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Search of human proteins with 22219477
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22219477 tigger transposable element derived 4 [Homo
sapiens]
(512 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22219477 tigger transposable element derived 4 [Homo sapiens] 1029 0.0
gi|13569924 hypothetical protein LOC81789 [Homo sapiens] 287 2e-77
gi|21735415 centromere protein B [Homo sapiens] 184 2e-46
gi|23312394 tigger transposable element derived 3 [Homo sapiens] 176 5e-44
gi|22547224 jerky homolog-like [Homo sapiens] 173 3e-43
gi|23312392 tigger transposable element derived 2 [Homo sapiens] 164 2e-40
gi|22325392 tigger transposable element derived 7 [Homo sapiens] 158 1e-38
gi|117938293 jerky isoform a [Homo sapiens] 139 6e-33
gi|117938295 jerky isoform b [Homo sapiens] 139 6e-33
gi|22209001 hypothetical protein LOC200765 [Homo sapiens] 137 2e-32
gi|144922631 tigger transposable element derived 5 [Homo sapiens] 103 3e-22
gi|239755627 PREDICTED: similar to cag [Homo sapiens] 71 2e-12
gi|239750125 PREDICTED: hypothetical protein XP_002347296 [Homo ... 71 2e-12
gi|239744433 PREDICTED: hypothetical protein XP_002343159 [Homo ... 71 2e-12
gi|22027480 pogo transposable element with KRAB domain [Homo sap... 65 1e-10
gi|49619234 hypothetical protein LOC92806 [Homo sapiens] 54 3e-07
gi|8922952 cappuccino [Homo sapiens] 35 0.21
gi|122937333 zinc finger protein 697 [Homo sapiens] 34 0.28
gi|119874201 furry-like [Homo sapiens] 33 0.47
gi|197100900 iroquois homeobox 2 [Homo sapiens] 33 0.81
gi|39930475 iroquois homeobox 2 [Homo sapiens] 33 0.81
gi|61102725 la related protein isoform 2 [Homo sapiens] 33 0.81
gi|39725634 la related protein isoform 1 [Homo sapiens] 33 0.81
gi|7657013 apoptosis antagonizing transcription factor [Homo sap... 32 1.1
gi|90652851 zinc finger transcription factor TRPS1 [Homo sapiens] 32 1.8
gi|153945734 teashirt zinc finger homeobox 2 [Homo sapiens] 32 1.8
gi|226497734 RNA binding motif protein 19 [Homo sapiens] 31 3.1
gi|226497654 RNA binding motif protein 19 [Homo sapiens] 31 3.1
gi|226497574 RNA binding motif protein 19 [Homo sapiens] 31 3.1
gi|148727331 ubiquitin specific peptidase 5 isoform 1 [Homo sapi... 31 3.1
>gi|22219477 tigger transposable element derived 4 [Homo sapiens]
Length = 512
Score = 1029 bits (2660), Expect = 0.0
Identities = 512/512 (100%), Positives = 512/512 (100%)
Query: 1 MAEASVDASTLPVTVKKKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNK 60
MAEASVDASTLPVTVKKKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNK
Sbjct: 1 MAEASVDASTLPVTVKKKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNK 60
Query: 61 DKVLEAFESLRFDPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQK 120
DKVLEAFESLRFDPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQK
Sbjct: 61 DKVLEAFESLRFDPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQK 120
Query: 121 LGHNDFKCSNGWLDRFKSRYGLVFRAQPVEATGVPVDPSTVWYQNVLPYYLNDYHPKNVF 180
LGHNDFKCSNGWLDRFKSRYGLVFRAQPVEATGVPVDPSTVWYQNVLPYYLNDYHPKNVF
Sbjct: 121 LGHNDFKCSNGWLDRFKSRYGLVFRAQPVEATGVPVDPSTVWYQNVLPYYLNDYHPKNVF 180
Query: 181 NIKETGLLYRMLPTNTFAFKGETCSVGKLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPH 240
NIKETGLLYRMLPTNTFAFKGETCSVGKLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPH
Sbjct: 181 NIKETGLLYRMLPTNTFAFKGETCSVGKLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPH 240
Query: 241 CFKGLKSLPVCYEANRMAWMTSDVFEQWMRKLDEEFQAQQRRVVIFVESFPAHPEVKNLK 300
CFKGLKSLPVCYEANRMAWMTSDVFEQWMRKLDEEFQAQQRRVVIFVESFPAHPEVKNLK
Sbjct: 241 CFKGLKSLPVCYEANRMAWMTSDVFEQWMRKLDEEFQAQQRRVVIFVESFPAHPEVKNLK 300
Query: 301 SIELAFFPSCLSSKCIAMKQGVIKSLKIKYRHCLIKKFLSSVEGSKEFTFSLLDAVDTLH 360
SIELAFFPSCLSSKCIAMKQGVIKSLKIKYRHCLIKKFLSSVEGSKEFTFSLLDAVDTLH
Sbjct: 301 SIELAFFPSCLSSKCIAMKQGVIKSLKIKYRHCLIKKFLSSVEGSKEFTFSLLDAVDTLH 360
Query: 361 LCWRAVTPETIVKSYEEAGFKSQKGESDITNAEKDTGLDLVADALGAGVEFPEGLSIEEY 420
LCWRAVTPETIVKSYEEAGFKSQKGESDITNAEKDTGLDLVADALGAGVEFPEGLSIEEY
Sbjct: 361 LCWRAVTPETIVKSYEEAGFKSQKGESDITNAEKDTGLDLVADALGAGVEFPEGLSIEEY 420
Query: 421 AALDDDLETCEAAPNGDSICTKESKSDETGFYTSDEEDDDGSPGTELPLPSKSEAITALD 480
AALDDDLETCEAAPNGDSICTKESKSDETGFYTSDEEDDDGSPGTELPLPSKSEAITALD
