Guide to the Human Genome
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Search of human proteins with 221316729

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|221316729 EF-hand calcium binding domain 2 isoform b [Homo
sapiens]
         (133 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|221316729 EF-hand calcium binding domain 2 isoform b [Homo sa...   267   2e-72
gi|14150108 EF-hand calcium binding domain 2 isoform a [Homo sap...   249   5e-67
gi|58218968 calmodulin 3 [Homo sapiens]                                73   8e-14
gi|4502549 calmodulin 2 [Homo sapiens]                                 73   8e-14
gi|5901912 calmodulin 1 [Homo sapiens]                                 73   8e-14
gi|4885111 calmodulin-like 3 [Homo sapiens]                            70   6e-13
gi|4507617 fast skeletal muscle troponin C [Homo sapiens]              67   5e-12
gi|4757902 caltractin [Homo sapiens]                                   64   5e-11
gi|4757974 centrin 1 [Homo sapiens]                                    62   2e-10
gi|46397403 centrin 3 [Homo sapiens]                                   55   1e-08
gi|4507615 troponin C, slow [Homo sapiens]                             50   4e-07
gi|11067753 calcium binding protein 5 [Homo sapiens]                   50   4e-07
gi|32698884 calcium binding protein 7 [Homo sapiens]                   50   7e-07
gi|17986273 fast skeletal myosin alkali light chain 1 isoform 1f...    50   7e-07
gi|223278387 calmodulin-like 5 [Homo sapiens]                          49   1e-06
gi|13929432 calcium binding protein 1 isoform 1 [Homo sapiens]         49   1e-06
gi|17986275 fast skeletal myosin alkali light chain 1 isoform 3f...    49   1e-06
gi|29568111 myosin regulatory light chain 9 isoform a [Homo sapi...    48   2e-06
gi|50897266 calmodulin-like 6 [Homo sapiens]                           48   2e-06
gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens]        48   2e-06
gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]         48   3e-06
gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens]         48   3e-06
gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens]        47   3e-06
gi|4505303 smooth muscle and non-muscle myosin alkali light chai...    47   4e-06
gi|21624641 calcium binding protein 4 [Homo sapiens]                   45   1e-05
gi|63054822 calneuron 1 isoform 2 [Homo sapiens]                       44   3e-05
gi|157743275 calneuron 1 isoform 1 [Homo sapiens]                      44   3e-05
gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo...    44   4e-05
gi|222144328 myosin regulatory light chain MRCL2 isoform B [Homo...    44   4e-05
gi|222144324 myosin regulatory light chain MRCL2 isoform A [Homo...    44   4e-05

>gi|221316729 EF-hand calcium binding domain 2 isoform b [Homo
           sapiens]
          Length = 133

 Score =  267 bits (683), Expect = 2e-72
 Identities = 133/133 (100%), Positives = 133/133 (100%)

Query: 1   MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA 60
           MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA
Sbjct: 1   MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA 60

Query: 61  EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY 120
           EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY
Sbjct: 61  EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY 120

Query: 121 MTEEDGVSLRRPG 133
           MTEEDGVSLRRPG
Sbjct: 121 MTEEDGVSLRRPG 133


>gi|14150108 EF-hand calcium binding domain 2 isoform a [Homo
           sapiens]
          Length = 162

 Score =  249 bits (636), Expect = 5e-67
 Identities = 124/124 (100%), Positives = 124/124 (100%)

Query: 1   MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA 60
           MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA
Sbjct: 1   MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA 60

Query: 61  EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY 120
           EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY
Sbjct: 61  EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY 120

Query: 121 MTEE 124
           MTEE
Sbjct: 121 MTEE 124


>gi|58218968 calmodulin 3 [Homo sapiens]
          Length = 149

 Score = 72.8 bits (177), Expect = 8e-14
 Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 11/122 (9%)

Query: 1   MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA 60
           MAD+   E+I  AEF    KEAF +FD + + T+  +E+GT++RSLG  PTE EL D+I 
Sbjct: 1   MADQLTEEQI--AEF----KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMIN 54

