PRF1 27367

Name: PRF1	Sequence: fasta or formatted (555aa)		NCBI GI: 40254808
Description: perforin 1 precursor		Referenced in: Complement T cells
Other entries for this name: alt mRNA [555aa] perforin 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 46 2 C cysteine 3.6 20 2 D aspartate 5.8 32 3 E glutamate 4.3 24 2 F phenylalanine 3.2 18 2 G glycine 7.9 44 3 H histidine 4.5 25 2 I isoleucine 2.2 12 1 K lysine 3.1 17 4 L leucine 11.2 62 5 M methionine 0.5 3 1 N asparagine 3.1 17 3 P proline 5.9 33 2 Q glutamine 4.9 27 1 R arginine 7.6 42 2 S serine 6.8 38 2 T threonine 6.5 36 2 V valine 6.5 36 2 W tryptophan 2.2 12 1 Y tyrosine 2.0 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 perforin 1 precursor PRF1 1.000 perforin 1 precursor C6 0.055 complement component 6 precursor C6 0.055 complement component 6 precursor C8A 0.037 complement component 8, alpha polypeptide precursor [... C7 0.033 complement component 7 precursor MCTP1 0.019 multiple C2 domains, transmembrane 1 isoform S [Homo... MCTP1 0.019 multiple C2 domains, transmembrane 1 isoform L [Hom... RASAL1 0.018 RAS protein activator like 1 C9 0.015 complement component 9 precursor MCTP2 0.015 multiple C2 domains, transmembrane 2 isoform 2 [Hom... MCTP2 0.015 multiple C2 domains, transmembrane 2 isoform 1 [Hom... ESYT3 0.014 family with sequence similarity 62 (C2 domain conta... PLA2G4D 0.013 phospholipase A2, group IVD UNC13C 0.013 unc-13 homolog C UNC13A 0.013 unc-13 homolog A C8B 0.012 complement component 8, beta polypeptide preproprotei... UNC13B 0.011 UNC13 (C. elegans)-like OTOF 0.011 otoferlin isoform a ESYT1 0.011 extended synaptotagmin-like protein 1 FER1L6 0.010 fer-1-like 6 ITCH 0.008 itchy homolog E3 ubiquitin protein ligase MCTP2 0.007 multiple C2 domains, transmembrane 2 isoform 3 [Hom... BAI1 0.007 brain-specific angiogenesis inhibitor 1 precursor [... MYOF 0.007 myoferlin isoform b MYOF 0.007 myoferlin isoform a DBC1 0.006 deleted in bladder cancer 1 RPH3A 0.006 rabphilin 3A homolog isoform 1 RPH3A 0.006 rabphilin 3A homolog isoform 2 SSPO 0.006 SCO-spondin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.