Guide to the Human Genome
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Name: EML1 Sequence: fasta or formatted (815aa) NCBI GI: 56790930
Description:

echinoderm microtubule associated protein like 1 isoform b

Referenced in:

Tubulins and Microtubules

Other entries for this name:
alt prot [834aa] echinoderm microtubule associated protein like 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         40           2
 C cysteine            2.1         17           1
 D aspartate           6.4         52           2
 E glutamate           4.9         40           2
 F phenylalanine       3.8         31           2
 G glycine             8.8         72           3
 H histidine           3.2         26           1
 I isoleucine          4.5         37           2
 K lysine              5.8         47           2
 L leucine             7.6         62           2
 M methionine          1.2         10           1
 N asparagine          4.2         34           2
 P proline             3.8         31           2
 Q glutamine           3.4         28           2
 R arginine            4.9         40           2
 S serine              9.9         81           5
 T threonine           7.6         62           2
 V valine              8.1         66           3
 W tryptophan          2.0         16           1
 Y tyrosine            2.8         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   echinoderm microtubule associated protein like 1 iso... 
EML1                  0.993   echinoderm microtubule associated protein like 1 iso...
EML2                  0.581   echinoderm microtubule associated protein like 2 [Hom...
EML4                  0.555   echinoderm microtubule associated protein like 4 is...
EML4                  0.544   echinoderm microtubule associated protein like 4 iso...
EML3                  0.455   echinoderm microtubule associated protein like 3 [H...
EML6                  0.224   echinoderm microtubule associated protein like 6 [H...
EML5                  0.217   echinoderm microtubule associated protein like 5 [Ho...
WDR52                 0.036   WD repeat domain 52 
WDR90                 0.030   WD repeat domain 90 
MAPKBP1               0.029   mitogen-activated protein kinase binding protein 1 ...
TAF5                  0.028   TBP-associated factor 5 
WDR62                 0.027   WD repeat domain 62 isoform 1 
WDR62                 0.027   WD repeat domain 62 isoform 2 
MAPKBP1               0.023   mitogen-activated protein kinase binding protein 1 ...
TBL1XR1               0.022   transducin (beta)-like 1 X-linked receptor 1 
TBL1X                 0.022   transducin beta-like 1X isoform b 
TBL1X                 0.022   transducin beta-like 1X isoform b 
TBL1X                 0.022   transducin beta-like 1X isoform a 
TBL1X                 0.022   transducin beta-like 1X isoform a 
WDR69                 0.022   WD repeat domain 69 
WDR16                 0.021   WD40-repeat protein upregulated in HCC isoform b [H...
WDR51A                0.019   WD repeat domain 51A isoform 2 
WDR51A                0.019   WD repeat domain 51A isoform 1 
WDR51B                0.019   WD repeat domain 51B 
WDR66                 0.019   WD repeat domain 66 
TAF5L                 0.018   PCAF associated factor 65 beta isoform a 
WDR5                  0.018   WD repeat domain 5 
WDR5                  0.018   WD repeat domain 5 
PWP2                  0.018   PWP2 periodic tryptophan protein homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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