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Search of human proteins with 22209001
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22209001 hypothetical protein LOC200765 [Homo sapiens]
(591 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22209001 hypothetical protein LOC200765 [Homo sapiens] 1164 0.0
gi|23312392 tigger transposable element derived 2 [Homo sapiens] 220 2e-57
gi|22547224 jerky homolog-like [Homo sapiens] 218 1e-56
gi|239747106 PREDICTED: similar to HDCMB45P [Homo sapiens] 206 4e-53
gi|22325392 tigger transposable element derived 7 [Homo sapiens] 179 8e-45
gi|117938293 jerky isoform a [Homo sapiens] 170 3e-42
gi|117938295 jerky isoform b [Homo sapiens] 170 3e-42
gi|13569924 hypothetical protein LOC81789 [Homo sapiens] 160 2e-39
gi|22219477 tigger transposable element derived 4 [Homo sapiens] 137 3e-32
gi|144922631 tigger transposable element derived 5 [Homo sapiens] 123 4e-28
gi|49619234 hypothetical protein LOC92806 [Homo sapiens] 105 9e-23
gi|21735415 centromere protein B [Homo sapiens] 95 2e-19
gi|47059046 dachsous 2 isoform 1 [Homo sapiens] 82 1e-15
gi|23312394 tigger transposable element derived 3 [Homo sapiens] 72 1e-12
gi|239755627 PREDICTED: similar to cag [Homo sapiens] 62 1e-09
gi|239750125 PREDICTED: hypothetical protein XP_002347296 [Homo ... 62 1e-09
gi|239744433 PREDICTED: hypothetical protein XP_002343159 [Homo ... 62 1e-09
gi|223005859 WD repeat domain 67 isoform 1 [Homo sapiens] 34 0.33
gi|239756639 PREDICTED: similar to hCG1802057 [Homo sapiens] 33 0.56
gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 33 0.56
gi|239751125 PREDICTED: hypothetical protein XP_002347719 [Homo ... 33 0.56
gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 33 0.56
gi|239745616 PREDICTED: hypothetical protein XP_002344143 [Homo ... 33 0.56
gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 33 0.56
gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 33 0.96
gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 33 0.96
gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 33 0.96
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 33 0.96
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 32 1.3
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 32 1.3
>gi|22209001 hypothetical protein LOC200765 [Homo sapiens]
Length = 591
Score = 1164 bits (3012), Expect = 0.0
Identities = 591/591 (100%), Positives = 591/591 (100%)
Query: 1 MASKCSSERKSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKE 60
MASKCSSERKSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKE
Sbjct: 1 MASKCSSERKSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKE 60
Query: 61 VKSATPMNTRMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAER 120
VKSATPMNTRMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAER
Sbjct: 61 VKSATPMNTRMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAER 120
Query: 121 GVEAAEEKFEASRGWFMRFKERSHFHNIKAQGEAASADVEAAASYPEALAKIIDEGGYTK 180
GVEAAEEKFEASRGWFMRFKERSHFHNIKAQGEAASADVEAAASYPEALAKIIDEGGYTK
Sbjct: 121 GVEAAEEKFEASRGWFMRFKERSHFHNIKAQGEAASADVEAAASYPEALAKIIDEGGYTK 180
Query: 181 QQIFNVDETAFYWKKMPSRTFIAREEKSVPGFKASKDRLTLLLGANAAGDFKLKPMLIYH 240
QQIFNVDETAFYWKKMPSRTFIAREEKSVPGFKASKDRLTLLLGANAAGDFKLKPMLIYH
Sbjct: 181 QQIFNVDETAFYWKKMPSRTFIAREEKSVPGFKASKDRLTLLLGANAAGDFKLKPMLIYH 240
Query: 241 SENPRALKNYTKSTLPVLYKWNSKARMTAHLFTAWFTEYFKPTVETYCSEKKIPFKILLL 300
SENPRALKNYTKSTLPVLYKWNSKARMTAHLFTAWFTEYFKPTVETYCSEKKIPFKILLL
Sbjct: 241 SENPRALKNYTKSTLPVLYKWNSKARMTAHLFTAWFTEYFKPTVETYCSEKKIPFKILLL 300
Query: 301 IDNAPSHPRALMEIYEEINVIFMPANTTSILQPMDQGVISTFKSYYLRNTFHKALAAMDS 360
IDNAPSHPRALMEIYEEINVIFMPANTTSILQPMDQGVISTFKSYYLRNTFHKALAAMDS
Sbjct: 301 IDNAPSHPRALMEIYEEINVIFMPANTTSILQPMDQGVISTFKSYYLRNTFHKALAAMDS 360
Query: 361 DVSDGSGQSKLKTFWKGFTILDAIKNIRDSWEEVKLSTLTGVWKKLIPTLIDDYEGFKTS 420
DVSDGSGQSKLKTFWKGFTILDAIKNIRDSWEEVKLSTLTGVWKKLIPTLIDDYEGFKTS
Sbjct: 361 DVSDGSGQSKLKTFWKGFTILDAIKNIRDSWEEVKLSTLTGVWKKLIPTLIDDYEGFKTS 420
Query: 421 VEEVSADVVEIAKELELEVEPEDVTELLQSHDKTLTDEELFLMDAQRKWFLEMESTPGED 480
VEEVSADVVEIAKELELEVEPEDVTELLQSHDKTLTDEELFLMDAQRKWFLEMESTPGED
Sbjct: 421 VEEVSADVVEIAKELELEVEPEDVTELLQSHDKTLTDEELFLMDAQRKWFLEMESTPGED 480
Query: 481 AVNIVEMTTKDLEYYINLVDKAAAGFERIDSNFERSSTVGKMLSNSIACYREIFHERKSQ 540
