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Search of human proteins with 222831587
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|222831587 tRNA methyltransferase 61 homolog B [Homo sapiens]
(477 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|222831587 tRNA methyltransferase 61 homolog B [Homo sapiens] 974 0.0
gi|123173772 tRNA(m1A58)-methyltransferase subunit TRM61 [Homo s... 47 3e-05
gi|83921609 hypothetical protein LOC127254 [Homo sapiens] 32 0.97
gi|34482047 adaptor-related protein complex 3, beta 2 subunit [H... 32 1.3
gi|148298722 zinc finger protein 185 [Homo sapiens] 31 2.2
gi|21735492 protein phosphatase 1, regulatory (inhibitor) subuni... 31 2.8
gi|31415880 protein phosphatase 1, regulatory (inhibitor) subuni... 31 2.8
gi|154354972 phosphatase and actin regulator 2 isoform 4 [Homo s... 31 2.8
gi|154354970 phosphatase and actin regulator 2 isoform 2 [Homo s... 31 2.8
gi|190886442 arrestin domain containing 4 [Homo sapiens] 31 2.8
gi|224586853 sorbin and SH3 domain containing 2 isoform 7 [Homo ... 30 3.7
gi|133908621 perforin 1 precursor [Homo sapiens] 30 3.7
gi|40254808 perforin 1 precursor [Homo sapiens] 30 3.7
gi|33946327 nucleoporin 214kDa [Homo sapiens] 30 3.7
gi|10947118 sorbin and SH3 domain containing 2 isoform 2 [Homo s... 30 3.7
gi|145309313 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac... 30 3.7
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 30 4.8
gi|239756174 PREDICTED: hypothetical protein [Homo sapiens] 30 4.8
gi|239750672 PREDICTED: hypothetical protein [Homo sapiens] 30 4.8
gi|239744982 PREDICTED: hypothetical protein [Homo sapiens] 30 4.8
gi|150417984 ATP-binding cassette, sub-family A, member 7 [Homo ... 30 4.8
gi|38605733 nucleoporin 43kDa [Homo sapiens] 30 4.8
gi|7662146 DnaJ (Hsp40) homolog, subfamily C, member 6 [Homo sap... 30 6.3
gi|7657198 dimethyladenosine transferase [Homo sapiens] 30 6.3
gi|156104862 ankyrin repeat domain 38 [Homo sapiens] 30 6.3
gi|239749583 PREDICTED: similar to hCG1794531 [Homo sapiens] 29 8.2
gi|239743799 PREDICTED: similar to hCG1794531 [Homo sapiens] 29 8.2
gi|239743758 PREDICTED: similar to hCG1794531 [Homo sapiens] 29 8.2
gi|226530908 protein-L-isoaspartate (D-aspartate) O-methyltransf... 29 8.2
gi|170932473 zinc finger protein 786 [Homo sapiens] 29 8.2
>gi|222831587 tRNA methyltransferase 61 homolog B [Homo sapiens]
Length = 477
Score = 974 bits (2518), Expect = 0.0
Identities = 477/477 (100%), Positives = 477/477 (100%)
