Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: AP3B2 Sequence: fasta or formatted (1082aa) NCBI GI: 34482047
Description:

adaptor-related protein complex 3, beta 2 subunit

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         92           5
 C cysteine            1.0         11           1
 D aspartate           5.5         59           2
 E glutamate           8.5         92           3
 F phenylalanine       2.6         28           1
 G glycine             5.1         55           2
 H histidine           1.8         19           1
 I isoleucine          4.9         53           2
 K lysine              6.7         72           3
 L leucine             9.9        107           3
 M methionine          2.5         27           2
 N asparagine          3.0         32           1
 P proline             5.6         61           2
 Q glutamine           4.3         46           2
 R arginine            4.9         53           2
 S serine             10.2        110           6
 T threonine           5.2         56           2
 V valine              7.1         77           3
 W tryptophan          0.5          5           1
 Y tyrosine            2.5         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adaptor-related protein complex 3, beta 2 subunit [H... 
AP3B1                 0.602   adaptor-related protein complex 3, beta 1 subunit [H...
AP2B1                 0.123   adaptor-related protein complex 2, beta 1 subunit is...
AP2B1                 0.123   adaptor-related protein complex 2, beta 1 subunit iso...
AP1B1                 0.122   adaptor-related protein complex 1 beta 1 subunit iso...
AP1B1                 0.122   adaptor-related protein complex 1 beta 1 subunit iso...
AP4B1                 0.074   adaptor-related protein complex 4, beta 1 subunit [...
SETD1A                0.022   SET domain containing 1A 
DSPP                  0.022   dentin sialophosphoprotein preproprotein 
COPB1                 0.021   coatomer protein complex, subunit beta 1 
COPB1                 0.021   coatomer protein complex, subunit beta 1 
COPB1                 0.021   coatomer protein complex, subunit beta 1 
SETD1B                0.021   SET domain containing 1B 
CDC2L2                0.020   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.020   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.020   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.019   cell division cycle 2-like 1 (PITSLRE proteins) isof...
TNRC18                0.019   trinucleotide repeat containing 18 
RPGR                  0.017   retinitis pigmentosa GTPase regulator isoform C [Hom...
UBTF                  0.017   upstream binding transcription factor, RNA polymera...
UBTF                  0.017   upstream binding transcription factor, RNA polymera...
UBTF                  0.017   upstream binding transcription factor, RNA polymerase...
IWS1                  0.017   IWS1 homolog 
SLC24A1               0.016   solute carrier family 24 (sodium/potassium/calcium ex...
DMP1                  0.016   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.016   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press