Guide to the Human Genome
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Name: EML2 Sequence: fasta or formatted (649aa) NCBI GI: 6912356
Description:

echinoderm microtubule associated protein like 2

Referenced in:

Tubulins and Microtubules
WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         39           1
 C cysteine            2.6         17           2
 D aspartate           6.8         44           2
 E glutamate           4.3         28           2
 F phenylalanine       3.5         23           1
 G glycine            10.6         69           3
 H histidine           4.2         27           1
 I isoleucine          3.1         20           2
 K lysine              4.0         26           1
 L leucine             9.4         61           3
 M methionine          1.2          8           2
 N asparagine          2.3         15           1
 P proline             3.5         23           2
 Q glutamine           2.6         17           1
 R arginine            4.5         29           2
 S serine              8.6         56           2
 T threonine           6.6         43           2
 V valine             10.5         68           2
 W tryptophan          2.6         17           1
 Y tyrosine            2.9         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   echinoderm microtubule associated protein like 2 [Hom... 
EML1                  0.723   echinoderm microtubule associated protein like 1 iso...
EML1                  0.723   echinoderm microtubule associated protein like 1 iso...
EML4                  0.600   echinoderm microtubule associated protein like 4 is...
EML4                  0.600   echinoderm microtubule associated protein like 4 iso...
EML3                  0.527   echinoderm microtubule associated protein like 3 [H...
EML6                  0.287   echinoderm microtubule associated protein like 6 [H...
EML5                  0.275   echinoderm microtubule associated protein like 5 [Ho...
WDR90                 0.051   WD repeat domain 90 
WDR52                 0.045   WD repeat domain 52 
TAF5                  0.044   TBP-associated factor 5 
TBL1X                 0.034   transducin beta-like 1X isoform b 
TBL1X                 0.034   transducin beta-like 1X isoform b 
TBL1X                 0.034   transducin beta-like 1X isoform a 
TBL1X                 0.034   transducin beta-like 1X isoform a 
MAPKBP1               0.034   mitogen-activated protein kinase binding protein 1 ...
TBL1XR1               0.033   transducin (beta)-like 1 X-linked receptor 1 
WDR69                 0.032   WD repeat domain 69 
TAF5L                 0.032   PCAF associated factor 65 beta isoform a 
TBL1Y                 0.031   transducin beta-like 1Y 
TBL1Y                 0.031   transducin beta-like 1Y 
TBL1Y                 0.031   transducin beta-like 1Y 
MAPKBP1               0.030   mitogen-activated protein kinase binding protein 1 ...
WDR62                 0.030   WD repeat domain 62 isoform 1 
WDR62                 0.030   WD repeat domain 62 isoform 2 
WDR65                 0.030   WD repeat domain 65 
WDSUB1                0.026   WD repeat, sterile alpha motif and U-box domain con...
WDSUB1                0.026   WD repeat, sterile alpha motif and U-box domain con...
WDSUB1                0.026   WD repeat, sterile alpha motif and U-box domain con...
WDR51B                0.026   WD repeat domain 51B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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