Query: 1 MLMAWCRGPVLLCLRQGLGTNSFLHGLGQEPFEGARSLCCRSSPRDLRDGEREHEAAQRK 60
MLMAWCRGPVLLCLRQGLGTNSFLHGLGQEPFEGARSLCCRSSPRDLRDGEREHEAAQRK
Sbjct: 1 MLMAWCRGPVLLCLRQGLGTNSFLHGLGQEPFEGARSLCCRSSPRDLRDGEREHEAAQRK 60
Query: 61 APGAESCPSLPLSISDIGTGCLSSLENLRLPTLREESSPRELEDSSGDQGRCGPTHQGSE 120
APGAESCPSLPLSISDIGTGCLSSLENLRLPTLREESSPRELEDSSGDQGRCGPTHQGSE
Sbjct: 61 APGAESCPSLPLSISDIGTGCLSSLENLRLPTLREESSPRELEDSSGDQGRCGPTHQGSE 120
Query: 121 DPSMLSQAQSATEVEERHVSPSCSTSRERPFQAGELILAETGEGETKFKKLFRLNNFGLL 180
DPSMLSQAQSATEVEERHVSPSCSTSRERPFQAGELILAETGEGETKFKKLFRLNNFGLL
Sbjct: 121 DPSMLSQAQSATEVEERHVSPSCSTSRERPFQAGELILAETGEGETKFKKLFRLNNFGLL 180
Query: 181 NSNWGAVPFGKIVGKFPGQILRSSFGKQYMLRRPALEDYVVLMKRGTAITFPKDINMILS 240
NSNWGAVPFGKIVGKFPGQILRSSFGKQYMLRRPALEDYVVLMKRGTAITFPKDINMILS
Sbjct: 181 NSNWGAVPFGKIVGKFPGQILRSSFGKQYMLRRPALEDYVVLMKRGTAITFPKDINMILS 240
Query: 241 MMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKL 300
MMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKL
Sbjct: 241 MMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKL 300
Query: 301 SHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV 360
SHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV
Sbjct: 301 SHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV 360
Query: 361 VNITQVIELLDGIRTCELALSCEKISEVIVRDWLVCLAKQKNGILAQKVESKINTDVQLD 420
VNITQVIELLDGIRTCELALSCEKISEVIVRDWLVCLAKQKNGILAQKVESKINTDVQLD
Sbjct: 361 VNITQVIELLDGIRTCELALSCEKISEVIVRDWLVCLAKQKNGILAQKVESKINTDVQLD 420
Query: 421 SQEKIGVKGELFQEDDHEESHSDFPYGSFPYVARPVHWQPGHTAFLVKLRKVKPQLN 477
SQEKIGVKGELFQEDDHEESHSDFPYGSFPYVARPVHWQPGHTAFLVKLRKVKPQLN
Sbjct: 421 SQEKIGVKGELFQEDDHEESHSDFPYGSFPYVARPVHWQPGHTAFLVKLRKVKPQLN 477
>gi|123173772 tRNA(m1A58)-methyltransferase subunit TRM61 [Homo
sapiens]
Length = 289
Score = 47.4 bits (111), Expect = 3e-05
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 19/198 (9%)
Query: 192 IVGKFPGQILRSSFGKQYMLRRPALEDYVVLMKRGTAITFPKDINMILSMMDINPGDTVL 251
++G+ G + G + P E + + + T I + DI +I M+++ PG V
Sbjct: 49 LIGRPFGSKVTCGRGGWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVC 108
Query: 252 EAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD 311
E+G+GSG +S + + + G + + E + + A++ ++ R V W V
Sbjct: 109 ESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHR-------VGRW---VT 158
Query: 312 FIHKDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLK-HGGVCAVYVVNITQVIELL 370
+D+ + + + DAV LD+ +P + + LK GG + I QV
Sbjct: 159 VRTQDVCRSGFGVSHVA-DAVFLDIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQV---- 213
