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Search of human proteins with 21700763
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21700763 hematological and neurological expressed 1-like
[Homo sapiens]
(190 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21700763 hematological and neurological expressed 1-like [Hom... 396 e-111
gi|7705877 hematological and neurological expressed 1 isoform 1 ... 52 4e-07
gi|50345294 hematological and neurological expressed 1 isoform 2... 45 3e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 39 0.002
gi|237757326 synaptojanin 1 isoform d [Homo sapiens] 39 0.003
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 39 0.003
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 39 0.003
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 38 0.005
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 38 0.005
gi|42518068 trans-golgi network protein 2 [Homo sapiens] 37 0.008
gi|224458284 Rho GTPase activating protein 23 [Homo sapiens] 37 0.010
gi|148727255 microtubule associated serine/threonine kinase fami... 37 0.010
gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain... 36 0.023
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 35 0.039
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 35 0.039
gi|28212272 hypothetical protein LOC161424 [Homo sapiens] 35 0.051
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 35 0.051
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 35 0.051
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 34 0.087
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 34 0.087
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 33 0.11
gi|55750053 atrophin-1 [Homo sapiens] 33 0.15
gi|55750041 atrophin-1 [Homo sapiens] 33 0.15
gi|47132519 Ras association and pleckstrin homology domains 1 is... 33 0.15
gi|31543148 hypothetical protein LOC79173 [Homo sapiens] 33 0.15
gi|239047414 slingshot 1 isoform 1 [Homo sapiens] 33 0.19
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 33 0.19
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 33 0.19
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 33 0.19
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ... 33 0.19
>gi|21700763 hematological and neurological expressed 1-like [Homo
sapiens]
Length = 190
Score = 396 bits (1018), Expect = e-111
Identities = 190/190 (100%), Positives = 190/190 (100%)
Query: 1 MFQVPDSEGGRAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKR 60
MFQVPDSEGGRAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKR
Sbjct: 1 MFQVPDSEGGRAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKR 60
Query: 61 TNPPGGKGSGIFDESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEG 120
TNPPGGKGSGIFDESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEG
Sbjct: 61 TNPPGGKGSGIFDESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEG 120
Query: 121 EEPKSDLKAARSIPAGAEPGEKGSARKAGPAKEQEPMPTVDSHEPRLGPRPRSHNKVLNP 180
EEPKSDLKAARSIPAGAEPGEKGSARKAGPAKEQEPMPTVDSHEPRLGPRPRSHNKVLNP
