDEEEVTLEEEV 1550
Query: 462 VQKGGEAEKQTAE 474
++G E E+Q E
Sbjct: 1551 SREGEEKEQQVTE 1563
>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
[Homo sapiens]
Length = 6907
Score = 32.7 bits (73), Expect = 0.88
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 360 EQEKGDKGVSKIKIYNIKSAIFNWAKSWEEVKQITIANAWENLLYKKEPEYDFQGLEHGD 419
E+EK G KIK N+ + + + K E + + + WE + + + +Y Q +E+ +
Sbjct: 2568 EKEKDSLGNLKIKWENLSNHVTDMDKKLLESQIKQLEHGWEQVEQQIQKKYSQQVVEYDE 2627
Query: 420 YREILEKCGELETKLDDDR 438
+ ++ K + E L +
Sbjct: 2628 FTTLMNKVQDTEISLQQQQ 2646
>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1
[Homo sapiens]
Length = 6885
Score = 32.7 bits (73), Expect = 0.88
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 360 EQEKGDKGVSKIKIYNIKSAIFNWAKSWEEVKQITIANAWENLLYKKEPEYDFQGLEHGD 419
E+EK G KIK N+ + + + K E + + + WE + + + +Y Q +E+ +
Sbjct: 2568 EKEKDSLGNLKIKWENLSNHVTDMDKKLLESQIKQLEHGWEQVEQQIQKKYSQQVVEYDE 2627
Query: 420 YREILEKCGELETKLDDDR 438
+ ++ K + E L +
Sbjct: 2628 FTTLMNKVQDTEISLQQQQ 2646
>gi|151301127 dynein, axonemal, heavy chain 7 [Homo sapiens]
Length = 4024
Score = 32.0 bits (71), Expect = 1.5
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 469 EKQTAEFKLSAVRESLDYLLDFVDATPEFQR----FHFTLKEMQQE-----IVKKQFQSK 519
EK ++ K A +L L V P +Q+ FH ++K+ + + +Q ++
Sbjct: 27 EKLASKEKFKAPARALPQL-SMVSTKPHWQQAAPSFHLSVKQDDESPEPFSVKNEQSHAE 85
Query: 520 IHSRIGSFLKPRPHNIKDSFSGPSTSGS 547
R G K PH + DS+ GPSTS S
Sbjct: 86 YMERFGKKGK-LPHQVDDSYVGPSTSKS 112
>gi|188497705 BRCA1 associated protein [Homo sapiens]
Length = 592
Score = 30.4 bits (67), Expect = 4.4
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 16/80 (20%)
Query: 399 WENLLYK--KEPEYDFQGLEHGDYREILEKCGELETKLDDDRVWLNGDEEKGCLLKTKGG 456
WEN + + K+ + ++ ++E +EKC LE KL+D LLK K
Sbjct: 423 WENKIVRIEKDTAEEINNMKT-KFKETIEKCDNLEHKLND-------------LLKEKQS 468
Query: 457 ITKEVVQKGGEAEKQTAEFK 476
+ ++ Q + K T E K
Sbjct: 469 VERKCTQLNTKVAKLTNELK 488
>gi|222537747 hypothetical protein LOC342979 [Homo sapiens]
Length = 673
Score = 30.0 bits (66), Expect = 5.7
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 18/103 (17%)
Query: 390 VKQITIANAWENLLYKKEPEYDFQGLEHGDYREI---------LEKCGELETKLDDDRVW 440
V+++T++ WE LL + + G E GD + E+ E E + ++ +
Sbjct: 344 VERVTLSEEWEELLVEGLEGPEVAGRERGDESPLGAEGAKTGGGEETWEAEKRKAEESMG 403
Query: 441 LNGDEEKGC---------LLKTKGGITKEVVQKGGEAEKQTAE 474
+ +E+ G +++ KGG K ++ G AEK E
Sbjct: 404 IGSEEKPGTGRDEAEMSPVVERKGGEKKLELESRGSAEKLGTE 446
>gi|64085252 hypothetical protein LOC145508 [Homo sapiens]
Length = 1094
Score = 30.0 bits (66), Expect = 5.7
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 143 EQVLSSVSENVEPFRQKLSMIIKEEKLCLAQLYSG---------DETDLFWKSMPENSQA 193
E+ L SE V+ K + I+KE+ QLY+ + D+ K + +
Sbjct: 501 ERALEKQSETVDELTGKNNQILKEKDELKTQLYAALQQIENLRKELNDVLTKRALQEEEL 560
Query: 194 SRKDICLPGKKINKERLSAFLCANADGTHKLKSIIIGKSKLPKSVKEDTSTL 245
K+ L K ++ L + + D H+L+S + +SK+ +K + + L
Sbjct: 561 HSKEEKLRDIKSHQADLELEVKNSLDTIHRLESELKKQSKIQSQMKVEKAHL 612
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,547,481
Number of Sequences: 37866
Number of extensions: 902275
Number of successful extensions: 2272
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2179
Number of HSP's gapped (non-prelim): 58
length of query: 549
length of database: 18,247,518
effective HSP length: 107
effective length of query: 442
effective length of database: 14,195,856
effective search space: 6274568352
effective search space used: 6274568352
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.