Query: 371 DGIRTCELALSCEKISEV 388
RTC+ AL+ SE+
Sbjct: 214 --QRTCQ-ALAARGFSEL 228
>gi|83921609 hypothetical protein LOC127254 [Homo sapiens]
Length = 1530
Score = 32.3 bits (72), Expect = 0.97
Identities = 31/126 (24%), Positives = 44/126 (34%), Gaps = 31/126 (24%)
Query: 24 LHGLGQEPFEGARSLCCRSSPRDLRDGEREHEAAQRKAPGAESCPSLPLSISDIGTGCLS 83
++G+ Q P + +D D E+E E + +KAP A ++ D GC
Sbjct: 523 MNGIPQSPLD---------DKKDNLDPEKESETSSQKAPDARD------NVKDENDGCSE 567
Query: 84 SLENLRLPTLREESSPRELEDSSGDQGRCGPTHQGSEDPSMLSQAQSATEVEERHVSPSC 143
S ELE+ D T S S S+ +SA E H S
Sbjct: 568 S----------------ELEEDKQDMKTASSTSSRSHPYSSDSEDESAVGDREAHTDSST 611
Query: 144 STSRER 149
S R
Sbjct: 612 DESARR 617
>gi|34482047 adaptor-related protein complex 3, beta 2 subunit [Homo
sapiens]
Length = 1082
Score = 32.0 bits (71), Expect = 1.3
Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 11/94 (11%)
Query: 60 KAPGAESCPSLPLSISDIGTGCLSSLENLRLP-----TLREESSPRELEDSSGDQGRCGP 114
KA G + P P D S+ N+ +P + RE+ +E S +G GP
Sbjct: 634 KATGYQELPDWPEEAPD------PSVRNVEVPEWTKCSNREKRKEKEKPFYSDSEGESGP 687
Query: 115 THQGSEDPSMLSQAQSATEVEERHVSPSCSTSRE 148
T DP S++ S + E S + E
Sbjct: 688 TESADSDPESESESDSKSSSESGSGESSSESDNE 721
>gi|148298722 zinc finger protein 185 [Homo sapiens]
Length = 689
Score = 31.2 bits (69), Expect = 2.2
Identities = 39/156 (25%), Positives = 56/156 (35%), Gaps = 32/156 (20%)
Query: 28 GQEPFEGARSLCCRSSPRDLRDGEREHEAAQRKAPGAESCPSLPLSISDIGT--GCLSSL 85
G+E F + RSS + L DG A + G L+ DIG+ G S+
Sbjct: 327 GEEAFRAPNTDAARSSAQ-LSDGNVGSGATGSRPEG--------LAAVDIGSERGSSSAT 377
Query: 86 ENLRLPTLREESSPRELEDSSGD---------------------QGRCGPTHQGSEDPSM 124
+P R+ +S ED+ D Q R G G DP++
Sbjct: 378 SVSAVPADRKSNSTAAQEDAKADPKGALADYEGKDVATRVGEAWQERPGAPRGGQGDPAV 437
Query: 125 LSQAQSATEVEERHVSPSCSTSRERPFQAGELILAE 160
+Q + ER SPS S R G +L +
Sbjct: 438 PAQQPADPSTPERQSSPSGSEQLVRRESCGSSVLTD 473
>gi|21735492 protein phosphatase 1, regulatory (inhibitor) subunit
1B isoform 1 [Homo sapiens]
Length = 204
Score = 30.8 bits (68), Expect = 2.8
Identities = 36/145 (24%), Positives = 53/145 (36%), Gaps = 37/145 (25%)
Query: 42 SSPRDLRDGEREHEAAQRKAPGAESCPSLPLSISDIGTGCLSSLENL----------RLP 91
+SP GE H ++R P A + PSL ++ I L S+ NL L
Sbjct: 51 ASPHQRASGEGHHLKSKRPNPCAYTPPSLK-AVQRIAESHLQSISNLNENQASEEEDELG 109
Query: 92 TLREESSPRE-------------------------LEDSSGDQGRCGPTHQGS-EDPSML 125
LRE PRE + S+G + CG +G E P L
Sbjct: 110 ELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQGLEGPWERPPPL 169
Query: 126 SQAQSATEVEERHVSPSCSTSRERP 150