Sbjct: 121 EEPKSDLKAARSIPAGAEPGEKGSARKAGPAKEQEPMPTVDSHEPRLGPRPRSHNKVLNP 180
Query: 181 PGGKSSISFY 190
PGGKSSISFY
Sbjct: 181 PGGKSSISFY 190
>gi|7705877 hematological and neurological expressed 1 isoform 1
[Homo sapiens]
Length = 154
Score = 51.6 bits (122), Expect = 4e-07
Identities = 55/182 (30%), Positives = 71/182 (39%), Gaps = 50/182 (27%)
Query: 11 RAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGKGSG 70
R SR ++PPGG S+ G E R N+MASNIFG EE N G K SG
Sbjct: 15 RNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEE--NQASWAKSAGAKSSG 72
Query: 71 IFD--ESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEG---EEPKS 125
+ ES+ +Q R G D+ G EG E +
Sbjct: 73 GREDLESSGLQRRNSSEASSGDFLDLKG----------------------EGDIHENVDT 110
Query: 126 DLKAARSIPAGAEPGEKGSARKAGPAKEQEPMPTVDSHEPRLGPRPRSHNKVLNPPGGKS 185
DL PG G + E++P+P P + P P + NPPGGKS
Sbjct: 111 DL-----------PGSLGQS-------EEKPVPAAPVPSP-VAPAPVPSRR--NPPGGKS 149
Query: 186 SI 187
S+
Sbjct: 150 SL 151
>gi|50345294 hematological and neurological expressed 1 isoform 2
[Homo sapiens]
Length = 181
Score = 45.4 bits (106), Expect = 3e-05
Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 11 RAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGKGSG 70
R SR ++PPGG S+ G E R N+MASNIFG EE N G K SG
Sbjct: 15 RNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEE--NQASWAKSAGAKSSG 72
Query: 71 IFD--ESTPVQTRQHLNPPGGKTSDI 94
+ ES+ +Q R G D+
Sbjct: 73 GREDLESSGLQRRNSSEASSGDFLDL 98
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 39.3 bits (90), Expect = 0.002
Identities = 43/164 (26%), Positives = 54/164 (32%), Gaps = 16/164 (9%)
Query: 5 PDSEGGRAGSR---AMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQN----- 56
P +GG A A PP + G P +P P A+ P P
Sbjct: 948 PSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKG 1007
Query: 57 --IPKRTNPPGGKGSGIFDESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDH 114
P PP KGS +TP + PP GSP P P
Sbjct: 1008 APTPPAVTPPSPKGS---PAATPFP-KGASTPPAATPPSPKGSPAATPLPKGAPTTPAAT 1063
Query: 115 VFLCEGEEPKSDLKAARSIPAGAEPGEKGSARKAGPAKEQEPMP 158
+ +G LK A + PA P KG A P+ + PMP
Sbjct: 1064 LPSPKGGPATPSLKGAPTPPAATPPSPKGG--PATPSPKGAPMP 1105
Score = 33.5 bits (75), Expect = 0.11
Identities = 42/164 (25%), Positives = 49/164 (29%), Gaps = 13/164 (7%)
Query: 20 PGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGKGSGIFDESTPVQ 79
P S +P ATP S A+ P+ + P PP KG
Sbjct: 931 PASPSPKGAPTPPAATPPSPKGGPAT----PSPKWAPTPPAATPPSPKGGPATPSPKGAP 986
Query: 80 TRQHLNPPGGKTSDIFGSPVTA-TSRLAHPNKPKDHVFLCEGEEPKSDL-KAARSIPAGA 137
T PP K SP A T P PK G + K A + PA
Sbjct: 987 TPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPK-------GSPAATPFPKGASTPPAAT 1039
Query: 138 EPGEKGSARKAGPAKEQEPMPTVDSHEPRLGPRPRSHNKVLNPP 181
P KGS K P P+ GP S PP
Sbjct: 1040 PPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPP 1083
Score = 28.1 bits (61), Expect = 4.8
Identities = 44/177 (24%), Positives = 57/177 (32%), Gaps = 28/177 (15%)
Query: 13 GSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGKGSGIF 72
G A PP G + P ATP S +A+ P + P PP KG
