Guide to the Human Genome
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Name: SORBS2 Sequence: fasta or formatted (1004aa) NCBI GI: 224586853
Description:

sorbin and SH3 domain containing 2 isoform 7

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [1100aa] sorbin and SH3 domain containing 2 isoform 2
alt prot [666aa] sorbin and SH3 domain containing 2 isoform 1
alt prot [644aa] sorbin and SH3 domain containing 2 isoform 3
alt prot [731aa] sorbin and SH3 domain containing 2 isoform 4
alt prot [661aa] sorbin and SH3 domain containing 2 isoform 5
alt prot [824aa] sorbin and SH3 domain containing 2 isoform 6
alt prot [492aa] sorbin and SH3 domain containing 2 isoform 8
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         48           2
 C cysteine            2.0         20           1
 D aspartate           6.5         65           2
 E glutamate           6.6         66           3
 F phenylalanine       3.3         33           2
 G glycine             5.1         51           3
 H histidine           4.1         41          11
 I isoleucine          3.7         37           1
 K lysine              6.8         68           2
 L leucine             6.4         64           2
 M methionine          1.9         19           1
 N asparagine          3.4         34           1
 P proline             9.4         94           4
 Q glutamine           3.7         37           2
 R arginine            8.0         80           2
 S serine             12.3        123           3
 T threonine           4.1         41           2
 V valine              4.4         44           2
 W tryptophan          0.9          9           1
 Y tyrosine            3.0         30           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sorbin and SH3 domain containing 2 isoform 7 
SORBS2                0.988   sorbin and SH3 domain containing 2 isoform 2 
SORBS2                0.258   sorbin and SH3 domain containing 2 isoform 5 
SORBS2                0.258   sorbin and SH3 domain containing 2 isoform 8 
SORBS2                0.258   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.258   sorbin and SH3 domain containing 2 isoform 4 
SORBS2                0.258   sorbin and SH3 domain containing 2 isoform 3 
SORBS2                0.258   sorbin and SH3 domain containing 2 isoform 1 
SORBS1                0.132   sorbin and SH3 domain containing 1 isoform 2 
SORBS1                0.132   sorbin and SH3 domain containing 1 isoform 1 
SORBS1                0.129   sorbin and SH3 domain containing 1 isoform 7 
SORBS1                0.129   sorbin and SH3 domain containing 1 isoform 6 
SORBS1                0.125   sorbin and SH3 domain containing 1 isoform 5 
SORBS3                0.100   sorbin and SH3 domain containing 3 isoform 1 
SORBS3                0.099   sorbin and SH3 domain containing 3 isoform 2 
SORBS1                0.086   sorbin and SH3 domain containing 1 isoform 4 
SORBS1                0.085   sorbin and SH3 domain containing 1 isoform 3 
SH3D19                0.037   SH3 domain containing 19 isoform c 
SH3D19                0.037   SH3 domain containing 19 isoform b 
SH3D19                0.037   SH3 domain containing 19 isoform a 
SH3RF1                0.033   SH3 domain containing ring finger 1 
SH3RF3                0.032   SH3 domain containing ring finger 3 
C1orf113              0.031   SH3 domain-containing protein C1orf113 isoform 1 [H...
ITSN1                 0.030   intersectin 1 isoform ITSN-s 
ITSN1                 0.030   intersectin 1 isoform ITSN-l 
CD2AP                 0.028   CD2-associated protein 
SH3KBP1               0.028   SH3-domain kinase binding protein 1 isoform a 
SH3RF2                0.028   SH3 domain containing ring finger 2 
ITSN2                 0.027   intersectin 2 isoform 3 
ITSN2                 0.027   intersectin 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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