UBAP2 14559

Name: UBAP2	Sequence: fasta or formatted (1119aa)		NCBI GI: 22325364
Description: ubiquitin associated protein 2		Referenced in: Small RNAs in RNA Processing Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 92 2 C cysteine 0.9 10 1 D aspartate 3.4 38 2 E glutamate 3.7 41 2 F phenylalanine 2.6 29 1 G glycine 8.4 94 3 H histidine 2.8 31 3 I isoleucine 2.1 24 1 K lysine 4.1 46 3 L leucine 7.2 81 2 M methionine 1.4 16 2 N asparagine 4.6 52 3 P proline 8.8 98 3 Q glutamine 7.2 81 3 R arginine 2.7 30 2 S serine 16.4 184 5 T threonine 7.9 88 4 V valine 4.5 50 2 W tryptophan 0.6 7 1 Y tyrosine 2.4 27 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin associated protein 2 UBAP2L 0.383 ubiquitin associated protein 2-like isoform a [Homo... UBAP2L 0.327 ubiquitin associated protein 2-like isoform b [Homo... MUC4 0.032 mucin 4 isoform a LOC100288540 0.025 PREDICTED: hypothetical protein XP_002342775 MUC16 0.024 mucin 16 MUC12 0.024 PREDICTED: mucin 12 MUC21 0.024 mucin 21 POM121C 0.023 POM121 membrane glycoprotein (rat)-like MUC12 0.023 PREDICTED: mucin 12 MUC12 0.023 PREDICTED: mucin 12, cell surface associated POM121 0.023 nuclear pore membrane protein 121 MLL 0.022 myeloid/lymphoid or mixed-lineage leukemia protein [... DSPP 0.022 dentin sialophosphoprotein preproprotein MUC17 0.022 mucin 17 LOC100130716 0.021 PREDICTED: similar to mucin 11 MUC6 0.021 mucin 6, gastric NUP214 0.020 nucleoporin 214kDa LOC729792 0.020 PREDICTED: hypothetical protein LOC100294136 0.020 PREDICTED: hypothetical protein LOC100294091 0.020 PREDICTED: hypothetical protein MUC5B 0.020 mucin 5, subtype B, tracheobronchial LOC732156 0.019 PREDICTED: similar to Mucin-3A LOC100133756 0.019 PREDICTED: hypothetical protein, partial LOC100131514 0.018 PREDICTED: similar to hCG1747327, partial MUC3B 0.018 PREDICTED: mucin 3B, cell surface associated, parti... MUC5AC 0.018 mucin 5AC LOC100134138 0.018 PREDICTED: similar to mucin, partial LOC100133761 0.018 PREDICTED: similar to Mucin-6, partial LOC100133714 0.018 PREDICTED: similar to Mucin-12, partial Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.