AVNIVEMTTKDLEYYINLVDKAAAGFERIDSNFERSSTVGKMLSNSIACYREIFHERKSQ
Sbjct: 481 AVNIVEMTTKDLEYYINLVDKAAAGFERIDSNFERSSTVGKMLSNSIACYREIFHERKSQ 540
Query: 541 LMRKASPMSYFRKLPQPPQPSAATTLTSQQPSTSRQDPPPAKRVRLTEGSD 591
LMRKASPMSYFRKLPQPPQPSAATTLTSQQPSTSRQDPPPAKRVRLTEGSD
Sbjct: 541 LMRKASPMSYFRKLPQPPQPSAATTLTSQQPSTSRQDPPPAKRVRLTEGSD 591
>gi|23312392 tigger transposable element derived 2 [Homo sapiens]
Length = 525
Score = 220 bits (561), Expect = 2e-57
Identities = 135/456 (29%), Positives = 229/456 (50%), Gaps = 28/456 (6%)
Query: 9 RKSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMN 68
++ R LT+ KL++IK EEG+S ++ G+ TV + KE+ + S+ P +
Sbjct: 4 KRKRVVLTIKDKLDIIKKLEEGISFKKLSVVYGIGESTVRDIKKNKERIINYANSSDPTS 63
Query: 69 TRMIRK--RNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGVEAAE 126
RK ++S ++++V++ W Q + IP+S ++ +A F+++ E
Sbjct: 64 GVSKRKSMKSSTYEELDRVMIEWFNQQKTDGIPVSGTICAKQAKFFFDAL-------GME 116
Query: 127 EKFEASRGWFMRFKERSHFHNIKAQGEAASADVEAAASYPEALAKIIDEGGYTKQQIFNV 186
F AS GW RFK+R +G D AA + + + +++ +QI+
Sbjct: 117 GDFNASSGWLTRFKQRHGIPKAAGKGTKLKGDETAAREFCGSFQEFVEKENLQPEQIYGA 176
Query: 187 DETAFYWKKMPSRTFIAREEKSVPGFKASKDRLTLLLGANAAGDFKLKPMLIYHSENPRA 246
D+T +WK +PSRT ++S G ++S++R+ ++ ANA G KL ++ ++ PRA
Sbjct: 177 DQTGLFWKCLPSRTLTLETDQSTSGCRSSRERIIIMCCANATGLHKLNLCVVGKAKKPRA 236
Query: 247 LKNYTKSTLPVLYKWNSKARMTAHLFTAWFTEYFKPTVETYCSEKKIPFKILLLIDNAPS 306
K S LPV Y A + +F WF +YF P V+ + K + K +LL+D P+
Sbjct: 237 FKGTDLSNLPVTYYSQKGAWIEQSVFRQWFEKYFVPQVQKHLKSKGLLEKAVLLLDFPPA 296
Query: 307 HPRALMEIYEEINVI--FMPANTTSILQPMDQGVISTFKSYYLRNTFHKALAAMDSDVSD 364
P M ++ +I ++P N TS++QPM QGV++T K YY K + +
Sbjct: 297 RPNEEMLSSDDGRIIVKYLPPNVTSLIQPMSQGVLATVKRYYRAGLLQKYM-------DE 349
Query: 365 GSGQSKLKTFWKGFTILDAIKNIRDSWEEVKLSTLTGVWKKLIPTLIDDYEGFKTSVEE- 423
G+ K FWK T+LDAI + +W VK ST+T WKKL P + E +++E
Sbjct: 350 GNDP---KIFWKNLTVLDAIYEVSRAWNMVKSSTITKAWKKLFP---GNEENSGMNIDEG 403
Query: 424 --VSADVVEIAKELELEVEPEDVTELLQSHDKTLTD 457
++A++ + + E E E D+ + Q D +D
Sbjct: 404 AILAANLATVLQNTE-ECEHVDIENIDQWFDSRSSD 438
>gi|22547224 jerky homolog-like [Homo sapiens]
Length = 524
Score = 218 bits (555), Expect = 1e-56
Identities = 139/469 (29%), Positives = 236/469 (50%), Gaps = 36/469 (7%)
Query: 7 SERKSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATP 66
S ++ R LT+ KL++IK E+G S ++ G+ TV + KEK + S+
Sbjct: 2 SGKRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSD- 60
Query: 67 MNTRMIRKRNSL----IADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGV 122
+T ++ KR S+ ++++ ++ W Q ++ P+S + +A F ++
Sbjct: 61 -STSLLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYAL------ 113
Query: 123 EAAEEKFEASRGWFMRFKERSHFHNIKAQGEAASADVEAAASYPEALAKIIDEGGYTKQQ 182
+ F S GW RFK+R I + E + D A + I+ +Q
Sbjct: 114 -GMDGDFNPSAGWLTRFKQRHSIREINIRNERLNGDETAVEDFCNNFRDFIERENLQPEQ 172
Query: 183 IFNVDETAFYWKKMPSRTFIAREEKSVPGFKASKDRLTLLLGANAAGDFKLKPMLIYHSE 242
I+N DET +WK +PSR + + + +VPG K+ ++R+T++ ANA G KLK ++ ++
Sbjct: 173 IYNADETGLFWKCLPSRISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCVVGKAK 232
Query: 243 NPRALKNYTKSTLPVLYKWNSKARMTAHLFTAWFTEYFKPTVETYCSEKKIPFKILLLID 302
PR+ K+ LPV Y A M +F WF + F P V Y K + K +LL+D
Sbjct: 233 KPRSFKSTDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLD 292
Query: 303 NAPSHP--RALMEIYEEINVIFMPANTTSILQPMDQGVISTFKSYYLRNTFHKALAAMDS 360
N+P+HP L +I ++P N S++QP DQGVI+T K Y + +
Sbjct: 293 NSPTHPNENVLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNY-------RAGLLQN 345
Query: 361 DVSDGSGQSKLKTFWKGFTILDAIKNIRDSWEEVKLSTLTGVWKKLIPTLIDDYEGFKTS 420
++ +G + LK+FWK T+LDA+ I +W VK T++ WKK++P ++++ E
Sbjct: 346 NLEEG---NDLKSFWKKLTLLDALYEIAMAWNLVKPVTISRAWKKILP-MVEEKESLDFD 401
Query: 421 VEEVS----ADVVEIAKELELEVEPEDVTELLQSHD-----KTLTDEEL 460
VE++S A +++ K LE V E++ + L+ + LTD E+
Sbjct: 402 VEDISVATVAAILQHTKGLE-NVTTENLEKWLEVDSTEPGYEVLTDSEI 449
>gi|239747106 PREDICTED: similar to HDCMB45P [Homo sapiens]
Length = 178
Score = 206 bits (525), Expect = 4e-53
Identities = 109/177 (61%), Positives = 138/177 (77%), Gaps = 9/177 (5%)
Query: 406 LIPTLIDDYEGFKTSVEEVSADVVEIAKELELEVEPEDVTELLQSHDKTLTDEELFLMDA 465
+IP L DD+EGF+TS+EE++AD+VE +ELELE E EDVT+ LQSH KTLT+E+LFLMD
Sbjct: 1 MIPALTDDFEGFQTSMEEITADMVETVRELELEGESEDVTQFLQSHKKTLTNEKLFLMDG 60
Query: 466 QRKWFLEMESTPGEDAVNIVEMTTKDLEYYINLVDKAAAGFERIDSNFERSSTVGKMLSN 525
