Guide to the Human Genome
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Name: PCMT1 Sequence: fasta or formatted (285aa) NCBI GI: 226530908
Description:

protein-L-isoaspartate (D-aspartate) O-methyltransferase 1

Referenced in:

Additional Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         25           3
 C cysteine            1.4          4           1
 D aspartate           6.3         18           2
 E glutamate           3.5         10           2
 F phenylalanine       1.4          4           1
 G glycine            11.9         34           2
 H histidine           2.8          8           1
 I isoleucine          4.9         14           2
 K lysine              6.3         18           1
 L leucine            10.5         30           2
 M methionine          3.5         10           1
 N asparagine          2.5          7           2
 P proline             4.6         13           1
 Q glutamine           3.5         10           1
 R arginine            3.5         10           1
 S serine              7.7         22           2
 T threonine           3.2          9           1
 V valine              9.1         26           2
 W tryptophan          1.4          4           1
 Y tyrosine            3.2          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein-L-isoaspartate (D-aspartate) O-methyltransf... 
PCMTD1                0.064   protein-L-isoaspartate (D-aspartate) O-methyltransf...
PCMTD2                0.055   protein-L-isoaspartate (D-aspartate) O-methyltransf...
PCMTD2                0.049   protein-L-isoaspartate (D-aspartate) O-methyltransf...
TAF15                 0.013   TBP-associated factor 15 isoform 2 
TAF15                 0.013   TBP-associated factor 15 isoform 1 
AS3MT                 0.011   arsenic (+3 oxidation state) methyltransferase [Hom...
SLC4A5                0.011   sodium bicarbonate transporter 4 isoform a 
SLC4A5                0.011   sodium bicarbonate transporter 4 isoform c 
COQ3                  0.011   hexaprenyldihydroxybenzoate methyltransferase [Homo...
RFX1                  0.009   regulatory factor X1 
LOC100293833          0.009   PREDICTED: hypothetical protein 
LOC100290377          0.009   PREDICTED: hypothetical protein XP_002347744 
LOC100288761          0.009   PREDICTED: hypothetical protein XP_002343542 
TRMT2A                0.009   HpaII tiny fragments locus 9C 
TRMT2A                0.009   HpaII tiny fragments locus 9C 
FAM174B               0.009   hypothetical protein LOC400451 
CKAP4                 0.007   cytoskeleton-associated protein 4 
TRMT61B               0.007   tRNA methyltransferase 61 homolog B 
BMP2K                 0.007   BMP-2 inducible kinase isoform a 
BMP2K                 0.007   BMP-2 inducible kinase isoform b 
GSPT1                 0.007   G1 to S phase transition 1 isoform 2 
GSPT1                 0.007   G1 to S phase transition 1 isoform 1 
PRMT3                 0.007   protein arginine methyltransferase 3 isoform 3 [Hom...
PRMT3                 0.007   protein arginine methyltransferase 3 isoform 2 [Hom...
PRMT3                 0.007   protein arginine methyltransferase 3 isoform 1 [Homo...
KRT10                 0.007   keratin 10 
EN2                   0.007   engrailed homeobox 2 
FRMPD2                0.007   FERM and PDZ domain containing 2 isoform 1 
CDC42EP4              0.007   Cdc42 effector protein 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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