Guide to the Human Genome
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Name: ARRDC4 Sequence: fasta or formatted (418aa) NCBI GI: 190886442
Description:

arrestin domain containing 4

Referenced in:

Glutathione Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         35           3
 C cysteine            3.1         13           2
 D aspartate           2.4         10           1
 E glutamate           7.9         33           3
 F phenylalanine       3.8         16           2
 G glycine             6.9         29           2
 H histidine           1.9          8           1
 I isoleucine          5.5         23           2
 K lysine              4.1         17           2
 L leucine             8.4         35           2
 M methionine          1.4          6           1
 N asparagine          2.6         11           1
 P proline             9.1         38           3
 Q glutamine           3.6         15           1
 R arginine            4.8         20           1
 S serine              8.6         36           2
 T threonine           5.0         21           1
 V valine              8.4         35           2
 W tryptophan          1.0          4           1
 Y tyrosine            3.1         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   arrestin domain containing 4 
ARRDC3                0.475   arrestin domain containing 3 
ARRDC2                0.392   arrestin domain containing 2 isoform 1 
ARRDC2                0.382   arrestin domain containing 2 isoform 2 
TXNIP                 0.377   thioredoxin interacting protein 
ARRDC1                0.090   arrestin domain containing 1 
ARRDC5                0.042   arrestin domain containing 5 
BRD4                  0.008   bromodomain-containing protein 4 isoform long 
PRRT1                 0.008   NG5 protein 
GAS2L2                0.008   growth arrest-specific 2 like 2 
ARRB1                 0.007   arrestin beta 1 isoform A 
ARRB1                 0.007   arrestin beta 1 isoform B 
TRMT61B               0.007   tRNA methyltransferase 61 homolog B 
MLL2                  0.007   myeloid/lymphoid or mixed-lineage leukemia 2 
NFATC4                0.006   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC4                0.006   nuclear factor of activated T-cells, cytoplasmic, ca...
AMOTL1                0.006   angiomotin like 1 
CECR6                 0.006   cat eye syndrome chromosome region, candidate 6 iso...
CECR6                 0.006   cat eye syndrome chromosome region, candidate 6 isof...
MYF6                  0.006   myogenic factor 6 
SAG                   0.006   S-arrestin 
CDX1                  0.005   caudal type homeobox 1 
ARR3                  0.005   arrestin 3, retinal (X-arrestin) 
CHAF1B                0.005   chromatin assembly factor 1 subunit B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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