Query: 61  EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY 120
           EV + +  G I F +FL +M   + +       E+ +  AF V D    G+++  EL   
Sbjct: 55  EV-DADGNGTIDFPEFLTMMARKMKDTD----SEEEIREAFRVFDKDGNGYISAAELRHV 109

Query: 121 MT 122
           MT
Sbjct: 110 MT 111



 Score = 41.2 bits (95), Expect = 2e-04
 Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 17  KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
           ++I+EAF VFD + N  +   E+  ++ +LG   T+ E+ ++I E  + +  G + +E+F
Sbjct: 84  EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA-DIDGDGQVNYEEF 142

Query: 77  LPVMT 81
           + +MT
Sbjct: 143 VQMMT 147


>gi|4502549 calmodulin 2 [Homo sapiens]
          Length = 149

 Score = 72.8 bits (177), Expect = 8e-14
 Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 11/122 (9%)

Query: 1   MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA 60
           MAD+   E+I  AEF    KEAF +FD + + T+  +E+GT++RSLG  PTE EL D+I 
Sbjct: 1   MADQLTEEQI--AEF----KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMIN 54

Query: 61  EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY 120
           EV + +  G I F +FL +M   + +       E+ +  AF V D    G+++  EL   
Sbjct: 55  EV-DADGNGTIDFPEFLTMMARKMKDTD----SEEEIREAFRVFDKDGNGYISAAELRHV 109

Query: 121 MT 122
           MT
Sbjct: 110 MT 111



 Score = 41.2 bits (95), Expect = 2e-04
 Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 17  KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
           ++I+EAF VFD + N  +   E+  ++ +LG   T+ E+ ++I E  + +  G + +E+F
Sbjct: 84  EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA-DIDGDGQVNYEEF 142

Query: 77  LPVMT 81
           + +MT
Sbjct: 143 VQMMT 147


>gi|5901912 calmodulin 1 [Homo sapiens]
          Length = 149

 Score = 72.8 bits (177), Expect = 8e-14
 Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 11/122 (9%)

Query: 1   MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA 60
           MAD+   E+I  AEF    KEAF +FD + + T+  +E+GT++RSLG  PTE EL D+I 
Sbjct: 1   MADQLTEEQI--AEF----KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMIN 54

Query: 61  EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY 120
           EV + +  G I F +FL +M   + +       E+ +  AF V D    G+++  EL   
Sbjct: 55  EV-DADGNGTIDFPEFLTMMARKMKDTD----SEEEIREAFRVFDKDGNGYISAAELRHV 109

Query: 121 MT 122
           MT
Sbjct: 110 MT 111



 Score = 41.2 bits (95), Expect = 2e-04
 Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 17  KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
           ++I+EAF VFD + N  +   E+  ++ +LG   T+ E+ ++I E  + +  G + +E+F
Sbjct: 84  EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA-DIDGDGQVNYEEF 142

Query: 77  LPVMT 81
           + +MT
Sbjct: 143 VQMMT 147


>gi|4885111 calmodulin-like 3 [Homo sapiens]
          Length = 149

 Score = 69.7 bits (169), Expect = 6e-13
 Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 11/122 (9%)

Query: 1   MADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIA 60
           MAD+   E+  V EF    KEAF +FD + +  +  RE+GT++RSLG  PTE EL D+++
Sbjct: 1   MADQLTEEQ--VTEF----KEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMS 54

Query: 61  EVEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKY 120
           E+ + +  G + F +FL +M   + +       E+ +  AF V D    GF++  EL   
Sbjct: 55  EI-DRDGNGTVDFPEFLGMMARKMKDTD----NEEEIREAFRVFDKDGNGFVSAAELRHV 109

Query: 121 MT 122
           MT
Sbjct: 110 MT 111



 Score = 35.8 bits (81), Expect = 0.010
 Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 17  KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
           ++I+EAF VFD + N  V   E+  ++  LG   ++ E+ ++I    + +  G + +E+F
Sbjct: 84  EEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMI-RAADTDGDGQVNYEEF 142