Sbjct: 421 AALDDDLETCEAAPNGDSICTKESKSDETGFYTSDEEDDDGSPGTELPLPSKSEAITALD 480
Query: 481 TLKKFLRSQDMNDGLQNSLADLENFINSLSPK 512
TLKKFLRSQDMNDGLQNSLADLENFINSLSPK
Sbjct: 481 TLKKFLRSQDMNDGLQNSLADLENFINSLSPK 512
>gi|13569924 hypothetical protein LOC81789 [Homo sapiens]
Length = 521
Score = 287 bits (734), Expect = 2e-77
Identities = 152/501 (30%), Positives = 286/501 (57%), Gaps = 16/501 (3%)
Query: 16 KKKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLRFDPK 75
KK++ S+EEK+ ++ AV+SGK+K ++A E+GI ++LS+ +K++ K E P+
Sbjct: 7 KKRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVREASVGPQ 66
Query: 76 RKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDR 135
RKR+R+A Y D+++A+ W++ N+ V G ++R KA + A LG+++F+ S GWL+R
Sbjct: 67 RKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQASVGWLNR 126
Query: 136 FKSRYGLVFRAQPVEAT-----GVPVDPSTVWYQNVLPYYLNDYHPKNVFNIKETGLLYR 190
F+ R+G+ +A E + G+ +D W+ + + DY P ++FN ETG+ ++
Sbjct: 127 FRDRHGIALKAVCREDSDRLMNGLGIDKINEWHAGEIIKLIADYSPDDIFNADETGVFFQ 186
Query: 191 MLPTNTFAFKGETCSVGKLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPHCFKGLKSLPV 250
+LP +T A KG+ C GK K R+T + N G+EK+ L++G+ +PHC K + SLP
Sbjct: 187 LLPQHTLAAKGDHCRGGKKAKQRLTALFCCNASGTEKMRPLIVGRSASPHCLKNIHSLPC 246
Query: 251 CYEANRMAWMTSDVFEQWMRKLDEEFQAQQRRVVIFVESFPAHPEVKNLKSIELAFFPSC 310
Y AN+ AWMT D+F +W+ ++D + +RR+++ +++ AH + +L+ I++ + PS
Sbjct: 247 DYRANQWAWMTRDLFNEWLMQVDARMKRAERRILLLIDNCSAHNMLPHLERIQVGYLPSN 306
Query: 311 LSSKCIAMKQGVIKSLKIKYRHCLIKKFLSSVEGSK-EFTFSLLDAVDTLHLCWRAVTPE 369
++ + G+I ++K+ Y+ L+K+ L + S+ + + A+D + W +V P
Sbjct: 307 CTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSSEDQEEVDIKQAIDMIAAAWWSVKPS 366
Query: 370 TIVKSYEEAGFKSQK-GESDITNA--EKDTGLDLVADALGAGVEFPEGLSIEEYAALDDD 426
T+VK +++AG + E D +A E D ++ + + P ++ +++ DDD
Sbjct: 367 TVVKCWQKAGIVPMEFAECDTESAASEPDIAIEKLWHTVAIATCVPNEVNFQDFVTADDD 426
Query: 427 LETCEAAPNGDSICTKESKSDETGFYTSDEEDDDGSPGTELPLPSKSEAITALDTLKKFL 486
L + + E+ S E G S++E + P E P + +EAI+++ L++FL
Sbjct: 427 LIISQDTDIIQDMVAGENTS-EAG---SEDEGEVSLP--EQPKVTITEAISSVQKLRQFL 480
Query: 487 RS-QDMNDGLQNSLADLENFI 506
+ D+ D + L ++ ++
Sbjct: 481 STCVDIPDAIFGQLNGIDEYL 501
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 184 bits (467), Expect = 2e-46
Identities = 154/579 (26%), Positives = 248/579 (42%), Gaps = 97/579 (16%)
Query: 17 KKKSLSIEEKIDIINAVESGK--KKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLRFDP 74
K++ L+ EK II VE +K EIA + I ++LS+I+KNK +L +
Sbjct: 4 KRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVAS 63
Query: 75 K-RKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWL 133
RK + + Y LE L+ W++ + +PV G +L+ KA A++LG +DF SNGWL
Sbjct: 64 TCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASNGWL 123
Query: 134 DRFKSRYGLV----------------FRAQPVEATGVPVDPS----TVW--YQNVLPYYL 171
DRF+ R+G+V A P VP + S T W + P
Sbjct: 124 DRFRRRHGVVSCSGVARARARNAAPRTPAAPASPAAVPSEGSGGSTTGWRAREEQPPSVA 183
Query: 172 NDYHPKNVFNIKETGLLYRMLPTNTFAFKGETCSVGKLCKDRITLVVGTNMDGSEKLPLL 231
Y ++VF+ ET L Y LP G + R+++++ N DGSEKLP L
Sbjct: 184 EGYASQDVFSATETSLWYDFLPDQAAGLCGGD-GRPRQATQRLSVLLCANADGSEKLPPL 242
Query: 232 VIGKKRTPHCFKGLKSLPVCYEANRMAWMTSDVFEQWMRKLDEEFQAQQRRVVIFVESFP 291
V GK P G LP Y AN +T+ ++++ LD A+ RRV++
Sbjct: 243 VAGKSAKPRA--GQAGLPCDYTANSKGGVTTQALAKYLKALDTRMAAESRRVLLLAGRLA 300
Query: 292 AHP-EVKNLKSIELAFFPSCLSSKCIAMKQGVIKSLKIKYRHCLIKKFLSSVEGS--KEF 348
A + L+ ++LAFFP +++GV++ +K YR ++ K ++++EG
Sbjct: 301 AQSLDTSGLRHVQLAFFP---PGTVHPLERGVVQQVKGHYRQAMLLKAMAALEGQDPSGL 357
Query: 349 TFSLLDAVDTLHLCWRAVTPETIVKSYEEAGF----------------------KSQKGE 386
L +A+ + W+AV P I + EAGF + ++ E
Sbjct: 358 QLGLTEALHFVAAAWQAVEPSDIAACFREAGFGGGPNATITTSLKSEGEEEEEEEEEEEE 417
Query: 387 SDITNAEKDTGLDLVADALGAGVEFPEGLSIEEYAALDDDLETCEAAPNG---------- 436
+ E++ + + G G E E +EE +D D E E +
Sbjct: 418 EEGEGEEEEEEGEEEEEEGGEGEELGEEEEVEEEGDVDSDEEEEEDEESSSEGLEAEDWA 477
Query: 437 -------------------------------DSICTKESKSDETGFYTSDEEDDDGSPGT 465
DS E + DE +++DDD G
Sbjct: 478 QGVVEAGGSFGAYGAQEEAQCPTLHFLEGGEDSDSDSEEEDDEEEDDEDEDDDDDEEDGD 537
Query: 466 ELPLPSKSEAITALDTLKKFLRSQDMNDGLQNSLADLEN 504
E+P+PS EA+ +K++L S ++D +Q+ + LE+
Sbjct: 538 EVPVPSFGEAMAYFAMVKRYLTSFPIDDRVQSHILHLEH 576
