Guide to the Human Genome
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Name: AATF Sequence: fasta or formatted (560aa) NCBI GI: 7657013
Description:

apoptosis antagonizing transcription factor

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         37           2
 C cysteine            0.4          2           1
 D aspartate           9.6         54           4
 E glutamate          11.4         64           4
 F phenylalanine       3.6         20           1
 G glycine             7.0         39           2
 H histidine           2.3         13           1
 I isoleucine          2.9         16           1
 K lysine              7.7         43           2
 L leucine            10.4         58           2
 M methionine          1.8         10           1
 N asparagine          2.0         11           1
 P proline             5.0         28           2
 Q glutamine           4.6         26           2
 R arginine            6.4         36           3
 S serine              8.0         45           2
 T threonine           3.9         22           2
 V valine              3.9         22           2
 W tryptophan          0.9          5           1
 Y tyrosine            1.6          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   apoptosis antagonizing transcription factor 
SETD1B                0.029   SET domain containing 1B 
RPGR                  0.028   retinitis pigmentosa GTPase regulator isoform C [Hom...
NSBP1                 0.026   nucleosomal binding protein 1 
SLC24A1               0.023   solute carrier family 24 (sodium/potassium/calcium ex...
HUWE1                 0.022   HECT, UBA and WWE domain containing 1 
CDC2L2                0.021   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.021   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.021   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.021   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.021   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.021   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.021   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CENPB                 0.020   centromere protein B 
NASP                  0.020   nuclear autoantigenic sperm protein isoform 2 
NASP                  0.020   nuclear autoantigenic sperm protein isoform 1 
TCHH                  0.019   trichohyalin 
NEFM                  0.019   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.019   neurofilament, medium polypeptide 150kDa isoform 2 ...
ANP32B                0.019   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
HTATSF1               0.018   HIV-1 Tat specific factor 1 
HTATSF1               0.018   HIV-1 Tat specific factor 1 
HDGFRP3               0.018   hepatoma-derived growth factor, related protein 3 [Ho...
UBTF                  0.018   upstream binding transcription factor, RNA polymera...
UBTF                  0.018   upstream binding transcription factor, RNA polymera...
UBTF                  0.018   upstream binding transcription factor, RNA polymerase...
SCRIB                 0.018   scribble isoform b 
SCRIB                 0.018   scribble isoform a 
MYT1L                 0.018   myelin transcription factor 1-like 
EIF3CL                0.017   eukaryotic translation initiation factor 3, subunit...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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