Guide to the Human Genome
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Name: TSHZ2 Sequence: fasta or formatted (1034aa) NCBI GI: 153945734
Description:

teashirt zinc finger homeobox 2

Referenced in:

Stomach, Small Intestine, and Colon
Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         63           2
 C cysteine            2.3         24           2
 D aspartate           5.6         58           2
 E glutamate           7.4         76           6
 F phenylalanine       2.8         29           1
 G glycine             4.3         44           3
 H histidine           3.0         31           2
 I isoleucine          2.2         23           1
 K lysine              9.4         97           2
 L leucine             8.2         85           2
 M methionine          2.7         28           2
 N asparagine          3.8         39           2
 P proline             6.1         63           2
 Q glutamine           5.6         58           2
 R arginine            4.0         41           2
 S serine             13.4        139           3
 T threonine           5.7         59           2
 V valine              4.5         47           2
 W tryptophan          0.7          7           1
 Y tyrosine            2.2         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   teashirt zinc finger homeobox 2 
TSHZ1                 0.451   teashirt family zinc finger 1 
TSHZ3                 0.422   zinc finger protein 537 
ZNF728                0.013   PREDICTED: zinc finger protein 728 
ZNF728                0.013   PREDICTED: zinc finger protein 728 
ZNF676                0.012   zinc finger protein 676 
MYST3                 0.010   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.010   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.010   MYST histone acetyltransferase (monocytic leukemia)...
ZNF492                0.009   zinc finger protein 492 
MLLT1                 0.009   myeloid/lymphoid or mixed-lineage leukemia (trithora...
ZNF728                0.009   PREDICTED: zinc finger protein 728 
ZNF85                 0.009   zinc finger protein 85 
NOLC1                 0.009   nucleolar and coiled-body phosphoprotein 1 
ZNF98                 0.009   zinc finger protein 98 
ZNF711                0.009   zinc finger protein 711 
ZNF493                0.009   zinc finger protein 493 isoform 1 
ZNF493                0.009   zinc finger protein 493 isoform 3 
ZFHX3                 0.009   AT-binding transcription factor 1 
ZNF626                0.009   zinc finger protein 626 isoform 1 
ZNF445                0.009   zinc finger protein 445 
NEFM                  0.008   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.008   neurofilament, medium polypeptide 150kDa isoform 2 ...
ZNF274                0.008   zinc finger protein 274 isoform c 
ZNF274                0.008   zinc finger protein 274 isoform a 
ZNF274                0.008   zinc finger protein 274 isoform b 
ZNF506                0.008   zinc finger protein 506 isoform 1 
ZNF737                0.008   zinc finger protein 737 
ZNF506                0.008   zinc finger protein 506 isoform 2 
ZNF737                0.008   PREDICTED: zinc finger protein 737 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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