Guide to the Human Genome
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Name: PPP1R1B Sequence: fasta or formatted (168aa) NCBI GI: 31415880
Description:

protein phosphatase 1, regulatory (inhibitor) subunit 1B isoform 2

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [204aa] protein phosphatase 1, regulatory (inhibitor) subunit 1B isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4          9           1
 C cysteine            1.2          2           1
 D aspartate           5.4          9           2
 E glutamate          22.6         38           7
 F phenylalanine       0.6          1           1
 G glycine             7.1         12           2
 H histidine           3.0          5           2
 I isoleucine          1.8          3           1
 K lysine              3.0          5           1
 L leucine             7.7         13           1
 M methionine          0.6          1           1
 N asparagine          2.4          4           1
 P proline            10.1         17           3
 Q glutamine           6.0         10           1
 R arginine            6.0         10           1
 S serine             10.7         18           2
 T threonine           2.4          4           2
 V valine              2.4          4           1
 W tryptophan          0.6          1           1
 Y tyrosine            1.2          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1, regulatory (inhibitor) subuni... 
PPP1R1B               1.000   protein phosphatase 1, regulatory (inhibitor) subuni...
MYT1                  0.081   myelin transcription factor 1 
TTBK1                 0.075   tau tubulin kinase 1 
PELP1                 0.075   proline, glutamic acid and leucine rich protein 1 [...
MYST4                 0.075   MYST histone acetyltransferase (monocytic leukemia)...
SHROOM4               0.072   shroom family member 4 
HRC                   0.069   histidine rich calcium binding protein precursor [Hom...
CNGB1                 0.069   cyclic nucleotide gated channel beta 1 isoform a [H...
RANGAP1               0.069   Ran GTPase activating protein 1 
DCAF8L2               0.066   DDB1 and CUL4 associated factor 8-like 2 
CDC2L1                0.066   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.066   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.066   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.066   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.066   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.066   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CENPB                 0.062   centromere protein B 
CDC2L2                0.062   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.062   cell division cycle 2-like 2 isoform 1 
RGAG4                 0.062   retrotransposon gag domain containing 4 
ATRX                  0.062   transcriptional regulator ATRX isoform 2 
ATRX                  0.062   transcriptional regulator ATRX isoform 1 
UBTF                  0.062   upstream binding transcription factor, RNA polymera...
UBTF                  0.062   upstream binding transcription factor, RNA polymera...
UBTF                  0.062   upstream binding transcription factor, RNA polymerase...
EHMT2                 0.059   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.059   euchromatic histone-lysine N-methyltransferase 2 is...
TRIM44                0.059   DIPB protein 
RPGR                  0.059   retinitis pigmentosa GTPase regulator isoform C [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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