Sbjct: 1253 GGPATPPPKGAPT-----PPAATPPSLKGGLAT----PPHKGAPNPAVVTPPSPKGGPAT 1303
Query: 73 DESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEGEEPKSDLKAARS 132
T PP K GSP T + A P P P S K +
Sbjct: 1304 SPPKGAPTPPAATPPSPK-----GSPGTPPPKGA-PTPP--------AVTPPSP-KGTPT 1348
Query: 133 IPAGAEPGEKGSARKAGPAKEQEPMPTVDSHE---PRLGPRPRSHNKVLNPPGGKSS 186
+PA P KG + P SH+ P P+ + +P G +S
Sbjct: 1349 LPA-TTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTS 1404
>gi|237757326 synaptojanin 1 isoform d [Homo sapiens]
Length = 1526
Score = 38.9 bits (89), Expect = 0.003
Identities = 47/194 (24%), Positives = 68/194 (35%), Gaps = 26/194 (13%)
Query: 11 RAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGKGSG 70
RA SR PP +SS + P P P + P P P R PP
Sbjct: 1065 RAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPP------ 1118
Query: 71 IFDESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHP------NKPKDHVFLCEGE-EP 123
P R +P G G +T+R P + P+ H G P
Sbjct: 1119 --QRPPPPSGRSQPSPQAGLAGP--GPAGYSTARPTIPPRAGVISAPQSHARASAGRLTP 1174
Query: 124 KSDLKAARS------IPAGAEPGEKGSARKAGP---AKEQEPMPTVDSHEPRLGPRPRSH 174
+S K + + +P +P + + P + QEP+ V + P+ GP+P
Sbjct: 1175 ESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLE 1234
Query: 175 NKVLNPPGGKSSIS 188
PP +SS S
Sbjct: 1235 TPPQPPPRSRSSHS 1248
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 38.9 bits (89), Expect = 0.003
Identities = 42/167 (25%), Positives = 62/167 (37%), Gaps = 21/167 (12%)
Query: 32 EEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGK------GSGIFDESTPVQTRQHLN 85
E+ + P+ +A N GP+ + N P+ PP GK G + P +
Sbjct: 21 EDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP 80
Query: 86 PPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEGEEPKSDLKAARSIPAG------AEP 139
PP G S SP P P +G P+ K P G A+
Sbjct: 81 PPQGDKSRSPRSPP------GKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQG 134
Query: 140 GEKGSARKAGPAKEQEPMPTVDSHEPRLGPRPRSHN--KVLNPPGGK 184
G K + ++ P K Q P P + + P+ P P N + PP G+
Sbjct: 135 GSKSQSARSPPGKPQGP-PQQEGNNPQGPPPPAGGNPQQPQAPPAGQ 180
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 38.9 bits (89), Expect = 0.003
Identities = 51/192 (26%), Positives = 64/192 (33%), Gaps = 36/192 (18%)
Query: 3 QVPDSEGGRAGSRAMKPPG---------GESSNLFGSPEEATPSSRPNRMASNIFGPTEE 53
Q P +GG PPG G S G P RP N T
Sbjct: 58 QGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQ--GPPPHPGKPERPPPQGGNQSQGTPP 115
Query: 54 PQNIPKRTNPPGGKGSGIFDESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKD 113
P P+R P GG S P + P GG S G P HP KP
Sbjct: 116 PPGKPERPPPQGGNQS--HRPPPPPGKPERPPPQGGNQSQ--GPP-------PHPGKP-- 162
Query: 114 HVFLCEGEEPKSDLKAARSIPAGAEPGE-KGSARKAGPAKEQEPMPTVDSHEPRLGPRPR 172
EG P+ + +S A + PG+ +G ++ G + P P P G P+
Sbjct: 163 -----EGPPPQ---EGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQ 214
Query: 173 SHNKVLNPPGGK 184
PP GK
Sbjct: 215 QPQA---PPAGK 223
Score = 29.3 bits (64), Expect = 2.1
Identities = 43/156 (27%), Positives = 51/156 (32%), Gaps = 23/156 (14%)
Query: 19 PPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGKGSGIFDESTPV 78