Query: 77  LPVM 80
           + V+
Sbjct: 143 VRVL 146


>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
          Length = 160

 Score = 66.6 bits (161), Expect = 5e-12
 Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 13/132 (9%)

Query: 9   EIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPT 68
           E ++AEF    K AF++FD +    + V+E+GT++R LG  PT+ EL  +I EV +E+ +
Sbjct: 14  EEMIAEF----KAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEV-DEDGS 68

Query: 69  GYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELI-------KYM 121
           G I FE+FL +M   + E   +   E+ L   F + D    G++  +EL        +++
Sbjct: 69  GTIDFEEFLVMMVRQMKE-DAKGKSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHV 127

Query: 122 TEEDGVSLRRPG 133
           T+E+  SL + G
Sbjct: 128 TDEEIESLMKDG 139


>gi|4757902 caltractin [Homo sapiens]
          Length = 172

 Score = 63.5 bits (153), Expect = 5e-11
 Identities = 38/119 (31%), Positives = 73/119 (61%), Gaps = 6/119 (5%)

Query: 11  IVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGY 70
           +  E  ++I+EAF++FD +   T+DV+E+   +R+LG  P + E+  +I+E+ ++E TG 
Sbjct: 25  LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEI-DKEGTGK 83

Query: 71  IRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEDGVSL 129
           + F  FL VMT+ + E+      ++ +L+AF++ D  + G ++   L K + +E G +L
Sbjct: 84  MNFGDFLTVMTQKMSEKD----TKEEILKAFKLFDDDETGKISFKNL-KRVAKELGENL 137



 Score = 33.1 bits (74), Expect = 0.067
 Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 9/82 (10%)

Query: 4   EKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVE 63
           EKD +E        +I +AF++FD +    +  + +  + + LG   T+ EL ++I E  
Sbjct: 99  EKDTKE--------EILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEA- 149

Query: 64  EEEPTGYIRFEKFLPVMTEILL 85
           + +  G +  ++FL +M +  L
Sbjct: 150 DRDGDGEVSEQEFLRIMKKTSL 171


>gi|4757974 centrin 1 [Homo sapiens]
          Length = 172

 Score = 61.6 bits (148), Expect = 2e-10
 Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 5/107 (4%)

Query: 17  KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
           ++++EAF++FD + + T+D +E+   +R+LG  P + E+  +I+EV + E TG I F  F
Sbjct: 31  QEVREAFDLFDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISEV-DREGTGKISFNDF 89

Query: 77  LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTE 123
           L VMT+ + E+      ++ +L+AF + D  + G ++   L +   E
Sbjct: 90  LAVMTQKMSEKD----TKEEILKAFRLFDDDETGKISFKNLKRVANE 132



 Score = 33.5 bits (75), Expect = 0.051
 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 9/82 (10%)

Query: 4   EKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVE 63
           EKD +E        +I +AF +FD +    +  + +  +   LG   T+ EL ++I E  
Sbjct: 99  EKDTKE--------EILKAFRLFDDDETGKISFKNLKRVANELGENLTDEELQEMIDEA- 149

Query: 64  EEEPTGYIRFEKFLPVMTEILL 85
           + +  G +  E+FL +M +  L
Sbjct: 150 DRDGDGEVNEEEFLRIMKKTSL 171


>gi|46397403 centrin 3 [Homo sapiens]
          Length = 167

 Score = 55.5 bits (132), Expect = 1e-08
 Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 5   KDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEE 64
           K R E+   E  ++IK+AFE+FD + +  +D  E+   +R+LG    + ++  ++ +  +
Sbjct: 17  KKRRELS-EEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDY-D 74

Query: 65  EEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTE 123
            E TG I FE F  V+T+ +LER     P + +L+AF++ D    G ++   L +   E
Sbjct: 75  REATGKITFEDFNEVVTDWILERD----PHEEILKAFKLFDDDDSGKISLRNLRRVARE 129