+R WFLEMESTPGEDA+N V+MTTKDL+Y +L+DK AGFER DSNFERS TV KMLSN
Sbjct: 61 KRTWFLEMESTPGEDAMNTVKMTTKDLKYDRSLIDK--AGFERTDSNFERSHTVSKMLSN 118
Query: 526 SIACYREIFHERKSQLMRKASPMSYFRKLPQP------PQPSAATTLTSQQPSTSRQ 576
SI CYR+IF+ER+SQLM++ S +SY + P P SA + + +PSTS++
Sbjct: 119 SIMCYRDIFYERESQLMQQTSLLSYEIAIATPTFSNYYPDWSAPINIVA-RPSTSKK 174
>gi|22325392 tigger transposable element derived 7 [Homo sapiens]
Length = 549
Score = 179 bits (453), Expect = 8e-45
Identities = 135/453 (29%), Positives = 218/453 (48%), Gaps = 30/453 (6%)
Query: 7 SERKSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEV-KSAT 65
++R T+L L +K++++ E G S + G+ + T + K+ L V K
Sbjct: 2 NKRGKYTTLNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQDM 61
Query: 66 PMNTRMIRKRNS--LIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGVE 123
P+ RKR + D++ + +W + + S +P+ +Q AER
Sbjct: 62 PLVGAEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQ---------AAAERFAR 112
Query: 124 A-AEEKFEASRGWFMRFKERSHFHNIKAQGEAASADV-EAAASYPEALAKIIDEGGYTKQ 181
F+AS GW RF+ R N K GE + V E + + L+ II E
Sbjct: 113 CFGRTDFKASTGWLFRFRNRHAIGNRKGCGEQVLSSVSENVEPFRQKLSMIIKEEKLCLA 172
Query: 182 QIFNVDETAFYWKKMPSRTFIAREEKSVPGFKASKDRLTLLLGANAAGDFKLKPMLIYHS 241
Q+++ DET +WK MP + +R++ +PG K +K+RL+ L ANA G KLK ++I S
Sbjct: 173 QLYSGDETDLFWKSMPENSQASRKDICLPGKKINKERLSAFLCANADGTHKLKSIIIGKS 232
Query: 242 ENPRALKNYTKSTLPVLYKWNSKARMTAHLFTAWFTEYFKPTVETY----CSEKKIPFKI 297
+ P+++K T STLPV+YK + T LF+ WF + F P V + +
Sbjct: 233 KLPKSVKEDT-STLPVIYKPSKDVWFTRELFSEWFFQNFVPEVRHFQLNVLRFHDEDVRA 291
Query: 298 LLLIDNAPSHPRALMEIYEE--INVIFMPANTTSILQPMDQGVISTFKSYYLRNTFHKAL 355
LLL+D+ P+HP + E+ I +F P NT++++QPM+QGVI + K Y ++L
Sbjct: 292 LLLLDSCPAHPSSESLTSEDGRIKCMFFPHNTSTLIQPMNQGVILSCKRLYRWKQLEESL 351
Query: 356 AAM----DSDVSDGSGQSKLKTFWKGFTILDAIKNIRDSWEEVKLSTLTGVWKKLIPTLI 411
D G SK+K + I AI N SWEEVK T+ W+ L+
Sbjct: 352 VIFEESDDEQEKGDKGVSKIKI----YNIKSAIFNWAKSWEEVKQITIANAWENLLYKKE 407
Query: 412 DDYEGFKTSVEEVSADVVEIAKELELEVEPEDV 444
+Y+ F+ +++E ELE +++ + V
Sbjct: 408 PEYD-FQGLEHGDYREILEKCGELETKLDDDRV 439
>gi|117938293 jerky isoform a [Homo sapiens]
Length = 568
Score = 170 bits (431), Expect = 3e-42
Identities = 118/432 (27%), Positives = 204/432 (47%), Gaps = 40/432 (9%)
Query: 2 ASKCSSERKSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEV 61
A K E++ R LTL +K+++ E+G S+ + + + T+ + K + L+
Sbjct: 7 AGKSRGEKRKRVVLTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFF 66
Query: 62 KSATPMNTRMIRKRNSL----IADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMK 117
S+ + + + +R +L + +++VL W + S +P+S ++ KA + M+
Sbjct: 67 ASSD--SNKALEQRRTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQ 124
Query: 118 AERGVEAAEEKFEASRGWFMRFKERSHFHNIKAQGEAASADVEAAASYPEALAKIIDEGG 177
E S GW RFK R + A E SAD +AA + + E G
Sbjct: 125 LT-------EPCVFSGGWLWRFKARHGIKKLDASSEKQSADHQAAEQFCAFFRSLAAEHG 177
Query: 178 YTKQQIFNVDETAFYWKKMPSRTFIAREEKSVPGFKASKDRLTLLLGANAAGDFKLKPML 237
+ +Q++N DET +W+ +P+ T E +VPG K KDRLT+L+ ANA G +LKP+
Sbjct: 178 LSAEQVYNADETGLFWRCLPNPT---PEGGAVPGPKQGKDRLTVLMCANATGSHRLKPLA 234
Query: 238 IYHSENPRALKNYTKSTLPVLYKWNSKARMTAHLFTAWFTEYFKPTVETYCSEKKIP--F 295
I PRA K LPV YK A + +F+ WF F P+V + +P
Sbjct: 235 IGKCSGPRAFKGI--QHLPVAYKAQGNAWVDKEIFSDWFHHIFVPSVREHFRTIGLPEDS 292
Query: 296 KILLLIDNAPSHPRALMEIYEEINVIFMPANTTSILQPMDQGVISTFKSYYLRNTFHKAL 355
K +LL+D++ +HP+ + + IF+PA+ S++QPM+QG+ + ++RN + +
Sbjct: 293 KAVLLLDSSRAHPQEAELVSSNVFTIFLPASVASLVQPMEQGI----RRDFMRNFINPPV 348
Query: 356 AAMDSDVSDGSGQSKLKTFWKGFTILDAIKNIRDSWEEVKLSTLTGVWKKLIPTLIDDYE 415
+ + DAI ++ +W V W+KL P++ +
Sbjct: 349 PLQGPHAR--------------YNMNDAIFSVACAWNAVPSHVFRRAWRKLWPSVA--FA 392
Query: 416 GFKTSVEEVSAD 427
+S EE+ A+
Sbjct: 393 EGSSSEEELEAE 404
>gi|117938295 jerky isoform b [Homo sapiens]
Length = 556
Score = 170 bits (431), Expect = 3e-42
Identities = 118/432 (27%), Positives = 204/432 (47%), Gaps = 40/432 (9%)
Query: 2 ASKCSSERKSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEV 61
A K E++ R LTL +K+++ E+G S+ + + + T+ + K + L+
Sbjct: 7 AGKSRGEKRKRVVLTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFF 66
Query: 62 KSATPMNTRMIRKRNSL----IADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMK 117
S+ + + + +R +L + +++VL W + S +P+S ++ KA + M+