+++ E++ P+ S E P
Sbjct: 170 DESERDGGSEDQVEDPALSEPGEEP 194
>gi|31415880 protein phosphatase 1, regulatory (inhibitor) subunit
1B isoform 2 [Homo sapiens]
Length = 168
Score = 30.8 bits (68), Expect = 2.8
Identities = 36/145 (24%), Positives = 53/145 (36%), Gaps = 37/145 (25%)
Query: 42 SSPRDLRDGEREHEAAQRKAPGAESCPSLPLSISDIGTGCLSSLENL----------RLP 91
+SP GE H ++R P A + PSL ++ I L S+ NL L
Sbjct: 15 ASPHQRASGEGHHLKSKRPNPCAYTPPSLK-AVQRIAESHLQSISNLNENQASEEEDELG 73
Query: 92 TLREESSPRE-------------------------LEDSSGDQGRCGPTHQGS-EDPSML 125
LRE PRE + S+G + CG +G E P L
Sbjct: 74 ELRELGYPREEDEEEEEDDEEEEEEEDSQAEVLKVIRQSAGQKTTCGQGLEGPWERPPPL 133
Query: 126 SQAQSATEVEERHVSPSCSTSRERP 150
+++ E++ P+ S E P
Sbjct: 134 DESERDGGSEDQVEDPALSEPGEEP 158
>gi|154354972 phosphatase and actin regulator 2 isoform 4 [Homo
sapiens]
Length = 554
Score = 30.8 bits (68), Expect = 2.8
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 94 REESSPRELEDSSGDQGRCGPTHQGSEDPSMLSQAQSATEVEERHVSPSCSTSRERPFQA 153
REE+ + E + + P + +ED S T + SPS S++ RP +
Sbjct: 111 REENVVKSEEGNGSVSEKTPPLEEQAEDKKAGSSHSKKTTGSKASASPSTSSTSSRPKAS 170
Query: 154 GELILAETGE-GETKFKK 170
E + ++ G G TK K+
Sbjct: 171 KETVSSKAGTVGTTKGKR 188
>gi|154354970 phosphatase and actin regulator 2 isoform 2 [Homo
sapiens]
Length = 565
Score = 30.8 bits (68), Expect = 2.8
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 94 REESSPRELEDSSGDQGRCGPTHQGSEDPSMLSQAQSATEVEERHVSPSCSTSRERPFQA 153
REE+ + E + + P + +ED S T + SPS S++ RP +
Sbjct: 122 REENVVKSEEGNGSVSEKTPPLEEQAEDKKAGSSHSKKTTGSKASASPSTSSTSSRPKAS 181
Query: 154 GELILAETGE-GETKFKK 170
E + ++ G G TK K+
Sbjct: 182 KETVSSKAGTVGTTKGKR 199
>gi|190886442 arrestin domain containing 4 [Homo sapiens]
Length = 418
Score = 30.8 bits (68), Expect = 2.8
Identities = 58/192 (30%), Positives = 78/192 (40%), Gaps = 36/192 (18%)
Query: 55 EAAQRKAPGAES-CPSLPLSISDIGTGCLSSLENLRLPTLREESSPRELEDSSGD-QGRC 112
EA A GAE SL L D GC SS E + L E S P L + QGR
Sbjct: 4 EAGCAAAVGAEGRVKSLGLVFEDERKGCYSSGETVAGHVLLEASEPVALRALRLEAQGRA 63
Query: 113 GPTHQGSEDPSMLSQAQSAT-------EVEERHVSPSCSTSRERPFQAGE-LILAETGEG 164
+ PS +A ++T EVE +V S RE P AGE +IL + G+
Sbjct: 64 ----TAAWGPSTCPRASASTAALAVFSEVEYLNVRLSL---REPP--AGEGIILLQPGKH 114
Query: 165 ETKFKKLFRLNNFGLLNSNWGAVPFGKIVGKFPGQILRSSFGKQYMLRRPALEDYVVLMK 224
E F+ F+L P +V F G+ + + +L RP + D V K
Sbjct: 115 EFPFR--FQL-------------PSEPLVTSFTGKYGSIQYCVRAVLERPKVPDQSV--K 157
Query: 225 RGTAITFPKDIN 236
R + D+N
Sbjct: 158 RELQVVSHVDVN 169