P GG S G+P RP N P P+R P GG S + P
Sbjct: 104 PQGGNQSQ--GTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQS----QGPP- 156
Query: 79 QTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEGEEPKSDL---KAARSIPA 135
H P G +A S P P EG +P+ K PA
Sbjct: 157 ---PHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQ----EGNKPQGPPPPGKPQGPPPA 209
Query: 136 GAEPGEKGSARKAGPAKEQEPMPTVDSHEPRLGPRP 171
G P ++ A AG K Q P P P PRP
Sbjct: 210 GGNP-QQPQAPPAG--KPQGPPPPPQGGRP---PRP 239
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 38.1 bits (87), Expect = 0.005
Identities = 45/165 (27%), Positives = 62/165 (37%), Gaps = 27/165 (16%)
Query: 32 EEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGKGSGIFDESTPVQ--TRQHLNPPGG 89
E+ + P+ +A N GP+ + N P+ PP GK G P Q + PP G
Sbjct: 21 EDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQG-----PPPQGGNKPQGPPPPG 75
Query: 90 KTSDIFGSPVTATSRLAHPNKPKDHVFLCEGEEPKSDLKAARSIPAGAE---PGEKGSAR 146
K + S + P KP +G P+ + P + P +G R
Sbjct: 76 KPQGPPPQGDKSRSPRSPPGKP-------QGPPPQGGNQPQGPPPPPGKPQGPPPQGGNR 128
Query: 147 KAG---PAKEQEPMPTVD-SHEPR------LGPRPRSHNKVLNPP 181
G P K Q P P D S PR GP P+ N+ PP
Sbjct: 129 PQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPP 173
Score = 35.4 bits (80), Expect = 0.030
Identities = 51/194 (26%), Positives = 64/194 (32%), Gaps = 32/194 (16%)
Query: 3 QVPDSEGGRAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTN 62
Q P +GG + PPG G P + S P GP + N P+
Sbjct: 58 QGPPPQGGNK-PQGPPPPGKPQ----GPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPP 112
Query: 63 PPGGKGSGIFDESTPVQ--TRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEG 120
PP GK G P Q R PP GK + S + P KP +G
Sbjct: 113 PPPGKPQG-----PPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKP-------QG 160
Query: 121 EEPKSDLKAARSIPAGAEP------GEKGSARKAGPAKEQEPMPTVD----SHEP---RL 167
P+ + P +P G K P K Q P P D S P
Sbjct: 161 PPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQ 220
Query: 168 GPRPRSHNKVLNPP 181
GP P+ N+ PP
Sbjct: 221 GPPPQGGNQPQGPP 234
Score = 30.0 bits (66), Expect = 1.3
Identities = 43/181 (23%), Positives = 61/181 (33%), Gaps = 32/181 (17%)
Query: 3 QVPDSEGGRAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTN 62
Q P +GG+ + PPG G P + S GP + N P+
Sbjct: 180 QGPPPQGGKK-PQGPPPPGKPQ----GPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPP 234
Query: 63 PPGGKGSGIFDESTPVQ--TRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEG 120
PP GK G P Q + PP GK G P S+ P
Sbjct: 235 PPPGKPQG-----PPPQGGNKPQGPPPPGKPQ---GPPAQGGSKSQSARSPPG------- 279
Query: 121 EEPKSDLKAARSIPAGAEPGEKGSARKAGPAKEQEPMPTVDSHEPRLGPRPRSHNKVLNP 180
+P+ + + P G P G+ P + Q P + +P+ PRP + P
Sbjct: 280 -KPQGPPQQEGNNPQGPPPPAGGN-----PQQPQAP----PAGQPQGPPRPPQGGRPSRP 329
Query: 181 P 181
P
Sbjct: 330 P 330
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 38.1 bits (87), Expect = 0.005
Identities = 42/159 (26%), Positives = 63/159 (39%), Gaps = 25/159 (15%)
Query: 32 EEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGKGSGIFDESTPVQ--TRQHLNPPGG 89