Sbjct: 67 ASSD--SNKALEQRRTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDFYEQMQ 124
Query: 118 AERGVEAAEEKFEASRGWFMRFKERSHFHNIKAQGEAASADVEAAASYPEALAKIIDEGG 177
E S GW RFK R + A E SAD +AA + + E G
Sbjct: 125 LT-------EPCVFSGGWLWRFKARHGIKKLDASSEKQSADHQAAEQFCAFFRSLAAEHG 177
Query: 178 YTKQQIFNVDETAFYWKKMPSRTFIAREEKSVPGFKASKDRLTLLLGANAAGDFKLKPML 237
+ +Q++N DET +W+ +P+ T E +VPG K KDRLT+L+ ANA G +LKP+
Sbjct: 178 LSAEQVYNADETGLFWRCLPNPT---PEGGAVPGPKQGKDRLTVLMCANATGSHRLKPLA 234
Query: 238 IYHSENPRALKNYTKSTLPVLYKWNSKARMTAHLFTAWFTEYFKPTVETYCSEKKIP--F 295
I PRA K LPV YK A + +F+ WF F P+V + +P
Sbjct: 235 IGKCSGPRAFKGI--QHLPVAYKAQGNAWVDKEIFSDWFHHIFVPSVREHFRTIGLPEDS 292
Query: 296 KILLLIDNAPSHPRALMEIYEEINVIFMPANTTSILQPMDQGVISTFKSYYLRNTFHKAL 355
K +LL+D++ +HP+ + + IF+PA+ S++QPM+QG+ + ++RN + +
Sbjct: 293 KAVLLLDSSRAHPQEAELVSSNVFTIFLPASVASLVQPMEQGI----RRDFMRNFINPPV 348
Query: 356 AAMDSDVSDGSGQSKLKTFWKGFTILDAIKNIRDSWEEVKLSTLTGVWKKLIPTLIDDYE 415
+ + DAI ++ +W V W+KL P++ +
Sbjct: 349 PLQGPHAR--------------YNMNDAIFSVACAWNAVPSHVFRRAWRKLWPSVA--FA 392
Query: 416 GFKTSVEEVSAD 427
+S EE+ A+
Sbjct: 393 EGSSSEEELEAE 404
>gi|13569924 hypothetical protein LOC81789 [Homo sapiens]
Length = 521
Score = 160 bits (406), Expect = 2e-39
Identities = 117/403 (29%), Positives = 202/403 (50%), Gaps = 42/403 (10%)
Query: 10 KSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMNT 69
K R +L +K++++ + G K ++ + G+ T+S + + KF ++V+ A+ +
Sbjct: 7 KKRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVREAS-VGP 65
Query: 70 RMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGVEAAEEKF 129
+ R R++L D++K + W ++ ++NI ++ S+I+ KAL L N + + F
Sbjct: 66 QRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANML--------GYDNF 117
Query: 130 EASRGWFMRFKERSHFHNIKAQGEAASADVEAAASYPEA-------LAKIIDEGGYTKQQ 182
+AS GW RF++R H +KA S + + + K+I + Y+
Sbjct: 118 QASVGWLNRFRDR-HGIALKAVCREDSDRLMNGLGIDKINEWHAGEIIKLIAD--YSPDD 174
Query: 183 IFNVDETAFYWKKMPSRTFIAREEKSVPGFKASKDRLTLLLGANAAGDFKLKPMLIYHSE 242
IFN DET +++ +P T A+ + G KA K RLT L NA+G K++P+++ S
Sbjct: 175 IFNADETGVFFQLLPQHTLAAKGDHCRGGKKA-KQRLTALFCCNASGTEKMRPLIVGRSA 233
Query: 243 NPRALKNYTKSTLPVLYKWNSKARMTAHLFTAWFTEYFKPTVETYCSEKKIPFKILLLID 302
+P LKN +LP Y+ N A MT LF W ++ K+ +ILLLID
Sbjct: 234 SPHCLKNI--HSLPCDYRANQWAWMTRDLFNEWL-------MQVDARMKRAERRILLLID 284
Query: 303 NAPSHPRALMEIYEEINVIFMPANTTSILQPMDQGVISTFKSYYLRNTFHKALAAMDSDV 362
N +H ++ E I V ++P+N T++LQP++ G+I T K Y + + L ++S
Sbjct: 285 NCSAH--NMLPHLERIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNS-- 340
Query: 363 SDGSGQSKLKTFWKGFTILDAIKNIRDSWEEVKLSTLTGVWKK 405
S+ + +K AI I +W VK ST+ W+K
Sbjct: 341 SEDQEEVDIK---------QAIDMIAAAWWSVKPSTVVKCWQK 374
>gi|22219477 tigger transposable element derived 4 [Homo sapiens]
Length = 512
Score = 137 bits (345), Expect = 3e-32
Identities = 122/490 (24%), Positives = 226/490 (46%), Gaps = 57/490 (11%)
Query: 10 KSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMNT 69
K + SL++ +K+++I E G KAEI G+ + ++S ++ K+K L+ +S +
Sbjct: 16 KKKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLR-FDP 74
Query: 70 RMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGVEAAEEKF 129
+ R R + D+E+ L+ W N+P++ +++ KA N + G F
Sbjct: 75 KRKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKA----NDFAQKLG----HNDF 126
Query: 130 EASRGWFMRFKERSHFHNIKAQGEAASADVE-AAASYPEALAKIIDEGGYTKQQIFNVDE 188
+ S GW RFK R EA V+ + Y L +++ Y + +FN+ E
Sbjct: 127 KCSNGWLDRFKSRYGLVFRAQPVEATGVPVDPSTVWYQNVLPYYLND--YHPKNVFNIKE 184
Query: 189 TAFYWKKMPSRTFIAREEKSVPGFKASKDRLTLLLGANAAGDFKLKPMLIYHSENPRALK 248
T ++ +P+ TF + E G K KDR+TL++G N G KL ++I P K
Sbjct: 185 TGLLYRMLPTNTFAFKGETCSVG-KLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPHCFK 243
Query: 249 NYTKSTLPVLYKWNSKARMTAHLFTAWFTEYFKPTVETYCSEKKIPFKILLLIDNAPSHP 308
+LPV Y+ N A MT+ +F W + E + ++++ ++++ +++ P+HP
Sbjct: 244 GL--KSLPVCYEANRMAWMTSDVFEQW----MRKLDEEFQAQQR---RVVIFVESFPAHP 294
Query: 309 RALMEIYEEINVIFMPANTTSILQPMDQGVISTFKSYYLRNTFHKALAAMDSDVSDGSGQ 368
++ + I + F P+ +S M QGVI + K Y K L++++
Sbjct: 295 E--VKNLKSIELAFFPSCLSSKCIAMKQGVIKSLKIKYRHCLIKKFLSSVEGS------- 345
Query: 369 SKLKTFWKGFTILDAIKNIRDSWEEVKLSTLTGVWKKLIP-TLIDDYE--GFKTSVEEVS 425
K F F++LDA+ TL W+ + P T++ YE GFK+ E
Sbjct: 346 ---KEF--TFSLLDAV------------DTLHLCWRAVTPETIVKSYEEAGFKSQKGE-- 386