>gi|23312394 tigger transposable element derived 3 [Homo sapiens]
Length = 471
Score = 176 bits (446), Expect = 5e-44
Identities = 147/513 (28%), Positives = 243/513 (47%), Gaps = 70/513 (13%)
Query: 16 KKKKSLSIEEKIDIINAVESGK-KKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLRFDP 74
KK +LS+ EKI ++ ++ K ++E+A + + + +S I KNK+K+L + S +
Sbjct: 7 KKLHALSLAEKIQVLELLDESKMSQSEVARRFQVSQPQISRICKNKEKLLADWCSGTANR 66
Query: 75 KRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLD 134
+RKR R + Y+ ++EAL+ WY IA+ V GPML KA + A +G DF S GWL
Sbjct: 67 ERKRKRESKYSGIDEALLCWYHIARAKAWDVTGPMLLHKAKELADIMG-QDFVPSIGWLV 125
Query: 135 RFKSRYGLVFRAQPVEATGVPVDPST--VWYQNVLPYYLNDYHPKNVFNIKETGLLYRML 192
R+K R + F A+ V A P +P + Q LP L D+ P++VF E LLYR +
Sbjct: 126 RWKRRNNVGFGARHVLAPSFPPEPPPPGLTSQAQLPLSLKDFSPEDVFGCAELPLLYRAV 185
Query: 193 PTNTFAFKGETCSVGKLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPHCFKGLKS--LPV 250
P + A D++ +++ N G+EK +L+ G + P CF G++S LP
Sbjct: 186 PGSFGAC------------DQVQVLLCANSRGTEKRRVLLGGLQAAPRCFFGIRSEALPA 233
Query: 251 CYEAN-RMAWMTSDVFEQWMRKLDEEFQAQQRRVVIF-----VESFPAHPEVKNLKSIEL 304
Y + + W+ +W+ + D + Q R+V + VE P + ++K + L
Sbjct: 234 SYHPDLGIPWL------EWLAQFDRDMGQQGRQVALLLAARVVEELAGLPGLYHVKLLPL 287
Query: 305 AFFPSCLSSKCIAMKQGVIKSLKIKYRHCLIKKFLSSVEGSKEFT--------FSLLDAV 356
A SS + V+++ K YRH L+ K L++++ ++ T ++LDA+
Sbjct: 288 A-----ASSTTPPLPSSVVRAFKAHYRHRLLGK-LAAIQSERDGTSLAEAGAGITVLDAL 341
Query: 357 DTLHLCWRAVTPETIVKSYEEAGFKSQKGESDITNAEKDTGLDLVADALGAGVEFPEGLS 416
W V P+ I S+ + G K ++ K + + V P GLS
Sbjct: 342 HVASAAWAKVPPQLIFSSFIQEGLAPGKTP---PSSHKTSEMPPV----------PGGLS 388
Query: 417 IEEYAALDDDLETCEAAPNGDSICTKESKSDETGFYTSDEEDDDGSPGTELPLPSKSEAI 476
+EE++ D E +C +E T DE+ D G PLP+K++A+
Sbjct: 389 LEEFSRFVD----LEGEEPRSGVCKEE-------IGTEDEKGD--REGAFEPLPTKADAL 435
Query: 477 TALDTLKKFLRSQDMNDGLQNSLADLENFINSL 509
AL TL+++ + L D E + L
Sbjct: 436 RALGTLRRWFECNSTSPELFEKFYDCEEEVERL 468
>gi|22547224 jerky homolog-like [Homo sapiens]
Length = 524
Score = 173 bits (439), Expect = 3e-43
Identities = 129/469 (27%), Positives = 232/469 (49%), Gaps = 31/469 (6%)
Query: 16 KKKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVL---EAFESLRF 72
+K+ L+I++K+DII +E G ++A YGI + ++ I KNK+K++ + +S
Sbjct: 5 RKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDSTSL 64
Query: 73 DPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLG-HNDFKCSNG 131
KRK ++ + Y +L+ A++ W+ + P++GP+ +A F LG DF S G
Sbjct: 65 LAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDFNPSAG 124
Query: 132 WLDRFKSRYG---LVFRAQPVEATGVPVDPSTVWYQNVLPYYLNDYHPKNVFNIKETGLL 188
WL RFK R+ + R + + V+ +++ + + P+ ++N ETGL
Sbjct: 125 WLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIE--RENLQPEQIYNADETGLF 182
Query: 189 YRMLPTNTFAFKGETCSVG-KLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPHCFKGLK- 246
++ LP+ KG+ G K ++R+T++ N G KL L V+GK + P FK
Sbjct: 183 WKCLPSRISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCVVGKAKKPRSFKSTDT 242
Query: 247 -SLPVCYEANRMAWMTSDVFEQWMRKL----DEEF---QAQQRRVVIFVESFPAHPEVKN 298
+LPV Y + + AWM +F QW K+ E+ + Q + V+ +++ P HP
Sbjct: 243 LNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPTHPNENV 302
Query: 299 LKS----IELAFFPSCLSSKCIAMKQGVIKSLKIKYRHCLIKKFLSSVEGSKEF--TFSL 352
L+S I + P ++S QGVI ++K YR L++ L K F +L
Sbjct: 303 LRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNYRAGLLQNNLEEGNDLKSFWKKLTL 362
Query: 353 LDAVDTLHLCWRAVTPETIVKSYEEAGFKSQKGESDITNAEKDTGLDLVADAL--GAGVE 410
LDA+ + + W V P TI +++++ ++ ES + E D + VA L G+E
Sbjct: 363 LDALYEIAMAWNLVKPVTISRAWKKILPMVEEKESLDFDVE-DISVATVAAILQHTKGLE 421
Query: 411 FPEGLSIEEYAALDDDLETCEAAPNGDSICTKESKSDETGFYTSDEEDD 459
++E++ +D E + + I + ++DE+ + +EE++
Sbjct: 422 NVTTENLEKWLEVDSTEPGYEVLTDSEIIRRAQGQADES---SENEEEE 467
>gi|23312392 tigger transposable element derived 2 [Homo sapiens]
Length = 525
Score = 164 bits (415), Expect = 2e-40
Identities = 132/505 (26%), Positives = 242/505 (47%), Gaps = 43/505 (8%)
Query: 16 KKKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLRFDP- 74
+K+ L+I++K+DII +E G +++ YGI ++++ I KNK++++ S DP
Sbjct: 5 RKRVVLTIKDKLDIIKKLEEGISFKKLSVVYGIGESTVRDIKKNKERIINYANS--SDPT 62