>gi|224586853 sorbin and SH3 domain containing 2 isoform 7 [Homo
sapiens]
Length = 1004
Score = 30.4 bits (67), Expect = 3.7
Identities = 36/150 (24%), Positives = 52/150 (34%), Gaps = 14/150 (9%)
Query: 15 RQGLGTNSFLHGLGQE-----PFEGARSLCCRSSPRDLRDGEREHEAAQRKAPGAESCPS 69
R L NS LH L E P + R SP + A P C
Sbjct: 652 RGSLPDNSILHRLISELLPDVPERNSSLRALRRSPLHQPLHPLPPDGAIHCPPYQNDCGR 711
Query: 70 LPLSIS--DIGTGCLSSLENLRLPTLREESSPRELEDSSGDQGRCGPTHQGSEDPSMLSQ 127
+P S S D+ T S R L++ SPR + D GR P +
Sbjct: 712 MPRSASFQDVDTANSSCHHQDRGGALQDRESPRSYSSTLTDMGRSAPRERRGTPEKEKLP 771
Query: 128 AQSATEVEERHVSPSCSTSRERPFQAGELI 157
A++ + + TS+E F+ G+ +
Sbjct: 772 AKAVYDFK-------AQTSKELSFKKGDTV 794
>gi|133908621 perforin 1 precursor [Homo sapiens]
Length = 555
Score = 30.4 bits (67), Expect = 3.7
Identities = 41/175 (23%), Positives = 66/175 (37%), Gaps = 21/175 (12%)
Query: 269 GSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLT 328
GS + +F +K H D + + HV P +H D A D+
Sbjct: 149 GSHSQAANFAAQKTHQDQYSFSTDTVECRFYSFHVVHTPP----LHPDFKRALGDLPH-H 203
Query: 329 FDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRTCELALSCEKISEV 388
F+A T P + + + G + V + I L +RTCELAL E +++
Sbjct: 204 FNAS---------TQPAYLRLISNYGTHFIRAVELGGRISALTALRTCELAL--EGLTDN 252
Query: 389 IVRDWLVCLAKQKNGILAQKVESKINTDVQLDSQEKIGVKGELFQEDDHEESHSD 443
V D L A+ GI I+ + + ++K K + E HS+
Sbjct: 253 EVEDCLTVEAQVNIGI-----HGSISAEAKACEEKKKKHKMTASFHQTYRERHSE 302
>gi|40254808 perforin 1 precursor [Homo sapiens]
Length = 555
Score = 30.4 bits (67), Expect = 3.7
Identities = 41/175 (23%), Positives = 66/175 (37%), Gaps = 21/175 (12%)
Query: 269 GSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLT 328
GS + +F +K H D + + HV P +H D A D+
Sbjct: 149 GSHSQAANFAAQKTHQDQYSFSTDTVECRFYSFHVVHTPP----LHPDFKRALGDLPH-H 203
Query: 329 FDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRTCELALSCEKISEV 388
F+A T P + + + G + V + I L +RTCELAL E +++
Sbjct: 204 FNAS---------TQPAYLRLISNYGTHFIRAVELGGRISALTALRTCELAL--EGLTDN 252
Query: 389 IVRDWLVCLAKQKNGILAQKVESKINTDVQLDSQEKIGVKGELFQEDDHEESHSD 443
V D L A+ GI I+ + + ++K K + E HS+
Sbjct: 253 EVEDCLTVEAQVNIGI-----HGSISAEAKACEEKKKKHKMTASFHQTYRERHSE 302
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 30.4 bits (67), Expect = 3.7
Identities = 40/150 (26%), Positives = 57/150 (38%), Gaps = 30/150 (20%)
Query: 43 SPRDLRDGEREHEAAQRKAPGAESCPSLPLSISDIGTGCLSSL-----------ENLRLP 91
S D G + E A P A S P S S GTG + P
Sbjct: 1185 SSGDKASGTAKIETAVTSTPSASGQFSKPFSFSPSGTGFNFGIITPTPSSNFTAAQGATP 1244