Query: 426 ADVVEIAKELELEVEPEDVTELLQSHDKTLTDEELFLMDAQRKWFLEMESTPGEDAVNIV 485
+D+ K+ L++ + + ++ + L+ EE +D + E+ P D++
Sbjct: 387 SDITNAEKDTGLDLVADALGAGVE-FPEGLSIEEYAALDDDLE---TCEAAPNGDSICTK 442
Query: 486 EMTTKDLEYY 495
E + + +Y
Sbjct: 443 ESKSDETGFY 452
>gi|144922631 tigger transposable element derived 5 [Homo sapiens]
Length = 593
Score = 123 bits (309), Expect = 4e-28
Identities = 119/504 (23%), Positives = 204/504 (40%), Gaps = 82/504 (16%)
Query: 12 RTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEK---FLKEVKSATPMN 68
R + ++ KL+ I+ + G +A + R G+ T+ + + K FL+++
Sbjct: 4 RKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVGTQ 63
Query: 69 TRMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGVEAAEEK 128
+ +R N ++++ + W +PLS LIQ +A R + E
Sbjct: 64 RKKMRLANE--EEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAF------ARQIYGPECT 115
Query: 129 FEASRGWFMRFKERSHFHNIKAQGEAA--------SADVEAAASYPEALAKIID------ 174
F+AS GWF R+++R + + GEA V+ + P + D
Sbjct: 116 FKASHGWFWRWQKRHGISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAGPLPDRAPAPP 175
Query: 175 ---EGGYTKQQIFNVDETAFYWKKMPSRTFIAREEKSVPGF-----KASKDRLTLLLGAN 226
EGGY +QI++ T YWK +P + A PG + DR+T+LL AN
Sbjct: 176 PPAEGGYGDEQIYSASVTGLYWKLLPEQA--APPGAGDPGAGGCGRRWRGDRVTVLLAAN 233
Query: 227 AAGDFKLKPMLIYHSENPRALKNYTKSTLPVLYKWNSKARMTAHLFTAWFTEYFKPTVET 286
G KLKP++I +P +L+++ + P Y+++ A ++ L WF E F P V+
Sbjct: 234 LTGSHKLKPLVIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKR 293
Query: 287 YCSEKKIPFKILLLIDNAP-SHPRALMEIYEE------------------------INVI 321
Y + K +LL+ + P P A M + + V+
Sbjct: 294 YLRRSCLQQKAVLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEELQTPDGAVRVL 353
Query: 322 FMP--ANTTSILQPMDQGVISTFKSYYLRNTFHKALAAMDSDVSDGSGQSKLKTFWKGFT 379
F+ ++ I P++QGV++ FK Y R A++ D F + F
Sbjct: 354 FLSKGSSRAHIPAPLEQGVVAAFKQLYKRELLRLAVSCASGSPLD---------FMRSFM 404
Query: 380 ILDAIKNIRDSWEEVKLSTLTGVW-----KKLIPTLIDDYEGFKTSVEE------VSADV 428
+ D + SW+ V+ ++ W P +D G EE V +D+
Sbjct: 405 LKDMLYLAGLSWDLVQAGSIERCWLLGLRAAFEPRPGEDSAGQPAQAEEAAEHSRVLSDL 464
Query: 429 VEIAKELELEVEPEDVTELLQSHD 452
+A + PE+V E L D
Sbjct: 465 THLAALAYKCLAPEEVAEWLHLDD 488
>gi|49619234 hypothetical protein LOC92806 [Homo sapiens]
Length = 187
Score = 105 bits (263), Expect = 9e-23
Identities = 63/181 (34%), Positives = 104/181 (57%), Gaps = 7/181 (3%)
Query: 2 ASKCSSERKSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEV 61
A+ S ++ R ++TL+ KLE+++ E G ++I + L L TV+ + ++KEK
Sbjct: 9 ATVIPSAKRERKAITLDLKLEVLRRFEAGEKLSQIAKALDLAISTVATIRDSKEKIKASS 68
Query: 62 KSATPMN-TRMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAER 120
+ ATP+ +R+ R R++++ ME++L +W+EDQ+ N LS +++Q KA F+ ++ E
Sbjct: 69 QIATPLRASRLTRHRSAVMESMEQLLSLWLEDQSQPNATLSAAIVQEKA--EFDDLQREH 126
Query: 121 GVEAAEEKFEASRGWFMRFKERSHFHNIKAQGEAASADVEAAASYPEALAKIIDEGGYTK 180
G + E+F AS+GW +RFKE + K A S Y E L II+EG YT
Sbjct: 127 GEGSQTERFHASQGWLVRFKECHCLPHFKMNSAAPS----NKDMYTEMLKSIIEEGEYTP 182
Query: 181 Q 181
Q
Sbjct: 183 Q 183
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 95.1 bits (235), Expect = 2e-19
Identities = 99/420 (23%), Positives = 174/420 (41%), Gaps = 64/420 (15%)
Query: 12 RTSLTLNQKLEMIKLSEEG--MSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMNT 69
R LT +K +I+ EE + K EI RR + T+S ++ K L + +T
Sbjct: 5 RRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVAST 64
Query: 70 RMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGVEAAEEKF 129
+ S +E +L+ W + + +P+ +++ KAL + E + F
Sbjct: 65 CRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRI--------AEELGMDDF 116
Query: 130 EASRGWFMRFKERSHFHNIKAQGEAASADVEAAA----SYPEALAKIIDEG--------- 176
AS GW RF+ R H + + A A AA + P + A + EG
Sbjct: 117 TASNGWLDRFRRR---HGVVSCSGVARARARNAAPRTPAAPASPAAVPSEGSGGSTTGWR 173
Query: 177 -----------GYTKQQIFNVDETAFYWKKMPSRTFIAREEKSVPGFKASKDRLTLLLGA 225
GY Q +F+ ET+ ++ +P + P + + RL++LL A
Sbjct: 174 AREEQPPSVAEGYASQDVFSATETSLWYDFLPDQAAGLCGGDGRP--RQATQRLSVLLCA 231
Query: 226 NAAGDFKLKPMLIYHSENPRALKNYTKSTLPVLYKWNSKARMTAHLFTAWFTEYFKPTVE 285
NA G KL P++ S PRA ++ LP Y NSK +T T +Y K
Sbjct: 232 NADGSEKLPPLVAGKSAKPRA----GQAGLPCDYTANSKGGVT----TQALAKYLKALDT 283
Query: 286 TYCSEKKIPFKILLLIDNAPSHPRALMEIYEEINVIFMPANTTSILQPMDQGVISTFKSY 345
+E + ++LLL + + + + F P T + P+++GV+ K +