Query: 75 ----KRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLG-HNDFKCS 129
KRK ++++ Y +L+ ++ W+ + +PV+G + +A F LG DF S
Sbjct: 63 SGVSKRKSMKSSTYEELDRVMIEWFNQQKTDGIPVSGTICAKQAKFFFDALGMEGDFNAS 122
Query: 130 NGWLDRFKSRYGLVFRAQPVEATGVPVDPSTV-----WYQNVLPYYLNDYHPKNVFNIKE 184
+GWL RFK R+G+ A + T + D + +Q + + P+ ++ +
Sbjct: 123 SGWLTRFKQRHGIPKAAG--KGTKLKGDETAAREFCGSFQEFVE--KENLQPEQIYGADQ 178
Query: 185 TGLLYRMLPTNTFAFKGETCSVG-KLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPHCFK 243
TGL ++ LP+ T + + + G + ++RI ++ N G KL L V+GK + P FK
Sbjct: 179 TGLFWKCLPSRTLTLETDQSTSGCRSSRERIIIMCCANATGLHKLNLCVVGKAKKPRAFK 238
Query: 244 G--LKSLPVCYEANRMAWMTSDVFEQWMRK-----LDEEFQAQ--QRRVVIFVESFPAHP 294
G L +LPV Y + + AW+ VF QW K + + +++ + V+ ++ PA P
Sbjct: 239 GTDLSNLPVTYYSQKGAWIEQSVFRQWFEKYFVPQVQKHLKSKGLLEKAVLLLDFPPARP 298
Query: 295 EVKNLKS----IELAFFPSCLSSKCIAMKQGVIKSLKIKYRHCLIKKFLSSVEGSKEF-- 348
+ L S I + + P ++S M QGV+ ++K YR L++K++ K F
Sbjct: 299 NEEMLSSDDGRIIVKYLPPNVTSLIQPMSQGVLATVKRYYRAGLLQKYMDEGNDPKIFWK 358
Query: 349 TFSLLDAVDTLHLCWRAVTPETIVKSYEEAGFKSQKGESDITNAEKDTGLDLVADALGAG 408
++LDA+ + W V TI K+++ K G + + D G L A+ L
Sbjct: 359 NLTVLDAIYEVSRAWNMVKSSTITKAWK----KLFPGNEENSGMNIDEGAILAAN-LATV 413
Query: 409 VEFPEGLSIEEYAALDDDLETCEAAPNGDSICTKESKSDETGFYTSDEEDDDGSPGTELP 468
++ E + +D ++ + + + ES D+T ++++ S TEL
Sbjct: 414 LQNTEECEHVDIENIDQWFDSRSSDSSCQVLTDSESAEDQT--KAAEQKPSSKSRKTELN 471
Query: 469 LP---SKSEAITALDTLKKFLRSQD 490
S A+ + L +L QD
Sbjct: 472 PEKHISHKAALEWTENLLDYLEQQD 496
>gi|22325392 tigger transposable element derived 7 [Homo sapiens]
Length = 549
Score = 158 bits (399), Expect = 1e-38
Identities = 116/402 (28%), Positives = 195/402 (48%), Gaps = 35/402 (8%)
Query: 17 KKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNK----DKVLEAFESLRF 72
K +L++EEK+ +++ +E+G+ + E+GI K++ I KNK D VL+ L
Sbjct: 6 KYTTLNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQDMPLVG 65
Query: 73 DPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGW 132
KRKR A Y D+++A+ WY+ + VPV G L+ A FA+ G DFK S GW
Sbjct: 66 AEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERFARCFGRTDFKASTGW 125
Query: 133 LDRFKSRYGLVFRAQPVEATGVPVDPSTVWYQNVLPYYLNDYH--PKNVFNIKETGLLYR 190
L RF++R+ + R E V + ++ L + + +++ ET L ++
Sbjct: 126 LFRFRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLSMIIKEEKLCLAQLYSGDETDLFWK 185
Query: 191 MLPTNTFAFKGETCSVG-KLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPHCFK-GLKSL 248
+P N+ A + + C G K+ K+R++ + N DG+ KL ++IGK + P K +L
Sbjct: 186 SMPENSQASRKDICLPGKKINKERLSAFLCANADGTHKLKSIIIGKSKLPKSVKEDTSTL 245
Query: 249 PVCYEANRMAWMTSDVFEQWMRK--LDE---------EFQAQQRRVVIFVESFPAHPEVK 297
PV Y+ ++ W T ++F +W + + E F + R ++ ++S PAHP +
Sbjct: 246 PVIYKPSKDVWFTRELFSEWFFQNFVPEVRHFQLNVLRFHDEDVRALLLLDSCPAHPSSE 305
Query: 298 NLKS----IELAFFPSCLSSKCIAMKQGVIKSLKIKYRHCLIKKFLSSVEG--------- 344
+L S I+ FFP S+ M QGVI S K YR +++ L E
Sbjct: 306 SLTSEDGRIKCMFFPHNTSTLIQPMNQGVILSCKRLYRWKQLEESLVIFEESDDEQEKGD 365
Query: 345 ---SKEFTFSLLDAVDTLHLCWRAVTPETIVKSYEEAGFKSQ 383
SK +++ A+ W V TI ++E +K +
Sbjct: 366 KGVSKIKIYNIKSAIFNWAKSWEEVKQITIANAWENLLYKKE 407
>gi|117938293 jerky isoform a [Homo sapiens]
Length = 568
Score = 139 bits (350), Expect = 6e-33
Identities = 106/384 (27%), Positives = 189/384 (49%), Gaps = 36/384 (9%)
Query: 16 KKKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAF---ESLRF 72
+K+ L+++EKIDI +E G+ + + EY + ++L I +K ++L F +S +
Sbjct: 15 RKRVVLTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFASSDSNKA 74
Query: 73 DPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKC--SN 130
+R+ L T L+ L W+ + VPV+GPML KA DF +++ + C S
Sbjct: 75 LEQRRTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQLTE-PCVFSG 133
Query: 131 GWLDRFKSRYG---LVFRAQPVEATGVPVDPSTVWYQNVLPYYLNDYHPKNVFNIKETGL 187
GWL RFK+R+G L ++ A + +++++ + + V+N ETGL
Sbjct: 134 GWLWRFKARHGIKKLDASSEKQSADHQAAEQFCAFFRSLAAEH--GLSAEQVYNADETGL 191
Query: 188 LYRMLPTNTFAFKGETCSVGKLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPHCFKGLKS 247
+R LP T +G K KDR+T+++ N GS +L L IGK P FKG++
Sbjct: 192 FWRCLPNPTP--EGGAVPGPKQGKDRLTVLMCANATGSHRLKPLAIGKCSGPRAFKGIQH 249
Query: 248 LPVCYEANRMAWMTSDVFEQWMR-----KLDEEFQA----QQRRVVIFVESFPAHPEVKN 298