 Score = 40.4 bits (93), Expect = 4e-04
 Identities = 21/72 (29%), Positives = 43/72 (59%), Gaps = 1/72 (1%)

Query: 10  IIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTG 69
           I+  + H++I +AF++FD + +  + +R +  + R LG   ++ EL  +I E  +++  G
Sbjct: 94  ILERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELRAMIEEF-DKDGDG 152

Query: 70  YIRFEKFLPVMT 81
            I  E+F+ +MT
Sbjct: 153 EINQEEFIAIMT 164


>gi|4507615 troponin C, slow [Homo sapiens]
          Length = 161

 Score = 50.4 bits (119), Expect = 4e-07
 Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 4/122 (3%)

Query: 9   EIIVAEFHKKIKEAFEVFD-HESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEP 67
           E +  E   + K AF++F     +  +  +E+G ++R LG  PT  EL ++I EV +E+ 
Sbjct: 10  EQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEV-DEDG 68

Query: 68  TGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEEDGV 127
           +G + F++FL +M   + +   +   E+ L   F + D    G++  DEL K M +  G 
Sbjct: 69  SGTVDFDEFLVMMVRCMKDDS-KGKSEEELSDLFRMFDKNADGYIDLDEL-KIMLQATGE 126

Query: 128 SL 129
           ++
Sbjct: 127 TI 128


>gi|11067753 calcium binding protein 5 [Homo sapiens]
          Length = 173

 Score = 50.4 bits (119), Expect = 4e-07
 Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 1/118 (0%)

Query: 4   EKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVE 63
           EK RE  +  +  ++++EAF  FD + +  +  +++G ++R++G  PTE EL +L  ++ 
Sbjct: 18  EKQRERPLGQDEIEELREAFLEFDKDRDGFISCKDLGNLMRTMGYMPTEMELIELGQQI- 76

Query: 64  EEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYM 121
                G + F+ F+ +MT  LL      I    +  AF+  D+   G +T  EL + M
Sbjct: 77  RMNLGGRVDFDDFVELMTPKLLAETAGMIGVQEMRDAFKEFDTNGDGEITLVELQQAM 134


>gi|32698884 calcium binding protein 7 [Homo sapiens]
          Length = 215

 Score = 49.7 bits (117), Expect = 7e-07
 Identities = 24/64 (37%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 17 KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
          ++I+EAF+VFD + N  +  +E+GT +RSLG  P E EL  +I  + + +  G + FE+F
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRL-DMDGDGQVDFEEF 94

Query: 77 LPVM 80
          + ++
Sbjct: 95 VTLL 98



 Score = 26.9 bits (58), Expect = 4.8
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)

Query: 83  ILLERKYRPIPEDVL---LRAFEVLDSAKRGFLTKDEL 117
           +L E++   IPED L     AF+V D    GF++K EL
Sbjct: 21  LLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQEL 58


>gi|17986273 fast skeletal myosin alkali light chain 1 isoform 1f
           [Homo sapiens]
          Length = 194

 Score = 49.7 bits (117), Expect = 7e-07
 Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 7/120 (5%)

Query: 3   DEKDREEIIVAEFHKK----IKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDL 58
           +EK     I  EF K+     KEAF +FD   ++ + + ++G ++R+LG  PT  E+  +
Sbjct: 35  EEKIDLSAIKIEFSKEQQDEFKEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKV 94

Query: 59  IAEVEEEEPTG-YIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDEL 117
           +     EE     I FE+FLP+M + +   K +   ED  +    V D    G +   EL
Sbjct: 95  LGNPSNEELNAKKIEFEQFLPMM-QAISNNKDQATYED-FVEGLRVFDKEGNGTVMGAEL 152



 Score = 32.3 bits (72), Expect = 0.11
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 21  EAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKFL 77
           E   VFD E N TV   E+  ++ +LG    E E+  L+A   +E+  G I +E F+
Sbjct: 134 EGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVEALMA--GQEDSNGCINYEAFV 188


>gi|223278387 calmodulin-like 5 [Homo sapiens]
          Length = 146

 Score = 48.9 bits (115), Expect = 1e-06
 Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 8/111 (7%)