Sbjct: 284 RMAAESR---RVLLLAGRLAAQSLDTSGL-RHVQLAFFPPGT---VHPLERGVVQQVKGH 336
Query: 346 YLRNTFHKALAAMDSDVSDGSGQSKLKTFWKGFTILDAIKNIRDSWEEVKLSTLTGVWKK 405
Y + KA+AA++ D SG + +A+ + +W+ V+ S + +++
Sbjct: 337 YRQAMLLKAMAALEG--QDPSGLQ--------LGLTEALHFVAAAWQAVEPSDIAACFRE 386
>gi|47059046 dachsous 2 isoform 1 [Homo sapiens]
Length = 2916
Score = 82.4 bits (202), Expect = 1e-15
Identities = 42/60 (70%), Positives = 45/60 (75%)
Query: 117 KAERGVEAAEEKFEASRGWFMRFKERSHFHNIKAQGEAASADVEAAASYPEALAKIIDEG 176
K ER EAAE+KFEASRGWFMRFK R H H +K Q EAASAD EAAA Y LAKI+ EG
Sbjct: 268 KVERDEEAAEKKFEASRGWFMRFKGRRHLHYLKVQDEAASADGEAAARYVANLAKILGEG 327
>gi|23312394 tigger transposable element derived 3 [Homo sapiens]
Length = 471
Score = 72.4 bits (176), Expect = 1e-12
Identities = 88/390 (22%), Positives = 167/390 (42%), Gaps = 44/390 (11%)
Query: 7 SERKSRTSLTLNQKLEMIKLSEEG-MSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSAT 65
S +K +L+L +K+++++L +E MS++E+ RR + + +S++ KEK L + S T
Sbjct: 4 SSKKKLHALSLAEKIQVLELLDESKMSQSEVARRFQVSQPQISRICKNKEKLLADWCSGT 63
Query: 66 PMNTRMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGVEAA 125
R RKR S + +++ L+ W ++ ++ ++ +KA L + M +
Sbjct: 64 ANRERK-RKRESKYSGIDEALLCWYHIARAKAWDVTGPMLLHKAKELADIMGQD------ 116
Query: 126 EEKFEASRGWFMRFKERSHFHNIKAQGEAASADVEAAASYPEALAKI-IDEGGYTKQQIF 184
F S GW +R+K R++ A S E + A++ + ++ + +F
Sbjct: 117 ---FVPSIGWLVRWKRRNNVGFGARHVLAPSFPPEPPPPGLTSQAQLPLSLKDFSPEDVF 173
Query: 185 NVDETAFYWKKMPSRTFIAREEKSVPGFKASKDRLTLLLGANAAGDFKLKPMLIYHSENP 244
E + ++VPG + D++ +LL AN+ G K + +L P
Sbjct: 174 GCAELPLLY-------------RAVPGSFGACDQVQVLLCANSRGTEKRRVLLGGLQAAP 220
Query: 245 RALKNYTKSTLPVLYKWNSKARMTAHLFTAWFTEYFKPTVETYCSEKKIPFKILLLIDNA 304
R LP Y + + W ++ + + +++ LLL
Sbjct: 221 RCFFGIRSEALPASYHPD-----LGIPWLEWLAQFDRDMGQ---QGRQV---ALLLAARV 269
Query: 305 PSHPRALMEIYEEINVIFMPANTTSILQPMDQGVISTFKSYYLRNTFHKALAAMDSDVSD 364
L +Y +V +P +S P+ V+ FK++Y K LAA+ S+ D
Sbjct: 270 VEELAGLPGLY---HVKLLPLAASSTTPPLPSSVVRAFKAHYRHRLLGK-LAAIQSE-RD 324
Query: 365 GSGQSKLKTFWKGFTILDAIKNIRDSWEEV 394
G + L G T+LDA+ +W +V
Sbjct: 325 G---TSLAEAGAGITVLDALHVASAAWAKV 351
>gi|239755627 PREDICTED: similar to cag [Homo sapiens]
Length = 392
Score = 62.4 bits (150), Expect = 1e-09
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 7 SERKSRTSLTLN--QKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSA 64
S++K R L L+ QK+++++ + G+S + G+ T+ + K+K LK +
Sbjct: 56 SDKKKRKHLCLSIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKFYAES 115
Query: 65 TPM----NTRMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAER 120
N + + K + D+++VL WI + S ++PL+ LI +A N +K E
Sbjct: 116 DEQILMKNRKTLHKAKN--EDLDRVLKEWIRQRRSEHMPLNGMLIMKQAKIYHNELKIEG 173
Query: 121 GVEAAEEKFEASRGWFMRFKERSHFHNIKAQGEAASADVEAAASY 165
E S GW +FK+R +K G ASA EA +
Sbjct: 174 NC-------EYSTGWLQKFKKRHGIKFLKTCGNKASAGHEATEKF 211
>gi|239750125 PREDICTED: hypothetical protein XP_002347296 [Homo
sapiens]
Length = 392
Score = 62.4 bits (150), Expect = 1e-09
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 7 SERKSRTSLTLN--QKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSA 64
S++K R L L+ QK+++++ + G+S + G+ T+ + K+K LK +
Sbjct: 56 SDKKKRKHLCLSIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKFYAES 115
Query: 65 TPM----NTRMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAER 120
N + + K + D+++VL WI + S ++PL+ LI +A N +K E
Sbjct: 116 DEQILMKNRKTLHKAKN--EDLDRVLKEWIRQRRSEHMPLNGMLIMKQAKIYHNELKIEG 173
Query: 121 GVEAAEEKFEASRGWFMRFKERSHFHNIKAQGEAASADVEAAASY 165
E S GW +FK+R +K G ASA EA +
Sbjct: 174 NC-------EYSTGWLQKFKKRHGIKFLKTCGNKASAGHEATEKF 211
>gi|239744433 PREDICTED: hypothetical protein XP_002343159 [Homo
sapiens]
Length = 392
Score = 62.4 bits (150), Expect = 1e-09
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 7 SERKSRTSLTLN--QKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSA 64
S++K R L L+ QK+++++ + G+S + G+ T+ + K+K LK +
Sbjct: 56 SDKKKRKHLCLSIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKFYAES 115
Query: 65 TPM----NTRMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAER 120
N + + K + D+++VL WI + S ++PL+ LI +A N +K E
Sbjct: 116 DEQILMKNRKTLHKAKN--EDLDRVLKEWIRQRRSEHMPLNGMLIMKQAKIYHNELKIEG 173
Query: 121 GVEAAEEKFEASRGWFMRFKERSHFHNIKAQGEAASADVEAAASY 165
E S GW +FK+R +K G ASA EA +