Query: 92 TLREESSPRELEDSSGDQGRCGPTHQG---SEDPSMLSQAQSATEVE-----ERHVSPS- 142
+ +E S P D+ G P+++ S PS ++ A + T E R V+PS
Sbjct: 1245 STKESSQP----DAFSSGGGSKPSYEAIPESSPPSGITSASNTTPGEPAASSSRPVAPSG 1300
Query: 143 --CSTSRER----PFQAGELILAETGEGET 166
ST+ + P + GEL+ + GET
Sbjct: 1301 TALSTTSSKLETPPSKLGELLFPSSLAGET 1330
>gi|10947118 sorbin and SH3 domain containing 2 isoform 2 [Homo
sapiens]
Length = 1100
Score = 30.4 bits (67), Expect = 3.7
Identities = 36/150 (24%), Positives = 52/150 (34%), Gaps = 14/150 (9%)
Query: 15 RQGLGTNSFLHGLGQE-----PFEGARSLCCRSSPRDLRDGEREHEAAQRKAPGAESCPS 69
R L NS LH L E P + R SP + A P C
Sbjct: 748 RGSLPDNSILHRLISELLPDVPERNSSLRALRRSPLHQPLHPLPPDGAIHCPPYQNDCGR 807
Query: 70 LPLSIS--DIGTGCLSSLENLRLPTLREESSPRELEDSSGDQGRCGPTHQGSEDPSMLSQ 127
+P S S D+ T S R L++ SPR + D GR P +
Sbjct: 808 MPRSASFQDVDTANSSCHHQDRGGALQDRESPRSYSSTLTDMGRSAPRERRGTPEKEKLP 867
Query: 128 AQSATEVEERHVSPSCSTSRERPFQAGELI 157
A++ + + TS+E F+ G+ +
Sbjct: 868 AKAVYDFK-------AQTSKELSFKKGDTV 890
>gi|145309313 UDP-N-acetyl-alpha-D-galactosamine:polypeptide
N-acetylgalactosaminyltransferase 13 [Homo sapiens]
Length = 556
Score = 30.4 bits (67), Expect = 3.7
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 126 SQAQSATEVEERHVSPSC----STSRERPFQAGELILAETGEGETKFKKLFRLNNFGLLN 181
S+ + +ER + P+ S ++E P + G+ +L + E K K+LF++N F L+
Sbjct: 29 SECNKCDDKKERSLLPALRAVISRNQEGPGEMGKAVLIPKDDQE-KMKELFKINQFNLMA 87
Query: 182 SN 183
S+
Sbjct: 88 SD 89
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 30.0 bits (66), Expect = 4.8
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 96 ESSPRELEDSSGDQGRCGPTHQGSEDPSMLSQAQSATEVEERHVSPSCSTSRE 148
ES E +D+S D G T + S + + Q S +++E R+ S +C+ E
Sbjct: 1199 ESDTEETQDTSVDHNETGNTGESSVEENEKQQNASESKLELRNNSNTCNIENE 1251
>gi|239756174 PREDICTED: hypothetical protein [Homo sapiens]
Length = 625
Score = 30.0 bits (66), Expect = 4.8
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 91 PTLREESSPRELEDSSGDQGRCG--PTHQGSEDPSMLSQAQSATEVEERHVSPSCSTS 146
P EE + E DS GD+ P QG+++P+ S + SA+ R C+ +
Sbjct: 21 PVPEEEKAGAEPGDSGGDEAVASVPPDSQGAQEPAASSASASASAAVPRKAEVPCAAA 78
>gi|239750672 PREDICTED: hypothetical protein [Homo sapiens]
Length = 627
Score = 30.0 bits (66), Expect = 4.8
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 91 PTLREESSPRELEDSSGDQGRCG--PTHQGSEDPSMLSQAQSATEVEERHVSPSCSTS 146
P EE + E DS GD+ P QG+++P+ S + SA+ R C+ +
Sbjct: 21 PVPEEEKAGAEPGDSGGDEAVASVPPDSQGAQEPAASSASASASAAVPRKAEVPCAAA 78
>gi|239744982 PREDICTED: hypothetical protein [Homo sapiens]
