Guide to the Human Genome
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Name: PPP1R1B Sequence: fasta or formatted (204aa) NCBI GI: 21735492
Description:

protein phosphatase 1, regulatory (inhibitor) subunit 1B isoform 1

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [168aa] protein phosphatase 1, regulatory (inhibitor) subunit 1B isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         11           1
 C cysteine            1.0          2           1
 D aspartate           5.9         12           2
 E glutamate          19.1         39           7
 F phenylalanine       1.0          2           1
 G glycine             5.9         12           2
 H histidine           2.5          5           2
 I isoleucine          2.5          5           1
 K lysine              3.9          8           2
 L leucine             6.9         14           1
 M methionine          1.5          3           1
 N asparagine          2.0          4           1
 P proline            11.8         24           3
 Q glutamine           6.4         13           1
 R arginine            7.8         16           4
 S serine              9.8         20           2
 T threonine           2.5          5           2
 V valine              2.9          6           1
 W tryptophan          0.5          1           1
 Y tyrosine            1.0          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1, regulatory (inhibitor) subuni... 
PPP1R1B               0.814   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R1C               0.132   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R1A               0.097   protein phosphatase 1, regulatory (inhibitor) subun...
MYT1                  0.066   myelin transcription factor 1 
TTBK1                 0.061   tau tubulin kinase 1 
PELP1                 0.061   proline, glutamic acid and leucine rich protein 1 [...
MYST4                 0.061   MYST histone acetyltransferase (monocytic leukemia)...
SHROOM4               0.059   shroom family member 4 
HRC                   0.056   histidine rich calcium binding protein precursor [Hom...
CNGB1                 0.056   cyclic nucleotide gated channel beta 1 isoform a [H...
RANGAP1               0.056   Ran GTPase activating protein 1 
DCAF8L2               0.053   DDB1 and CUL4 associated factor 8-like 2 
CDC2L1                0.053   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.053   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.053   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.053   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.053   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.053   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CENPB                 0.051   centromere protein B 
CDC2L2                0.051   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.051   cell division cycle 2-like 2 isoform 1 
RGAG4                 0.051   retrotransposon gag domain containing 4 
ATRX                  0.051   transcriptional regulator ATRX isoform 2 
ATRX                  0.051   transcriptional regulator ATRX isoform 1 
UBTF                  0.051   upstream binding transcription factor, RNA polymera...
UBTF                  0.051   upstream binding transcription factor, RNA polymera...
UBTF                  0.051   upstream binding transcription factor, RNA polymerase...
EHMT2                 0.048   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.048   euchromatic histone-lysine N-methyltransferase 2 is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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