E+ + P+ +A N GP+ + N P+ PP GK G P Q + PP G
Sbjct: 21 EDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQG-----PPPQGGNKPQGPPPPG 75
Query: 90 KTSDIFGSPVTATSRLAHPNKPKDHVFLCEGEEPKSDLKAARSIPAG--AEPGEKGSARK 147
K + S + P KP +G P+ P G A+ G K + +
Sbjct: 76 KPQGPPPQGDKSRSPRSPPGKP-------QGPPPQG------GKPQGPPAQGGSKSQSAR 122
Query: 148 AGPAKEQEPMPTVDSHEPRLGPRPRSHN--KVLNPPGGK 184
+ P K Q P P + + P+ P P N + PP G+
Sbjct: 123 SPPGKPQGP-PQQEGNNPQGPPPPAGGNPQQPQAPPAGQ 160
>gi|42518068 trans-golgi network protein 2 [Homo sapiens]
Length = 437
Score = 37.4 bits (85), Expect = 0.008
Identities = 43/177 (24%), Positives = 68/177 (38%), Gaps = 17/177 (9%)
Query: 3 QVPDSEGGRAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTN 62
Q P ++G+ P + N G+ E+ TP N+ + GP + P
Sbjct: 187 QTPKDGSSKSGAEDQTPK--DVPNKSGA-EKQTPKDGSNKSGAEEQGPIDGPSKSGAEEQ 243
Query: 63 PPGGKGSGIFDESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCE-GE 121
+ + E +R+ + P SD P T++LA K H F E GE
Sbjct: 244 TSKDSPNKVVPEQP---SRKDHSKPISNPSDNKELPKADTNQLADKGKLSPHAFKTESGE 300
Query: 122 E------PKSDLKAARSI----PAGAEPGEKGSARKAGPAKEQEPMPTVDSHEPRLG 168
E P+ ++K++ P AE + G + P +E+E M S E R G
Sbjct: 301 ETDLISPPQEEVKSSEPTEDVEPKEAEDDDTGPEEGSPPKEEKEKMSGSASSENREG 357
Score = 33.9 bits (76), Expect = 0.087
Identities = 37/140 (26%), Positives = 54/140 (38%), Gaps = 25/140 (17%)
Query: 7 SEGGRAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTNPP-- 64
++ G+ A K GE ++L P+E SS P E+ P+ +PP
Sbjct: 284 ADKGKLSPHAFKTESGEETDLISPPQEEVKSSEPTEDVEP--KEAEDDDTGPEEGSPPKE 341
Query: 65 -----GGKGS-----GIFDESTPVQTRQHLNPPG-----GKTSDIFGSPVT-----ATSR 104
G S G +ST + + L P G ++S F VT A
Sbjct: 342 EKEKMSGSASSENREGTLSDSTGSE-KDDLYPNGSGNGSAESSHFFAYLVTAAILVAVLY 400
Query: 105 LAHPNKPKDHVFLCEGEEPK 124
+AH NK K F+ EG+ K
Sbjct: 401 IAHHNKRKIIAFVLEGKRSK 420
>gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]
Length = 1397
Score = 37.0 bits (84), Expect = 0.010
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 14/158 (8%)
Query: 5 PDSEG-GRAGSRAMKPPGGESSNLFGS--PEEATPSSRPNRMAS---NIFGPTEEPQNIP 58
PD EG GR G RA +PPG SS+ S P A +SRP+RM + + G ++ +
Sbjct: 1234 PDGEGAGRGGPRAPEPPGSASSSSQESLRPPAAALASRPSRMEALRLRLRGTADDMLAVR 1293
Query: 59 KR--TNPPGGKGSGIFDESTPV--QTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDH 114
R +P + + T V LN K G P A +R AH +
Sbjct: 1294 LRRPLSPETRRRRSSWRRHTVVVQSPLTDLNFNEWKELGGGGPPEPAGAR-AHSDNKDSG 1352
Query: 115 VFLCEGEEPKSDLKAARSIPAGAEPGEKGSARKAGPAK 152
+ E + ++ AA PA PG+ GS + P +
Sbjct: 1353 LSSLESTKARAPSSAASQPPA---PGDTGSLQSQPPRR 1387
>gi|148727255 microtubule associated serine/threonine kinase family
member 4 isoform a [Homo sapiens]
Length = 2434
Score = 37.0 bits (84), Expect = 0.010
Identities = 41/173 (23%), Positives = 63/173 (36%), Gaps = 31/173 (17%)
Query: 20 PGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGKGSGIFDESTPVQ 79
PGG++++ G P EA P R N + P E+ +R G+ + +
Sbjct: 1849 PGGKTNHKDG-PGEARPPPRDNSSLHSAGIPCEKELGKVRR---------GVEPKPEALL 1898
Query: 80 TRQHLNPPG---GKTSDIFGSPVTATSRLAHPNKPKDHVFLCEGEEPKSDLKA------- 129
R+ L PPG K+ + P P + + + P L A