LPV Y+A AW+ ++F W + E F+ + + V+ ++S AHP+
Sbjct: 250 LPVAYKAQGNAWVDKEIFSDWFHHIFVPSVREHFRTIGLPEDSKAVLLLDSSRAHPQEAE 309
Query: 299 LKS--IELAFFPSCLSSKCIAMKQGVIKSLKIKYRHCLIKKFLS---SVEGSKEFTFSLL 353
L S + F P+ ++S M+QG+ R ++ F++ ++G +++
Sbjct: 310 LVSSNVFTIFLPASVASLVQPMEQGI--------RRDFMRNFINPPVPLQG-PHARYNMN 360
Query: 354 DAVDTLHLCWRAVTPETIVKSYEE 377
DA+ ++ W AV +++ +
Sbjct: 361 DAIFSVACAWNAVPSHVFRRAWRK 384
>gi|117938295 jerky isoform b [Homo sapiens]
Length = 556
Score = 139 bits (350), Expect = 6e-33
Identities = 106/384 (27%), Positives = 189/384 (49%), Gaps = 36/384 (9%)
Query: 16 KKKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAF---ESLRF 72
+K+ L+++EKIDI +E G+ + + EY + ++L I +K ++L F +S +
Sbjct: 15 RKRVVLTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFASSDSNKA 74
Query: 73 DPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKC--SN 130
+R+ L T L+ L W+ + VPV+GPML KA DF +++ + C S
Sbjct: 75 LEQRRTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQLTE-PCVFSG 133
Query: 131 GWLDRFKSRYG---LVFRAQPVEATGVPVDPSTVWYQNVLPYYLNDYHPKNVFNIKETGL 187
GWL RFK+R+G L ++ A + +++++ + + V+N ETGL
Sbjct: 134 GWLWRFKARHGIKKLDASSEKQSADHQAAEQFCAFFRSLAAEH--GLSAEQVYNADETGL 191
Query: 188 LYRMLPTNTFAFKGETCSVGKLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPHCFKGLKS 247
+R LP T +G K KDR+T+++ N GS +L L IGK P FKG++
Sbjct: 192 FWRCLPNPTP--EGGAVPGPKQGKDRLTVLMCANATGSHRLKPLAIGKCSGPRAFKGIQH 249
Query: 248 LPVCYEANRMAWMTSDVFEQWMR-----KLDEEFQA----QQRRVVIFVESFPAHPEVKN 298
LPV Y+A AW+ ++F W + E F+ + + V+ ++S AHP+
Sbjct: 250 LPVAYKAQGNAWVDKEIFSDWFHHIFVPSVREHFRTIGLPEDSKAVLLLDSSRAHPQEAE 309
Query: 299 LKS--IELAFFPSCLSSKCIAMKQGVIKSLKIKYRHCLIKKFLS---SVEGSKEFTFSLL 353
L S + F P+ ++S M+QG+ R ++ F++ ++G +++
Sbjct: 310 LVSSNVFTIFLPASVASLVQPMEQGI--------RRDFMRNFINPPVPLQG-PHARYNMN 360
Query: 354 DAVDTLHLCWRAVTPETIVKSYEE 377
DA+ ++ W AV +++ +
Sbjct: 361 DAIFSVACAWNAVPSHVFRRAWRK 384
>gi|22209001 hypothetical protein LOC200765 [Homo sapiens]
Length = 591
Score = 137 bits (345), Expect = 2e-32
Identities = 122/490 (24%), Positives = 226/490 (46%), Gaps = 57/490 (11%)
Query: 16 KKKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLR-FDP 74
K + SL++ +K+++I E G KAEI G+ + ++S ++ K+K L+ +S +
Sbjct: 10 KSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMNT 69
Query: 75 KRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKA----NDFAQKLG----HNDF 126
+ R R + D+E+ L+ W N+P++ +++ KA N + G F
Sbjct: 70 RMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGVEAAEEKF 129
Query: 127 KCSNGWLDRFKSRYGLVFRAQPVEATGVPVDPSTVWYQNVLPYYLND--YHPKNVFNIKE 184
+ S GW RFK R EA V+ + Y L +++ Y + +FN+ E
Sbjct: 130 EASRGWFMRFKERSHFHNIKAQGEAASADVE-AAASYPEALAKIIDEGGYTKQQIFNVDE 188
Query: 185 TGLLYRMLPTNTFAFKGETCSVG-KLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPHCFK 243
T ++ +P+ TF + E G K KDR+TL++G N G KL ++I P K
Sbjct: 189 TAFYWKKMPSRTFIAREEKSVPGFKASKDRLTLLLGANAAGDFKLKPMLIYHSENPRALK 248
Query: 244 GL--KSLPVCYEANRMAWMTSDVFEQW----MRKLDEEFQAQQR---RVVIFVESFPAHP 294
+LPV Y+ N A MT+ +F W + E + ++++ ++++ +++ P+HP
Sbjct: 249 NYTKSTLPVLYKWNSKARMTAHLFTAWFTEYFKPTVETYCSEKKIPFKILLLIDNAPSHP 308
Query: 295 E--VKNLKSIELAFFPSCLSSKCIAMKQGVIKSLKIKYRHCLIKKFLSSVEGS------- 345
++ + I + F P+ +S M QGVI + K Y K L++++
Sbjct: 309 RALMEIYEEINVIFMPANTTSILQPMDQGVISTFKSYYLRNTFHKALAAMDSDVSDGSGQ 368
Query: 346 ---KEF--TFSLLDAV------------DTLHLCWRAVTPETIVKSYEEAGFKSQKGE-- 386
K F F++LDA+ TL W+ + P T++ YE GFK+ E
Sbjct: 369 SKLKTFWKGFTILDAIKNIRDSWEEVKLSTLTGVWKKLIP-TLIDDYE--GFKTSVEEVS 425
Query: 387 SDITNAEKDTGLDLVADALGAGVE-FPEGLSIEEYAALDDDLE---TCEAAPNGDSICTK 442
+D+ K+ L++ + + ++ + L+ EE +D + E+ P D++
Sbjct: 426 ADVVEIAKELELEVEPEDVTELLQSHDKTLTDEELFLMDAQRKWFLEMESTPGEDAVNIV 485
Query: 443 ESKSDETGFY 452
E + + +Y
Sbjct: 486 EMTTKDLEYY 495
>gi|144922631 tigger transposable element derived 5 [Homo sapiens]
Length = 593
Score = 103 bits (258), Expect = 3e-22
Identities = 130/582 (22%), Positives = 235/582 (40%), Gaps = 103/582 (17%)
Query: 18 KKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESL--RFDPK 75
+K+ SI++K+ I V+ G+++A + ++G+ +L +K++ K+ E L +
Sbjct: 4 RKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVGTQ 63
Query: 76 RKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHND--FKCSNGWL 133
