Guide to the Human Genome
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Name: LOC732156 Sequence: fasta or formatted (596aa) NCBI GI: 239508973
Description:

PREDICTED: similar to Mucin-3A

Referenced in:

Mucins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         26           2
 C cysteine            1.8         11           1
 D aspartate           1.8         11           1
 E glutamate           3.2         19           1
 F phenylalanine       2.3         14           1
 G glycine             3.7         22           2
 H histidine           1.8         11           1
 I isoleucine          4.7         28           2
 K lysine              1.3          8           1
 L leucine             6.7         40           2
 M methionine          1.7         10           1
 N asparagine          1.8         11           1
 P proline             8.7         52           2
 Q glutamine           2.5         15           1
 R arginine            2.3         14           1
 S serine             17.3        103           3
 T threonine          26.3        157           4
 V valine              5.2         31           1
 W tryptophan          0.8          5           1
 Y tyrosine            1.3          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Mucin-3A 
MUC3A                 0.712   PREDICTED: mucin 3A, intestinal 
LOC100131514          0.560   PREDICTED: similar to hCG1747327, partial 
MUC3B                 0.404   PREDICTED: mucin 3B, partial 
LOC100131514          0.344   PREDICTED: similar to intestinal mucin MUC3B 
MUC3A                 0.261   PREDICTED: mucin 3A, cell surface associated, parti...
LOC100133790          0.260   PREDICTED: intestinal mucin-like, partial 
MUC3B                 0.218   PREDICTED: mucin 3B, cell surface associated, parti...
MUC2                  0.149   mucin 2 precursor 
MUC17                 0.139   mucin 17 
LOC100294420          0.138   PREDICTED: similar to mucin 2 
MUC5B                 0.115   mucin 5, subtype B, tracheobronchial 
LOC100133408          0.109   PREDICTED: similar to mucin 
MUC5AC                0.107   mucin 5AC 
LOC100294249          0.105   PREDICTED: hypothetical protein XP_002344067 
LOC729792             0.104   PREDICTED: hypothetical protein 
LOC729792             0.104   PREDICTED: hypothetical protein 
LOC729792             0.104   PREDICTED: hypothetical protein 
LOC100294501          0.104   PREDICTED: hypothetical protein 
LOC100294238          0.104   PREDICTED: hypothetical protein 
LOC100294204          0.104   PREDICTED: hypothetical protein 
LOC100294136          0.104   PREDICTED: hypothetical protein 
LOC100294091          0.104   PREDICTED: hypothetical protein 
LOC730401             0.104   PREDICTED: hypothetical protein 
MUC6                  0.104   mucin 6, gastric 
LOC100134138          0.101   PREDICTED: similar to mucin, partial 
LOC100294236          0.091   PREDICTED: similar to diffuse panbronchiolitis crit...
MUC4                  0.089   mucin 4 isoform a 
MUC12                 0.081   PREDICTED: mucin 12 
ZAN                   0.079   zonadhesin isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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