Guide to the Human Genome
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Name: EPB41L2 Sequence: fasta or formatted (1005aa) NCBI GI: 4503579
Description:

erythrocyte membrane protein band 4.1-like 2 isoform a

Referenced in:

Cytoskeleton

Other entries for this name:
alt prot [673aa] erythrocyte membrane protein band 4.1-like 2 isoform b
alt prot [673aa] erythrocyte membrane protein band 4.1-like 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         59           2
 C cysteine            0.9          9           2
 D aspartate           4.8         48           1
 E glutamate          13.0        131           3
 F phenylalanine       2.2         22           1
 G glycine             5.8         58           2
 H histidine           2.4         24           2
 I isoleucine          4.7         47           2
 K lysine              8.9         89           2
 L leucine             7.1         71           2
 M methionine          1.2         12           1
 N asparagine          2.1         21           1
 P proline             5.6         56           3
 Q glutamine           5.8         58           2
 R arginine            5.3         53           2
 S serine              8.3         83           6
 T threonine           6.7         67           5
 V valine              7.3         73           3
 W tryptophan          0.6          6           1
 Y tyrosine            1.8         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   erythrocyte membrane protein band 4.1-like 2 isoform ... 
EPB41L2               0.609   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L2               0.609   erythrocyte membrane protein band 4.1-like 2 isofor...
EPB41L1               0.349   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41L1               0.342   erythrocyte membrane protein band 4.1-like 1 isoform...
EPB41                 0.305   erythrocyte membrane protein band 4.1 (elliptocytosis...
EPB41                 0.304   erythrocyte membrane protein band 4.1 (elliptocytosi...
EPB41L3               0.285   erythrocyte membrane protein band 4.1-like 3 
EPB41                 0.279   erythrocyte membrane protein band 4.1 (elliptocytosi...
PTPN4                 0.146   protein tyrosine phosphatase, non-receptor type 4 [Ho...
EPB41L5               0.137   erythrocyte membrane protein band 4.1 like 5 
EPB41L4B              0.127   erythrocyte membrane protein band 4.1 like 4B isofo...
EPB41L4B              0.127   erythrocyte membrane protein band 4.1 like 4B isofo...
FARP1                 0.124   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
FRMD5                 0.118   FERM domain containing 5 isoform 2 
FRMD3                 0.117   FERM domain containing 3 
FARP2                 0.115   FERM, RhoGEF and pleckstrin domain protein 2 
EPB41L4A              0.113   erythrocyte protein band 4.1-like 4 
FRMD7                 0.108   FERM domain containing 7 
PTPN3                 0.102   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.102   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN21                0.069   protein tyrosine phosphatase, non-receptor type 21 ...
PTPN3                 0.064   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.064   protein tyrosine phosphatase, non-receptor type 3 i...
EZR                   0.060   ezrin 
EZR                   0.060   ezrin 
MSN                   0.058   moesin 
PTPN14                0.055   protein tyrosine phosphatase, non-receptor type 14 [...
RDX                   0.054   radixin 
NF2                   0.053   neurofibromin 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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