RK++R A +++ A+ W+ + VP++GP+++ +A FA+++ + FK S+GW
Sbjct: 64 RKKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWF 123
Query: 134 DRFKSRYGLVFR--------AQPVEATGVPV--DPSTVWYQNVLPYYL--------NDYH 175
R++ R+G+ + P A G PV +P+ LP Y
Sbjct: 124 WRWQKRHGISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPPPPAEGGYG 183
Query: 176 PKNVFNIKETGLLYRMLPTNTFAFKGETCSVGKLCK----DRITLVVGTNMDGSEKLPLL 231
+ +++ TGL +++LP G + DR+T+++ N+ GS KL L
Sbjct: 184 DEQIYSASVTGLYWKLLPEQAAPPGAGDPGAGGCGRRWRGDRVTVLLAANLTGSHKLKPL 243
Query: 232 VIGKKRTPHCFK--GLKSLPVCYEANRMAWMTSDVFEQWMRKLDEEF----------QAQ 279
VIG+ P + P Y + AW++ + W EEF
Sbjct: 244 VIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGW---FFEEFVPGVKRYLRRSCL 300
Query: 280 QRRVVIFVESFPAHPEVKNLKSIE--------------------------LAFFPSCLSS 313
Q++ V+ V P ++ +++ F S SS
Sbjct: 301 QQKAVLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEELQTPDGAVRVLFLSKGSS 360
Query: 314 KC---IAMKQGVIKSLKIKYRHCLIKKFLSSVEGSK-EF--TFSLLDAVDTLHLCWRAVT 367
+ ++QGV+ + K Y+ L++ +S GS +F +F L D + L W V
Sbjct: 361 RAHIPAPLEQGVVAAFKQLYKRELLRLAVSCASGSPLDFMRSFMLKDMLYLAGLSWDLVQ 420
Query: 368 PETIVKSY---EEAGFKSQKGESDITN-------AEKDTGLDLVADALGAGVEFPEGLSI 417
+I + + A F+ + GE AE L + + +
Sbjct: 421 AGSIERCWLLGLRAAFEPRPGEDSAGQPAQAEEAAEHSRVLSDLTHLAALAYKCLAPEEV 480
Query: 418 EEYAALDDD---LETCE---------AAPNGDSICTKESKSDETGFYTSDEEDDDGSPGT 465
E+ LDDD E C AAP + E DEE+ GT
Sbjct: 481 AEWLHLDDDGGPPEGCREEVGPALPPAAPPAPASLPSAMGGGE------DEEEATDYGGT 534
Query: 466 ELPLPSKSEAITALDTLKKFLRSQDMNDGLQNSLADLENFIN 507
+P+ EA+ L+T ++L +QD + L L + I+
Sbjct: 535 S--VPTAGEAVRGLETALRWLENQDPREVGPLRLVQLRSLIS 574
>gi|239755627 PREDICTED: similar to cag [Homo sapiens]
Length = 392
Score = 71.2 bits (173), Expect = 2e-12
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 19/147 (12%)
Query: 12 PVTVKKKKS-----LSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVLEA 66
PV + KK LSI +K+ ++ ++SG + EYG+ ++ + K KDK+L+
Sbjct: 52 PVNISDKKKRKHLCLSIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKF 111
Query: 67 F---ESLRFDPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGH 123
+ + RK L A DL+ L W R + ++P+NG ++ +A K+ H
Sbjct: 112 YAESDEQILMKNRKTLHKAKNEDLDRVLKEWIRQRRSEHMPLNGMLIMKQA-----KIYH 166
Query: 124 NDFKC------SNGWLDRFKSRYGLVF 144
N+ K S GWL +FK R+G+ F
Sbjct: 167 NELKIEGNCEYSTGWLQKFKKRHGIKF 193
>gi|239750125 PREDICTED: hypothetical protein XP_002347296 [Homo
sapiens]
Length = 392
Score = 71.2 bits (173), Expect = 2e-12
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 19/147 (12%)
Query: 12 PVTVKKKKS-----LSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVLEA 66
PV + KK LSI +K+ ++ ++SG + EYG+ ++ + K KDK+L+
Sbjct: 52 PVNISDKKKRKHLCLSIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKF 111
Query: 67 F---ESLRFDPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGH 123
+ + RK L A DL+ L W R + ++P+NG ++ +A K+ H
Sbjct: 112 YAESDEQILMKNRKTLHKAKNEDLDRVLKEWIRQRRSEHMPLNGMLIMKQA-----KIYH 166
Query: 124 NDFKC------SNGWLDRFKSRYGLVF 144
N+ K S GWL +FK R+G+ F
Sbjct: 167 NELKIEGNCEYSTGWLQKFKKRHGIKF 193
>gi|239744433 PREDICTED: hypothetical protein XP_002343159 [Homo
sapiens]
Length = 392
Score = 71.2 bits (173), Expect = 2e-12
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 19/147 (12%)
Query: 12 PVTVKKKKS-----LSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVLEA 66
PV + KK LSI +K+ ++ ++SG + EYG+ ++ + K KDK+L+
Sbjct: 52 PVNISDKKKRKHLCLSIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKF 111
Query: 67 F---ESLRFDPKRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGH 123
+ + RK L A DL+ L W R + ++P+NG ++ +A K+ H
Sbjct: 112 YAESDEQILMKNRKTLHKAKNEDLDRVLKEWIRQRRSEHMPLNGMLIMKQA-----KIYH 166
Query: 124 NDFKC------SNGWLDRFKSRYGLVF 144
N+ K S GWL +FK R+G+ F
Sbjct: 167 NELKIEGNCEYSTGWLQKFKKRHGIKF 193
>gi|22027480 pogo transposable element with KRAB domain [Homo
sapiens]
Length = 609
Score = 65.5 bits (158), Expect = 1e-10
Identities = 87/393 (22%), Positives = 165/393 (41%), Gaps = 31/393 (7%)
Query: 18 KKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLRFDPKRK 77
++S K+ ++ ES + A ++G+ + ++ K K ++ A R K
Sbjct: 197 RRSYDAGFKLMVVEYAES-TNNCQAAKQFGVLEKNVRDWRKVKPQLQNAHAMRRAFRGPK 255