Query: 11  IVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGY 70
           +  E   + K+AF   D + N T++ +E+G  +++ G   +E +L  LI+EV + +  G 
Sbjct: 5   LTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEV-DSDGDGE 63

Query: 71  IRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYM 121
           I F++FL         +K R   ED+ + AF   D    G +T DEL + M
Sbjct: 64  ISFQEFLTA------AKKARAGLEDLQV-AFRAFDQDGDGHITVDELRRAM 107


>gi|13929432 calcium binding protein 1 isoform 1 [Homo sapiens]
          Length = 227

 Score = 48.9 bits (115), Expect = 1e-06
 Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 1/120 (0%)

Query: 2   ADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAE 61
           A+ +  +  +  E  ++++EAF  FD + +  ++ R++G  +R++G  PTE EL +L  +
Sbjct: 70  AENRQPDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQ 129

Query: 62  VEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYM 121
           +      G++ F+ F+ +M   LL      I    L  AF   D+   G ++  EL + M
Sbjct: 130 I-NMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAM 188


>gi|17986275 fast skeletal myosin alkali light chain 1 isoform 3f
           [Homo sapiens]
          Length = 150

 Score = 48.9 bits (115), Expect = 1e-06
 Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 7/107 (6%)

Query: 12  VAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTG-Y 70
           +AEF    KEAF +FD   ++ + + ++G ++R+LG  PT  E+  ++     EE     
Sbjct: 8   IAEF----KEAFLLFDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKK 63

Query: 71  IRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDEL 117
           I FE+FLP+M + +   K +   ED  +    V D    G +   EL
Sbjct: 64  IEFEQFLPMM-QAISNNKDQATYED-FVEGLRVFDKEGNGTVMGAEL 108



 Score = 32.3 bits (72), Expect = 0.11
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 21  EAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKFL 77
           E   VFD E N TV   E+  ++ +LG    E E+  L+A   +E+  G I +E F+
Sbjct: 90  EGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVEALMA--GQEDSNGCINYEAFV 144


>gi|29568111 myosin regulatory light chain 9 isoform a [Homo
           sapiens]
          Length = 172

 Score = 48.1 bits (113), Expect = 2e-06
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 9/106 (8%)

Query: 17  KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
           ++ KEAF + D   +  +D  ++  ++ SLG  PT+  L  +++E       G I F  F
Sbjct: 32  QEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEYLEGMMSEA-----PGPINFTMF 86

Query: 77  LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMT 122
           L +  E L        PEDV+  AF   D    GF+ +D L + +T
Sbjct: 87  LTMFGEKLNGTD----PEDVIRNAFACFDEEASGFIHEDHLRELLT 128


>gi|50897266 calmodulin-like 6 [Homo sapiens]
          Length = 181

 Score = 48.1 bits (113), Expect = 2e-06
 Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 5/124 (4%)

Query: 6   DREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEE 65
           D  E + AE  K+ K  FE+FD E N  V   E+  ++  LG  PT+ EL  +  +V+ +
Sbjct: 25  DMTERLSAEQIKEYKGVFEMFDEEGNGEVKTGELEWLMSLLGINPTKSELASMAKDVDRD 84

Query: 66  EPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMTEED 125
              G+   + FL +M    +  +     E  L  AF V D   +G++  + L KY+    
Sbjct: 85  N-KGFFNCDGFLALMG---VYHEKAQNQESELRAAFRVFDKEGKGYIDWNTL-KYVLMNA 139

Query: 126 GVSL 129
           G  L
Sbjct: 140 GEPL 143


>gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens]
          Length = 163

 Score = 48.1 bits (113), Expect = 2e-06
 Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 6/113 (5%)

Query: 5   KDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEE 64
           KDRE  +  E  ++++ AF+ FD + +  +  RE+G  +R+LG  PTE EL     E+ +
Sbjct: 14  KDRE--LRPEEIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYMPTEMEL----IEISQ 67

