Guide to the Human Genome
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Name: TRMT61B Sequence: fasta or formatted (477aa) NCBI GI: 222831587
Description:

tRNA methyltransferase 61 homolog B

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         25           2
 C cysteine            2.5         12           2
 D aspartate           5.5         26           2
 E glutamate           7.5         36           2
 F phenylalanine       4.0         19           1
 G glycine             8.4         40           2
 H histidine           3.4         16           2
 I isoleucine          4.4         21           1
 K lysine              5.9         28           2
 L leucine            10.7         51           2
 M methionine          2.1         10           2
 N asparagine          3.1         15           2
 P proline             5.5         26           1
 Q glutamine           4.0         19           1
 R arginine            5.7         27           2
 S serine              9.0         43           2
 T threonine           3.8         18           1
 V valine              6.5         31           2
 W tryptophan          1.5          7           1
 Y tyrosine            1.5          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tRNA methyltransferase 61 homolog B 
TRMT61A               0.023   tRNA(m1A58)-methyltransferase subunit TRM61 
C1orf173              0.007   hypothetical protein LOC127254 
AP3B2                 0.007   adaptor-related protein complex 3, beta 2 subunit [H...
ZNF185                0.006   zinc finger protein 185 
PPP1R1B               0.006   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R1B               0.006   protein phosphatase 1, regulatory (inhibitor) subuni...
PHACTR2               0.006   phosphatase and actin regulator 2 isoform 4 
PHACTR2               0.006   phosphatase and actin regulator 2 isoform 2 
ARRDC4                0.006   arrestin domain containing 4 
SORBS2                0.005   sorbin and SH3 domain containing 2 isoform 7 
PRF1                  0.005   perforin 1 precursor 
PRF1                  0.005   perforin 1 precursor 
NUP214                0.005   nucleoporin 214kDa 
SORBS2                0.005   sorbin and SH3 domain containing 2 isoform 2 
GALNT13               0.005   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
ATAD2                 0.005   ATPase family, AAA domain containing 2 
LOC100130174          0.005   PREDICTED: hypothetical protein 
LOC100130174          0.005   PREDICTED: hypothetical protein 
LOC100130174          0.005   PREDICTED: hypothetical protein 
ABCA7                 0.005   ATP-binding cassette, sub-family A, member 7 
NUP43                 0.005   nucleoporin 43kDa 
DNAJC6                0.005   DnaJ (Hsp40) homolog, subfamily C, member 6 
DIMT1L                0.005   dimethyladenosine transferase 
KANK4                 0.005   ankyrin repeat domain 38 
LOC644587             0.004   PREDICTED: similar to hCG1794531 
LOC100132939          0.004   PREDICTED: similar to hCG1794531 
LOC644587             0.004   PREDICTED: similar to hCG1794531 
PCMT1                 0.004   protein-L-isoaspartate (D-aspartate) O-methyltransf...
ZNF786                0.004   zinc finger protein 786 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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