Sbjct: 174 NC-------EYSTGWLQKFKKRHGIKFLKTCGNKASAGHEATEKF 211
>gi|223005859 WD repeat domain 67 isoform 1 [Homo sapiens]
Length = 1066
Score = 34.3 bits (77), Expect = 0.33
Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 6/112 (5%)
Query: 158 DVEAAASYPEALAKIIDEGGYTKQQIFN--VDETAFYWKKMPSRTFIAREEKSVPGFKAS 215
D++ Y E +AK++ E + +I N V+E A WK+ + F R K +
Sbjct: 910 DLQRNKCYQE-VAKLLRENRRKEIEIINAMVEEEAKKWKEAEGKEFRLRSAKKASALSDA 968
Query: 216 KDRLTLLLGANAAGDFKLKPMLIYHSENPRALKNYTKSTLPVLYKWNSKARM 267
+ L NAA + P H E PR S LP + N + M
Sbjct: 969 SRKWFLKQEINAAVEHAENPC---HKEEPRFQNEQDSSCLPRTSQLNDSSEM 1017
>gi|239756639 PREDICTED: similar to hCG1802057 [Homo sapiens]
Length = 86
Score = 33.5 bits (75), Expect = 0.56
Identities = 19/84 (22%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 15 LTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMN---TRM 71
+ L +K+ ++ + GMS + +G L + T+ + +++ + V+ A P + T +
Sbjct: 1 MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI 60
Query: 72 IR-KRNSLIADMEKVLVVWIEDQT 94
+R + + + MEK L +WI + +
Sbjct: 61 VRDEAMTKMEKMEKRLNLWIHEMS 84
>gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1363
Score = 33.5 bits (75), Expect = 0.56
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 14 SLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMNTRMIR 73
S+ LN+++ K+++ ++ L + + + KE+ EV+S I
Sbjct: 480 SVRLNEEMITKKVAQYSQQLNDLKAENARLNSKLEKEKHNKERLEAEVESLHSNLATAIN 539
Query: 74 KRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGVEAAEEKFEASR 133
+ N ++ + LV+W D SR+ + ++ Q LT N + E+ V A KF +
Sbjct: 540 EYNEILERKDLELVLWRADDVSRHETMGSNISQ---LTDKNELLTEQ-VHKARVKFNTLK 595
Query: 134 G 134
G
Sbjct: 596 G 596
>gi|239751125 PREDICTED: hypothetical protein XP_002347719 [Homo
sapiens]
Length = 86
Score = 33.5 bits (75), Expect = 0.56
Identities = 19/84 (22%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 15 LTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMN---TRM 71
+ L +K+ ++ + GMS + +G L + T+ + +++ + V+ A P + T +
Sbjct: 1 MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI 60
Query: 72 IR-KRNSLIADMEKVLVVWIEDQT 94
+R + + + MEK L +WI + +
Sbjct: 61 VRDEAMTKMEKMEKRLNLWIHEMS 84
>gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1366
Score = 33.5 bits (75), Expect = 0.56
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 14 SLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMNTRMIR 73
S+ LN+++ K+++ ++ L + + + KE+ EV+S I
Sbjct: 509 SVRLNEEMITKKVAQYSQQLNDLKAENARLNSKLEKEKHNKERLEAEVESLHSNLATAIN 568
Query: 74 KRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGVEAAEEKFEASR 133
+ N ++ + LV+W D SR+ + ++ Q LT N + E+ V A KF +
Sbjct: 569 EYNEILERKDLELVLWRADDVSRHETMGSNISQ---LTDKNELLTEQ-VHKARVKFNTLK 624
Query: 134 G 134
G
Sbjct: 625 G 625
>gi|239745616 PREDICTED: hypothetical protein XP_002344143 [Homo
sapiens]
Length = 86
Score = 33.5 bits (75), Expect = 0.56
Identities = 19/84 (22%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 15 LTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMN---TRM 71
+ L +K+ ++ + GMS + +G L + T+ + +++ + V+ A P + T +
Sbjct: 1 MCLTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAAPDSAEVTSI 60
Query: 72 IR-KRNSLIADMEKVLVVWIEDQT 94
+R + + + MEK L +WI + +
Sbjct: 61 VRDEAMTKMEKMEKRLNLWIHEMS 84
>gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1139
Score = 33.5 bits (75), Expect = 0.56
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 14 SLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMNTRMIR 73
S+ LN+++ K+++ ++ L + + + KE+ EV+S I
Sbjct: 509 SVRLNEEMITKKVAQYSQQLNDLKAENARLNSKLEKEKHNKERLEAEVESLHSNLATAIN 568
Query: 74 KRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGVEAAEEKFEASR 133
+ N ++ + LV+W D SR+ + ++ Q LT N + E+ V A KF +
Sbjct: 569 EYNEILERKDLELVLWRADDVSRHETMGSNISQ---LTDKNELLTEQ-VHKARVKFNTLK 624
Query: 134 G 134
G
Sbjct: 625 G 625
>gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 32.7 bits (73), Expect = 0.96
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 14 SLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMNTRMIR 73
S+ LN+K+ ++ ++ L + + + KE+ EV+S I
Sbjct: 479 SVRLNEKMITKTVARYSQQLNDLKAENARLNSELEKEKHNKERLEAEVESLHSSLATAIN 538
Query: 74 KRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGVEAAEEKFEASR 133
+ N ++ + LV+W D SR+ + ++ Q LT N + E+ V A KF +