Length = 627
Score = 30.0 bits (66), Expect = 4.8
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 91 PTLREESSPRELEDSSGDQGRCG--PTHQGSEDPSMLSQAQSATEVEERHVSPSCSTS 146
P EE + E DS GD+ P QG+++P+ S + SA+ R C+ +
Sbjct: 21 PVPEEEKAGAEPGDSGGDEAVASVPPDSQGAQEPAASSASASASAAVPRKAEVPCAAA 78
>gi|150417984 ATP-binding cassette, sub-family A, member 7 [Homo
sapiens]
Length = 2146
Score = 30.0 bits (66), Expect = 4.8
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 12/116 (10%)
Query: 61 APGAESCPSLPLSIS-DIGTGCLSSLENLRLPTLREESSPRELEDSSGDQGRCGPTHQGS 119
A G C PL + +G+G +L RLP E + ++E S + QGS
Sbjct: 1012 AGGRLCCCGSPLFLRRHLGSGYYLTLVKARLPLTTNEKADTDMEGSVDTRQEKKNGSQGS 1071
Query: 120 E--DPSMLSQAQSATEVEERHVSPSCSTSRERPFQAGELILAETGEGETKFKKLFR 173
P +L+ Q H P E P + L+L TG + F LFR
Sbjct: 1072 RVGTPQLLALVQ--------HWVPGARLVEELPHEL-VLVLPYTGAHDGSFATLFR 1118
>gi|38605733 nucleoporin 43kDa [Homo sapiens]
Length = 380
Score = 30.0 bits (66), Expect = 4.8
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 133 EVEERHVSPSCSTSRERPFQAGELILAET-----GEGETKFKKLFRLNNFGLLNSNWG 185
E+ + VS S +R RP G L AET + E + L+ + +FG L+S+ G
Sbjct: 3 EIYAKFVSQKISKTRWRPLPPGSLQTAETFATGSWDNEENYISLWSIGDFGNLDSDGG 60
>gi|7662146 DnaJ (Hsp40) homolog, subfamily C, member 6 [Homo
sapiens]
Length = 913
Score = 29.6 bits (65), Expect = 6.3
Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 4/131 (3%)
Query: 27 LGQEPFEGARSLCCRSSPRDLRDGEREHEAAQRKAPGAESCPSLPLSISDIGTGCL--SS 84
+ QE + L SSP +G++ H +K + P+ P D+ L S+
Sbjct: 449 VNQESEQSDDELLTLSSPHGNANGDKPHGV--KKPSKKQQEPAAPPPPEDVDLLGLEGSA 506
Query: 85 LENLRLPTLREESSPRELEDSSGDQGRCGPTHQGSEDPSMLSQAQSATEVEERHVSPSCS 144
+ N P ++ L D G G GPT G + + + S
Sbjct: 507 MSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQSGVEDVFHPSGPASTQSTPRRSATS 566
Query: 145 TSRERPFQAGE 155
TS + GE
Sbjct: 567 TSASPTLRVGE 577
>gi|7657198 dimethyladenosine transferase [Homo sapiens]
Length = 313
Score = 29.6 bits (65), Expect = 6.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 232 PKDINMILSMMDINPGDTVLEAGSGSGGMSLFL 264
P IN I+ + P D VLE G G+G M++ L
Sbjct: 42 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKL 74
>gi|156104862 ankyrin repeat domain 38 [Homo sapiens]
Length = 995
Score = 29.6 bits (65), Expect = 6.3
Identities = 16/64 (25%), Positives = 26/64 (40%)
Query: 92 TLREESSPRELEDSSGDQGRCGPTHQGSEDPSMLSQAQSATEVEERHVSPSCSTSRERPF 151
T E+S+P +L DS ++ GP H+ +D + +A H + E P
Sbjct: 680 TSGEDSTPEDLSDSEAEKKCDGPDHKHVKDAHLTCEAGQGIPEGTCHAAQESGPGEEVPH 739
Query: 152 QAGE 155