Query: 78 RLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLG--HNDFKCSNGWLDR 135
R A +++ + + R Q P+ ++LKA + AQ++ FK S GW R
Sbjct: 256 NGRFAL---VDQRVAEYVRYMQAKGDPITREAMQLKALEIAQEMNIPEKGFKASLGWCRR 312
Query: 136 FKSRYGLVFRAQPVEATGVPVD--PSTVWYQ-NVLPY-YLNDYHPKNVFNIKETGLLYRM 191
RY L R + +P D V YQ +VL +DY + N ET + +
Sbjct: 313 MMRRYDLSLRHKVPVPQHLPEDLTEKLVTYQRSVLALRRAHDYEVAQMGNADETPICLEV 372
Query: 192 LPTNTFAFKGETCSVGKLC---KDRITLVVGTNMDGSEKLPLLVIGKKRTPHCFKGLKSL 248
T +GE + K K +IT ++G DG + P +++ R + G
Sbjct: 373 PSRVTVDNQGEKPVLVKTPGREKLKITAMLGVLADGRKLPPYIIL---RGTYIPPGKFPS 429
Query: 249 PVCYEANRMAWMTSDVFEQWMRKL--DEEFQAQQRRVVIFVESFPAH--PEVKN---LKS 301
+ +R WMT D+ + W+ + ++R ++ + F H VKN +
Sbjct: 430 GMEIRCHRYGWMTEDLMQDWLEVVWRRRTGAVPKQRGMLILNGFRGHATDSVKNSMESMN 489
Query: 302 IELAFFPSCLSSKCIAMKQGVIK----SLKIKYRHCLI--KKFLSSVEGSKEFTFSLLDA 355
++ P L+S+ + V K S++ +Y + L+ LS +K+ L
Sbjct: 490 TDMVIIPGGLTSQLQVLDVVVYKPLNDSVRAQYSNWLLAGNLALSPTGNAKKPPLGLF-- 547
Query: 356 VDTLHLCWRAVTPETIVKSYEEAGFKSQKGESD 388
++ + + W +++ E+IV+ +++ S E D
Sbjct: 548 LEWVMVAWNSISSESIVQGFKKCHISSNLEEED 580
>gi|49619234 hypothetical protein LOC92806 [Homo sapiens]
Length = 187
Score = 54.3 bits (129), Expect = 3e-07
Identities = 35/144 (24%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 3 EASVDASTLPVTVKKKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDK 62
E DA+ +P +++K+++++ K++++ E+G+K ++IA + +++++I +K+K
Sbjct: 4 ERPTDATVIPSAKRERKAITLDLKLEVLRRFEAGEKLSQIAKALDLAISTVATIRDSKEK 63
Query: 63 VLEAFESLRFDPKRKRL---RTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKA--NDF 117
+ +A + + RL R+A +E+ L W N ++ +++ KA +D
Sbjct: 64 I-KASSQIATPLRASRLTRHRSAVMESMEQLLSLWLEDQSQPNATLSAAIVQEKAEFDDL 122
Query: 118 AQKLGHND----FKCSNGWLDRFK 137
++ G F S GWL RFK
Sbjct: 123 QREHGEGSQTERFHASQGWLVRFK 146
>gi|8922952 cappuccino [Homo sapiens]
Length = 217
Score = 34.7 bits (78), Expect = 0.21
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 408 GVEFPEGLSIEEYAALDDDLETCEAAPNGDSICTKESKSDETGFYTSDEEDDDGSPGTEL 467
G PEGL+ ++ E AA +GDS +S S +G + DE +DG+PG +L
Sbjct: 8 GGALPEGLA--------EEAEPQGAAWSGDSGTVSQSHSSASGPW-EDEGAEDGAPGRDL 58
Query: 468 PLPSKSEA 475
PL ++ A
Sbjct: 59 PLLRRAAA 66
>gi|122937333 zinc finger protein 697 [Homo sapiens]
Length = 545
Score = 34.3 bits (77), Expect = 0.28
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Query: 413 EGLSIEEYAALDDDLETCEAAPNGDSICTKESKSDETGFYTSDEEDDDGSPGTELPLPSK 472
EG E + D EA P+ ICT+ S+E G EEDD P
Sbjct: 50 EGHPEPEMGSNPQDSRHREAVPD---ICTEGQLSEEEGVSVRGEEDDQSGVADMAMFPGL 106
Query: 473 SEAITALDTLKKFLRSQDMNDGLQNSLADLE 503
SE+ D++ + LR D +N L + E
Sbjct: 107 SES----DSISRSLREDDDESAGENRLEEEE 133
>gi|119874201 furry-like [Homo sapiens]
Length = 3013
Score = 33.5 bits (75), Expect = 0.47
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 410 EFPEGLSIEEYAALDDDLETCEAAPNGDSICTKESKSDETGFYTSDEEDDDGSPGTEL-P 468
E PE L+ E Y + + A D C +E ++D +G + DEE+ DG P + P
Sbjct: 2604 EMPEPLAPESYPESVCEEDVTLALKELDERC-EEEEADFSGLSSQDEEEQDGFPEVQTSP 2662
Query: 469 LPS 471
LPS
Sbjct: 2663 LPS 2665
>gi|197100900 iroquois homeobox 2 [Homo sapiens]
Length = 471
Score = 32.7 bits (73), Expect = 0.81
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 17/110 (15%)
Query: 373 KSYEEAGFKSQKGESDITNAEKDTGLDLVADALGAGVEFPEGLSIEEYAALDDDLETCEA 432
+S +E+ K+Q+G T+AE D G+ L D+L S E D + C A
Sbjct: 198 RSKDESPDKAQEGTE--TSAE-DEGISLHVDSLT-----DHSCSAES----DGEKLPCRA 245
Query: 433 APNGDSICTKESKSDETGFYTSDEEDDD--GSPGTELPLPSKSEAITALD 480
GD +C S+ + D+EDDD G G P P S +T L+
Sbjct: 246 ---GDPLCESGSECKDKYDDLEDDEDDDEEGERGLAPPKPVTSSPLTGLE 292
>gi|39930475 iroquois homeobox 2 [Homo sapiens]
Length = 471
Score = 32.7 bits (73), Expect = 0.81
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 17/110 (15%)
Query: 373 KSYEEAGFKSQKGESDITNAEKDTGLDLVADALGAGVEFPEGLSIEEYAALDDDLETCEA 432
+S +E+ K+Q+G T+AE D G+ L D+L S E D + C A
Sbjct: 198 RSKDESPDKAQEGTE--TSAE-DEGISLHVDSLT-----DHSCSAES----DGEKLPCRA 245
Query: 433 APNGDSICTKESKSDETGFYTSDEEDDD--GSPGTELPLPSKSEAITALD 480
GD +C S+ + D+EDDD G G P P S +T L+
Sbjct: 246 ---GDPLCESGSECKDKYDDLEDDEDDDEEGERGLAPPKPVTSSPLTGLE 292
>gi|61102725 la related protein isoform 2 [Homo sapiens]