Sbjct: 1899 ARRSLQPPGIESEKSEKLSSFPSLQKDGAKEPERKEQPLQRHPSSIPPPPLTAKDLSSPA 1958
Query: 130 ------ARSIPAGAEPGEKGSARKAGPAKEQEPMPTV-----DSHEPRLGPRP 171
+ S +G EPG K S + + + P P SH+PR GP P
Sbjct: 1959 ARQHCSSPSHASGREPGAKPSTAEPSSSPQDPPKPVAAHSESSSHKPRPGPDP 2011
>gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain and
proline-rich containing [Homo sapiens]
Length = 1435
Score = 35.8 bits (81), Expect = 0.023
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 9/74 (12%)
Query: 119 EGEEPKSDLKA-ARSIPAGAEPGEKGSARKAGPAKEQEPMPTVD--------SHEPRLGP 169
E EP+ +L A A P +GS A P P+P +D H R P
Sbjct: 965 EEAEPEPELAAPGEDAEPQAGPSARGSPSPAAPGPPAGPLPRMDLPLAGQPLRHPTRARP 1024
Query: 170 RPRSHNKVLNPPGG 183
RPR + PPGG
Sbjct: 1025 RPRRQHHHRPPPGG 1038
Score = 27.3 bits (59), Expect = 8.1
Identities = 43/187 (22%), Positives = 72/187 (38%), Gaps = 31/187 (16%)
Query: 10 GRAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTNP-----P 64
GR+ R + S L + EEAT +RP++ G TE + +R
Sbjct: 1162 GRSRPRYTRDSKAYSMILLPAEEEATLGARPDKRRPLERGETELAPSFEQRVQVMLQRIG 1221
Query: 65 GGKGSGIFDESTPVQTRQHLNPPGGKTSDIFGS-----PVTATSRL----AHPN------ 109
+GSG E Q++ G DI S P++ SR A P+
Sbjct: 1222 VSRGSG-GAEGKRKQSKDGEIKKAGSDGDIMDSSTEAPPISIKSRTHSVSADPSCRPGPG 1280
Query: 110 --KPKDHVFLCEGEEPKSDLKA----ARSIPAGAEPGEKGSARKAGPAKEQEPMPTVDSH 163
P+ + G++ ++L++ + P PG+ S + P+ + +P
Sbjct: 1281 SQGPESATWKTLGQQLNAELRSRGWGQQDGPGPPSPGQSPSPCRTSPSPDSLGLP----E 1336
Query: 164 EPRLGPR 170
+P LGPR
Sbjct: 1337 DPCLGPR 1343
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 35.0 bits (79), Expect = 0.039
Identities = 50/211 (23%), Positives = 73/211 (34%), Gaps = 34/211 (16%)
Query: 11 RAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGKGSG 70
RA SR PP +SS + P P P + P P P R PP +
Sbjct: 1070 RAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPP-QRPPP 1128
Query: 71 IFDESTPVQTRQHL---NPPGGKTSDIFG-SPVTATSRLAHP------------------ 108
+P TR+ PG D G S + + LA P
Sbjct: 1129 PSGARSPAPTRKEFGAPKSPGTTRKDNIGRSQPSPQAGLAGPGPAGYSTARPTIPPRAGV 1188
Query: 109 -NKPKDHVFLCEGE-EPKSDLKAARS------IPAGAEPGEKGSARKAGP---AKEQEPM 157
+ P+ H G P+S K + + +P +P + + P + QEP+
Sbjct: 1189 ISAPQSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPL 1248
Query: 158 PTVDSHEPRLGPRPRSHNKVLNPPGGKSSIS 188
V + P+ GP+P PP +SS S
Sbjct: 1249 VPVAAPMPQSGPQPNLETPPQPPPRSRSSHS 1279
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 35.0 bits (79), Expect = 0.039
Identities = 44/175 (25%), Positives = 65/175 (37%), Gaps = 24/175 (13%)
Query: 29 GSPEEATPSSRPNRM--ASNIFGPTEEPQNIPKRTN-----PPGGKGSGIFDESTPVQTR 81
G PE+++ PN + AS G N P T PPGG S P
Sbjct: 325 GPPEDSSQDLAPNSVGAASTGGGTGGTHPNTPTATTANNPLPPGGDPSSA---PGPALLG 381
Query: 82 QHLNPPGGKTSDIFGSPVTATSRLAHPNKPK------DHVFLCEGEE-------PKSDLK 128
+ P G+ S + GS + +L H + + + L GE P +
Sbjct: 382 EAAAPGNGQRS-LVGSEGLSKEQLEHRERSLQTLRDIERLLLRSGETEPFLKGPPGGAGE 440
Query: 129 AARSIPAGAEPGEKGSARKAGPAKEQEPMPTVDSHEPRLGPRPRSHNKVLNPPGG 183
A P + +A +G K +EP+ ++ S LG P H +PPGG
Sbjct: 441 GGPPAQAPPPPQQPPTAPPSGLKKYEEPLQSMISQTQSLGGPPLEHEVPGHPPGG 495