E
Sbjct: 740 SKAE 743
>gi|239749583 PREDICTED: similar to hCG1794531 [Homo sapiens]
Length = 277
Score = 29.3 bits (64), Expect = 8.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 60 KAPGAESCPSLPLSISDIGTGCLSSLENLRLPTLREESSP 99
+ PG + C + LSI GT C+ +++ L L R+ S P
Sbjct: 161 RGPGVDYCGNRGLSIQGHGTQCMGTVQPLVLKQPRDPSLP 200
>gi|239743799 PREDICTED: similar to hCG1794531 [Homo sapiens]
Length = 295
Score = 29.3 bits (64), Expect = 8.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 60 KAPGAESCPSLPLSISDIGTGCLSSLENLRLPTLREESSP 99
+ PG + C + LSI GT C+ +++ L L R+ S P
Sbjct: 161 RGPGVDYCGNRGLSIQGHGTQCMGTVQPLVLKQPRDPSLP 200
>gi|239743758 PREDICTED: similar to hCG1794531 [Homo sapiens]
Length = 295
Score = 29.3 bits (64), Expect = 8.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 60 KAPGAESCPSLPLSISDIGTGCLSSLENLRLPTLREESSP 99
+ PG + C + LSI GT C+ +++ L L R+ S P
Sbjct: 161 RGPGVDYCGNRGLSIQGHGTQCMGTVQPLVLKQPRDPSLP 200
>gi|226530908 protein-L-isoaspartate (D-aspartate)
O-methyltransferase 1 [Homo sapiens]
Length = 285
Score = 29.3 bits (64), Expect = 8.2
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 244 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYK 292
++ G L+ GSGSG ++ ++ VG G+VI + K+ D + N +
Sbjct: 134 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVR 182
>gi|170932473 zinc finger protein 786 [Homo sapiens]
Length = 782
Score = 29.3 bits (64), Expect = 8.2
Identities = 36/143 (25%), Positives = 54/143 (37%), Gaps = 21/143 (14%)
Query: 12 LCLRQGLGTNSFLHGLGQEPFEGARSLCC--RSSPRDLRDGEREHEAAQRKAPGAESCPS 69
+C R L S H L Q+ + A+ C RS P D R + + A E
Sbjct: 275 MCFRHELTHPS--HRLPQQGEKPAQCTPCGKRSLPVDSTQARRCQHSREGPASWRE---- 328
Query: 70 LPLSISDIGTGCLSSLENLRLPTLREESSPRELEDSSGDQGRCGPTHQGSEDPSMLSQAQ 129
G G SS+ + + P R E +S +G G+E P S+
Sbjct: 329 --------GRGASSSVHSGQKPGSRLPQ-----EGNSHQEGDTEALQHGAEGPCSCSECG 375
Query: 130 SATEVEERHVSPSCSTSRERPFQ 152
+ + R SP + + E+PFQ
Sbjct: 376 ERSPMSARLASPCRAHTGEKPFQ 398
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,456,604
Number of Sequences: 37866
Number of extensions: 907812
Number of successful extensions: 2510
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 2490
Number of HSP's gapped (non-prelim): 44
length of query: 477
length of database: 18,247,518
effective HSP length: 106
effective length of query: 371
effective length of database: 14,233,722
effective search space: 5280710862
effective search space used: 5280710862
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.