Length = 1096
Score = 32.7 bits (73), Expect = 0.81
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 9/53 (16%)
Query: 452 YTSDEEDDDGSPGTELPLPSKSEAITALDTLKKFLRSQDMNDGLQNSLADLEN 504
Y + E GSP P+P+K+E ++ L TL K GL SL DL++
Sbjct: 511 YQKETESAPGSPRAVTPVPTKTEEVSNLKTLPK---------GLSASLPDLDS 554
>gi|39725634 la related protein isoform 1 [Homo sapiens]
Length = 1019
Score = 32.7 bits (73), Expect = 0.81
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 9/53 (16%)
Query: 452 YTSDEEDDDGSPGTELPLPSKSEAITALDTLKKFLRSQDMNDGLQNSLADLEN 504
Y + E GSP P+P+K+E ++ L TL K GL SL DL++
Sbjct: 434 YQKETESAPGSPRAVTPVPTKTEEVSNLKTLPK---------GLSASLPDLDS 477
>gi|7657013 apoptosis antagonizing transcription factor [Homo
sapiens]
Length = 560
Score = 32.3 bits (72), Expect = 1.1
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 401 VADALGAGVEFPEGLSIEEYAALDDDLETCEAAPNGDSICTKESKS 446
++D G+G E EGL +EEY +DDL E GD +K+S+S
Sbjct: 98 ISDEEGSGDEDSEGLGLEEYD--EDDLGAAEEQECGDHRESKKSRS 141
>gi|90652851 zinc finger transcription factor TRPS1 [Homo sapiens]
Length = 1294
Score = 31.6 bits (70), Expect = 1.8
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 104 PVNGPMLRLKANDFAQKLGHNDFKCSNGWLDRFKSRYGLVFRAQPVEATGVPVDPSTVWY 163
P P+ + + F HNDF+ WL RF S+Y L P + VP P+
Sbjct: 1095 PPGSPIEKYQYPLFGLPFVHNDFQSEADWL-RFWSKYKLSVPGNPHYLSHVPGLPNPC-- 1151
Query: 164 QNVLPY 169
QN +PY
Sbjct: 1152 QNYVPY 1157
>gi|153945734 teashirt zinc finger homeobox 2 [Homo sapiens]
Length = 1034
Score = 31.6 bits (70), Expect = 1.8
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 425 DDLETCEAAPNGDSICTKESKSDETGFYTSDEEDDDGSPGTELPLPSKSEAITALDTLKK 484
+ +++ APN DS+ K S S+ D + TEL SK E +K
Sbjct: 427 EKMQSLSEAPNSDSLAPKPS---------SNSASDCTASTTELKKESKKERPEETSKDEK 477
Query: 485 FLRSQDMNDGLQNSL 499
++S+D D LQ L
Sbjct: 478 VVKSEDYEDPLQKPL 492
>gi|226497734 RNA binding motif protein 19 [Homo sapiens]
Length = 960
Score = 30.8 bits (68), Expect = 3.1
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 384 KGESDITNAEKDTGLDLVADALGAGVEFPEGLSIEEYAALDDDLETCEAAPN-----GDS 438
K SD N + D+G + ++ GAG + E S+E AA+ +L + + G S
Sbjct: 164 KPASDYLNFDSDSGQE--SEEEGAGEDLEEEASLEPKAAVQKELSDMDYLKSKMVKAGSS 221
Query: 439 ICTKESKSDETGFY-----TSDEEDDDGSP 463
++E +S++ + ++EED +P
Sbjct: 222 SSSEEEESEDEAVHCDEGSEAEEEDSSATP 251
>gi|226497654 RNA binding motif protein 19 [Homo sapiens]
Length = 960
Score = 30.8 bits (68), Expect = 3.1
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 384 KGESDITNAEKDTGLDLVADALGAGVEFPEGLSIEEYAALDDDLETCEAAPN-----GDS 438
K SD N + D+G + ++ GAG + E S+E AA+ +L + + G S
Sbjct: 164 KPASDYLNFDSDSGQE--SEEEGAGEDLEEEASLEPKAAVQKELSDMDYLKSKMVKAGSS 221
Query: 439 ICTKESKSDETGFY-----TSDEEDDDGSP 463
++E +S++ + ++EED +P
Sbjct: 222 SSSEEEESEDEAVHCDEGSEAEEEDSSATP 251
>gi|226497574 RNA binding motif protein 19 [Homo sapiens]
Length = 960
Score = 30.8 bits (68), Expect = 3.1
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 384 KGESDITNAEKDTGLDLVADALGAGVEFPEGLSIEEYAALDDDLETCEAAPN-----GDS 438
K SD N + D+G + ++ GAG + E S+E AA+ +L + + G S
Sbjct: 164 KPASDYLNFDSDSGQE--SEEEGAGEDLEEEASLEPKAAVQKELSDMDYLKSKMVKAGSS 221
Query: 439 ICTKESKSDETGFY-----TSDEEDDDGSP 463
++E +S++ + ++EED +P
Sbjct: 222 SSSEEEESEDEAVHCDEGSEAEEEDSSATP 251
>gi|148727331 ubiquitin specific peptidase 5 isoform 1 [Homo
sapiens]
Length = 858
Score = 30.8 bits (68), Expect = 3.1
Identities = 20/72 (27%), Positives = 27/72 (37%)
Query: 397 GLDLVADALGAGVEFPEGLSIEEYAALDDDLETCEAAPNGDSICTKESKSDETGFYTSDE 456
GLD V L +E PE L I + E + T + GFY +++
Sbjct: 579 GLDWVPKKLDVSIEMPEELDISQLRGTGLQPGEEELPDIAPPLVTPDEPKGSLGFYGNED 638
Query: 457 EDDDGSPGTELP 468
ED SP P
Sbjct: 639 EDSFCSPHFSSP 650
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,000,890
Number of Sequences: 37866
Number of extensions: 860392
Number of successful extensions: 2656
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 2571
Number of HSP's gapped (non-prelim): 49
length of query: 512
length of database: 18,247,518
effective HSP length: 107
effective length of query: 405
effective length of database: 14,195,856
effective search space: 5749321680
effective search space used: 5749321680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.