Guide to the Human Genome
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Name: ANKRD18B Sequence: fasta or formatted (1139aa) NCBI GI: 239743705
Description:

PREDICTED: ankyrin repeat domain 18B

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [1366aa] PREDICTED: ankyrin repeat domain 18B
alt prot [1363aa] PREDICTED: ankyrin repeat domain 18B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         85           4
 C cysteine            1.6         18           2
 D aspartate           4.6         52           2
 E glutamate          11.2        128           3
 F phenylalanine       2.3         26           1
 G glycine             3.2         37           2
 H histidine           2.9         33           2
 I isoleucine          4.7         54           2
 K lysine             10.6        121           3
 L leucine            11.9        136           3
 M methionine          2.8         32           1
 N asparagine          5.9         67           2
 P proline             2.8         32           1
 Q glutamine           4.8         55           3
 R arginine            6.8         77           2
 S serine              6.0         68           2
 T threonine           3.7         42           2
 V valine              4.0         46           2
 W tryptophan          0.5          6           1
 Y tyrosine            2.1         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              1.000   PREDICTED: ankyrin repeat domain 18B 
ANKRD18B              0.968   PREDICTED: ankyrin repeat domain 18B 
ANKRD18A              0.858   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.858   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.824   PREDICTED: ankyrin repeat domain 18A 
ANKRD26               0.239   ankyrin repeat domain 26 
ANKRD20A2             0.159   ankyrin repeat domain 20 family, member A2 
ANKRD20A3             0.159   ankyrin repeat domain 20 family, member A3 
ANKRD20A1             0.159   ankyrin repeat domain 20 family, member A1 
ANKRD20A4             0.159   ankyrin repeat domain 20 family, member A4 
ANKRD20A5             0.150   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD20A5             0.150   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD62               0.117   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.117   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
ANKRD62               0.116   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
CCDC144A              0.102   coiled-coil domain containing 144A 
POTEA                 0.102   POTE ankyrin domain family, member A isoform 2 [Homo...
LOC100287399          0.101   PREDICTED: hypothetical protein XP_002343353 
POTEB                 0.100   protein expressed in prostate, ovary, testis, and pl...
POTEH                 0.098   ANKRD26-like family C, member 3 
POTEG                 0.098   POTE ankyrin domain family, member G 
P704P                 0.098   prostate-specific P704P 
LOC653781             0.098   PREDICTED: similar to protein expressed in prostate...
LOC100132733          0.097   PREDICTED: similar to FLJ00310 protein 
POTEE                 0.097   protein expressed in prostate, ovary, testis, and p...
POTEF                 0.097   prostate, ovary, testis expressed protein on chromo...
POTED                 0.097   pote protein 
ANKRD36               0.097   PREDICTED: ankyrin repeat domain 36 
LOC653269             0.097   PREDICTED: similar to protein expressed in prostate...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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