Query: 65  EEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDEL 117
           +   G + FE F+ +M   LL      I    L  AF   D+   G ++  EL
Sbjct: 68  QISGGKVDFEDFVELMGPKLLAETADMIGVRELRDAFREFDTNGDGRISVGEL 120


>gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]
          Length = 370

 Score = 47.8 bits (112), Expect = 3e-06
 Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 1/105 (0%)

Query: 17  KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
           ++++EAF  FD + +  ++ R++G  +R++G  PTE EL +L  ++      G++ F+ F
Sbjct: 228 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQI-NMNLGGHVDFDDF 286

Query: 77  LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYM 121
           + +M   LL      I    L  AF   D+   G ++  EL + M
Sbjct: 287 VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAM 331


>gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens]
          Length = 167

 Score = 47.8 bits (112), Expect = 3e-06
 Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 1/105 (0%)

Query: 17  KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
           ++++EAF  FD + +  ++ R++G  +R++G  PTE EL +L  ++      G++ F+ F
Sbjct: 25  EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQI-NMNLGGHVDFDDF 83

Query: 77  LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYM 121
           + +M   LL      I    L  AF   D+   G ++  EL + M
Sbjct: 84  VELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAM 128


>gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens]
          Length = 220

 Score = 47.4 bits (111), Expect = 3e-06
 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 6/116 (5%)

Query: 2   ADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAE 61
           A + DRE  +  E  ++++ AF+ FD + +  +  RE+G  +R+LG  PTE EL     E
Sbjct: 68  ATQLDRE--LRPEEIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYMPTEMEL----IE 121

Query: 62  VEEEEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDEL 117
           + ++   G + FE F+ +M   LL      I    L  AF   D+   G ++  EL
Sbjct: 122 ISQQISGGKVDFEDFVELMGPKLLAETADMIGVRELRDAFREFDTNGDGRISVGEL 177


>gi|4505303 smooth muscle and non-muscle myosin alkali light chain
           6B [Homo sapiens]
          Length = 208

 Score = 47.0 bits (110), Expect = 4e-06
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 7/117 (5%)

Query: 11  IVAEFHK----KIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEE 66
           +V EF+K    + KEAFE+FD   +  +   + G ++R+LG  PT  E+  ++   + +E
Sbjct: 57  VVIEFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDE 116

Query: 67  -PTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMT 122
             +  + FE FLP++  +   R      +   L  F V D    G +   EL   +T
Sbjct: 117 LKSRRVDFETFLPMLQAVAKNRGQGTYED--YLEGFRVFDKEGNGKVMGAELRHVLT 171



 Score = 34.7 bits (78), Expect = 0.023
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 21  EAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKFL 77
           E F VFD E N  V   E+  ++ +LG   TE E+  ++A    E+  G I +E FL
Sbjct: 148 EGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLA--GHEDSNGCINYEAFL 202


>gi|21624641 calcium binding protein 4 [Homo sapiens]
          Length = 275

 Score = 45.4 bits (106), Expect = 1e-05
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 3/113 (2%)

Query: 5   KDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEE 64
           KDRE  +  E   +++ AFE FD + +  +  RE+G  +R+LG  PTE EL ++   + +
Sbjct: 122 KDRE--LGPEELDELQAAFEEFDTDRDGYISHRELGDCMRTLGYMPTEMELLEVSQHI-K 178

Query: 65  EEPTGYIRFEKFLPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDEL 117
               G + FE+F+ ++   L E     +    L  AF   D  + G +T  EL
Sbjct: 179 MRMGGRVDFEEFVELIGPKLREETAHMLGVRELRIAFREFDRDRDGRITVAEL 231



 Score = 26.6 bits (57), Expect = 6.3
 Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 2/78 (2%)

Query: 5   KDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEG-ELHDLIAEVE 63
           K REE       ++++ AF  FD + +  + V E+   + +L   P  G EL +++ EV 
Sbjct: 197 KLREETAHMLGVRELRIAFREFDRDRDGRITVAELREAVPALLGEPLAGPELDEMLREV- 255