Sbjct: 539 EYNEIVERKDLELVLWRADDVSRHEKMGSNISQ---LTDKNELLTEQ-VHKARVKFNTLK 594
Query: 134 G 134
G
Sbjct: 595 G 595
>gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1002
Score = 32.7 bits (73), Expect = 0.96
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 14 SLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMNTRMIR 73
S+ LN+K+ ++ ++ L + + + KE+ EV+S I
Sbjct: 372 SVRLNEKMITKTVARYSQQLNDLKAENARLNSELEKEKHNKERLEAEVESLHSSLATAIN 431
Query: 74 KRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGVEAAEEKFEASR 133
+ N ++ + LV+W D SR+ + ++ Q LT N + E+ V A KF +
Sbjct: 432 EYNEIVERKDLELVLWRADDVSRHEKMGSNISQ---LTDKNELLTEQ-VHKARVKFNTLK 487
Query: 134 G 134
G
Sbjct: 488 G 488
>gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 32.7 bits (73), Expect = 0.96
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 14 SLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSATPMNTRMIR 73
S+ LN+K+ ++ ++ L + + + KE+ EV+S I
Sbjct: 479 SVRLNEKMITKTVARYSQQLNDLKAENARLNSELEKEKHNKERLEAEVESLHSSLATAIN 538
Query: 74 KRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGVEAAEEKFEASR 133
+ N ++ + LV+W D SR+ + ++ Q LT N + E+ V A KF +
Sbjct: 539 EYNEIVERKDLELVLWRADDVSRHEKMGSNISQ---LTDKNELLTEQ-VHKARVKFNTLK 594
Query: 134 G 134
G
Sbjct: 595 G 595
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 32.7 bits (73), Expect = 0.96
Identities = 38/170 (22%), Positives = 70/170 (41%), Gaps = 22/170 (12%)
Query: 4 KCSSERKSRTSLTLNQKLEMIK--LSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEV 61
+C + SR Q LE ++ L EE +K+ + + LR + +E+ +E
Sbjct: 1344 ECLISQLSRGKALAAQSLEELRRQLEEESKAKSALAHAVQALRHDCDLL---REQHEEEA 1400
Query: 62 KSATPMNTRMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERG 121
++ + R++ K N+ +A W + I ++ L + K +AE G
Sbjct: 1401 EAQAELQ-RLLSKANAEVAQ-------WRSKYEADAIQRTEELEEAKKKLALRLQEAEEG 1452
Query: 122 VEAAEEKFEASRGWFMRFKERSHFHNIKAQGEAASADVEAAASYPEALAK 171
VEAA K + +R ++ + E + ++E A S AL K
Sbjct: 1453 VEAANAKCSSLEKAKLR---------LQTESEDVTLELERATSAAAALDK 1493
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 32.3 bits (72), Expect = 1.3
Identities = 39/203 (19%), Positives = 85/203 (41%), Gaps = 38/203 (18%)
Query: 349 NTFHKALAAMDSDVSD----GSGQSK------LKTFWKGFTILDAIKNIRDSWEEVKLST 398
N+FH+ + A++ S G+ SK + T W+ +T L A+ ++
Sbjct: 5082 NSFHEKIVALEEKASQLEKTGNDASKATLSRSMTTVWQRWTRLRAVAQDQE--------- 5132
Query: 399 LTGVWKKLIPTLIDDYEGFKTSVEEVSADVVEIAKEL----ELEVEPEDVTELLQSHDKT 454
K++ +D++ GF V++ + + ++ +L + ++ LL+ HD
Sbjct: 5133 ------KILEDAVDEWTGFNNKVKKATEMIDQLQDKLPGSSAEKASKAELLTLLEYHDTF 5186
Query: 455 LTDEE-----LFLMDAQRKWFLE--MESTPGEDAVNIVEMTTKDLEYYINLVDKAAAGFE 507
+ + E L ++ Q L+ TPGE+ + E+T + +N+ +K +
Sbjct: 5187 VLELEQQQSALGMLRQQTLSMLQDGAAPTPGEEPPLMQEITAMQ-DRCLNMQEKVKTNGK 5245
Query: 508 RIDSNFERSSTVGKMLSNSIACY 530
+ + V + NS+ C+
Sbjct: 5246 LVKQELKDREMVETQI-NSVKCW 5267
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 32.3 bits (72), Expect = 1.3
Identities = 39/203 (19%), Positives = 85/203 (41%), Gaps = 38/203 (18%)
Query: 349 NTFHKALAAMDSDVSD----GSGQSK------LKTFWKGFTILDAIKNIRDSWEEVKLST 398
N+FH+ + A++ S G+ SK + T W+ +T L A+ ++
Sbjct: 5153 NSFHEKIVALEEKASQLEKTGNDASKATLSRSMTTVWQRWTRLRAVAQDQE--------- 5203
Query: 399 LTGVWKKLIPTLIDDYEGFKTSVEEVSADVVEIAKEL----ELEVEPEDVTELLQSHDKT 454
K++ +D++ GF V++ + + ++ +L + ++ LL+ HD
Sbjct: 5204 ------KILEDAVDEWTGFNNKVKKATEMIDQLQDKLPGSSAEKASKAELLTLLEYHDTF 5257
Query: 455 LTDEE-----LFLMDAQRKWFLE--MESTPGEDAVNIVEMTTKDLEYYINLVDKAAAGFE 507
+ + E L ++ Q L+ TPGE+ + E+T + +N+ +K +
Sbjct: 5258 VLELEQQQSALGMLRQQTLSMLQDGAAPTPGEEPPLMQEITAMQ-DRCLNMQEKVKTNGK 5316
Query: 508 RIDSNFERSSTVGKMLSNSIACY 530
+ + V + NS+ C+
Sbjct: 5317 LVKQELKDREMVETQI-NSVKCW 5338
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.129 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,362,524
Number of Sequences: 37866
Number of extensions: 877412
Number of successful extensions: 4360
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 4260
Number of HSP's gapped (non-prelim): 105
length of query: 591
length of database: 18,247,518
effective HSP length: 108
effective length of query: 483
effective length of database: 14,157,990
effective search space: 6838309170
effective search space used: 6838309170
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.