Query: 64  EEEPTGYIRFEKFLPVMT 81
           +    G + F++F+ +++
Sbjct: 256 DLNGDGTVDFDEFVMMLS 273


>gi|63054822 calneuron 1 isoform 2 [Homo sapiens]
          Length = 219

 Score = 44.3 bits (103), Expect = 3e-05
 Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 2/89 (2%)

Query: 2   ADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAE 61
           +D +    I V E  + I+EAF V D + N  +  +E+G  +RSLG  P+E EL  +I +
Sbjct: 25  SDSEQLANISVEELDE-IREAFRVLDRDGNGFISKQELGMAMRSLGYMPSEVEL-AIIMQ 82

Query: 62  VEEEEPTGYIRFEKFLPVMTEILLERKYR 90
             + +  G + F++F+ ++   L+  + R
Sbjct: 83  RLDMDGDGQVDFDEFMTILGPKLVSSEGR 111


>gi|157743275 calneuron 1 isoform 1 [Homo sapiens]
          Length = 261

 Score = 44.3 bits (103), Expect = 3e-05
 Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 2/89 (2%)

Query: 2   ADEKDREEIIVAEFHKKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAE 61
           +D +    I V E  + I+EAF V D + N  +  +E+G  +RSLG  P+E EL  +I +
Sbjct: 67  SDSEQLANISVEELDE-IREAFRVLDRDGNGFISKQELGMAMRSLGYMPSEVEL-AIIMQ 124

Query: 62  VEEEEPTGYIRFEKFLPVMTEILLERKYR 90
             + +  G + F++F+ ++   L+  + R
Sbjct: 125 RLDMDGDGQVDFDEFMTILGPKLVSSEGR 153


>gi|222144326 myosin regulatory light chain MRCL2 isoform A [Homo
           sapiens]
          Length = 172

 Score = 43.9 bits (102), Expect = 4e-05
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 9/106 (8%)

Query: 17  KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
           ++ KEAF + D   +  +D  ++  ++ SLG  PT+  L  ++      E  G I F  F
Sbjct: 32  QEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMM-----NEAPGPINFTMF 86

Query: 77  LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMT 122
           L +  E L        PEDV+  AF   D    G + +D L + +T
Sbjct: 87  LTMFGEKLNGTD----PEDVIRNAFACFDEEATGTIQEDYLRELLT 128


>gi|222144328 myosin regulatory light chain MRCL2 isoform B [Homo
           sapiens]
          Length = 154

 Score = 43.9 bits (102), Expect = 4e-05
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 9/106 (8%)

Query: 17  KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
           ++ KEAF + D   +  +D  ++  ++ SLG  PT+  L  ++      E  G I F  F
Sbjct: 14  QEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMM-----NEAPGPINFTMF 68

Query: 77  LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMT 122
           L +  E L        PEDV+  AF   D    G + +D L + +T
Sbjct: 69  LTMFGEKLNGTD----PEDVIRNAFACFDEEATGTIQEDYLRELLT 110


>gi|222144324 myosin regulatory light chain MRCL2 isoform A [Homo
           sapiens]
          Length = 172

 Score = 43.9 bits (102), Expect = 4e-05
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 9/106 (8%)

Query: 17  KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
           ++ KEAF + D   +  +D  ++  ++ SLG  PT+  L  ++      E  G I F  F
Sbjct: 32  QEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDAYLDAMM-----NEAPGPINFTMF 86

Query: 77  LPVMTEILLERKYRPIPEDVLLRAFEVLDSAKRGFLTKDELIKYMT 122
           L +  E L        PEDV+  AF   D    G + +D L + +T
Sbjct: 87  LTMFGEKLNGTD----PEDVIRNAFACFDEEATGTIQEDYLRELLT 128


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.140    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,917,156
Number of Sequences: 37866
Number of extensions: 206606
Number of successful extensions: 718
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 627
Number of HSP's gapped (non-prelim): 119
length of query: 133
length of database: 18,247,518
effective HSP length: 91
effective length of query: 42
effective length of database: 14,801,712
effective search space: 621671904
effective search space used: 621671904
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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