>gi|28212272 hypothetical protein LOC161424 [Homo sapiens]
Length = 636
Score = 34.7 bits (78), Expect = 0.051
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 120 GEEPKSDLKAARSIPAGAEPGE--KGSARKAGPAKEQEPMPTVDSHEPRLGPRPRSH 174
G+ P+S K R PAG + G KGS R P ++++P P D R P P SH
Sbjct: 2 GQGPRSPHKVGRRFPAGGKRGRGAKGSGRPL-PGRKRQPWPPPDG---RSEPAPDSH 54
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 34.7 bits (78), Expect = 0.051
Identities = 45/179 (25%), Positives = 58/179 (32%), Gaps = 41/179 (22%)
Query: 3 QVPDSEGGRAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTN 62
Q P +GG + PPG G P + S P GP + N P+
Sbjct: 79 QGPPPQGGNK-PQGPPPPGKPQ----GPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPP 133
Query: 63 PPGGKGSGIFDESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEGEE 122
PP GK G PP G P P KP +G
Sbjct: 134 PPPGKPQG--------------PPPQGGNKPQGPPP---------PGKP-------QGPP 163
Query: 123 PKSDLKAARSIPAGAEPGEKGSARKAGPAKEQEPMPTVDSHEPRLGPRPRSHNKVLNPP 181
P+ D K+ S + PG+ G + Q P P + GP P+ NK PP
Sbjct: 164 PQGDNKSRSS---RSPPGKPQGPPPQGGNQPQGPPPPPGKPQ---GPPPQGGNKPQGPP 216
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 34.7 bits (78), Expect = 0.051
Identities = 44/173 (25%), Positives = 60/173 (34%), Gaps = 29/173 (16%)
Query: 11 RAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGKGSG 70
R G PP G + + P P +P + + GP P P+ P GG S
Sbjct: 74 RPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGK-PEGPPPQGGNQS- 131
Query: 71 IFDESTPVQTRQHLNPP--GGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEGEEPKSDLK 128
+ P + + PP GG S G P P KP EG P+ +
Sbjct: 132 ---QGPPPRPGKPEGPPPQGGNQSQ--GPP-------PRPGKP-------EGPPPQGGNQ 172
Query: 129 AARSIPAGAEPGEKGSARKAGPAKEQEPMPTVDSHEPRLGPRPRSHNKVLNPP 181
+ P PG+ G + Q P P E GP P+ N+ PP
Sbjct: 173 SQGPPP---HPGKPEGPPPQGGNQSQGPPPRPGKPE---GPPPQGGNQSQGPP 219
Score = 33.5 bits (75), Expect = 0.11
Identities = 36/150 (24%), Positives = 52/150 (34%), Gaps = 14/150 (9%)
Query: 32 EEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGKGSGIFDESTPVQTRQHLNPPGGKT 91
E+ + P+ ++ G + N P+RT PP GK G P Q PP
Sbjct: 21 EDVSQEESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEG----RPPQGGNQSQGPPPRPG 76
Query: 92 SDIFGSPVTATSRLAHPNKPKDHVFLCEGEEPKSDLKAARSIPAGAEPGEKGSARKAGPA 151
P P +P EG+ P+ ++ P PG+ G
Sbjct: 77 KPEGPPPQGGNQSQGPPPRPGKP----EGQPPQGGNQSQGPPP---RPGKPEGPPPQGGN 129
Query: 152 KEQEPMPTVDSHEPRLGPRPRSHNKVLNPP 181
+ Q P P E GP P+ N+ PP
Sbjct: 130 QSQGPPPRPGKPE---GPPPQGGNQSQGPP 156
Score = 27.3 bits (59), Expect = 8.1
Identities = 24/90 (26%), Positives = 31/90 (34%), Gaps = 13/90 (14%)
Query: 11 RAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQ----------NIPKR 60
R G PP G + + P P P++ + GP P N P+R
Sbjct: 200 RPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQR 259
Query: 61 TNPPGGKGSGIFDESTPVQTRQHLNPPGGK 90
PPG P +Q L PP GK
Sbjct: 260 PPPPGRPQGPPPPGGNP---QQPLPPPAGK 286
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 33.9 bits (76), Expect = 0.087
Identities = 41/166 (24%), Positives = 53/166 (31%), Gaps = 26/166 (15%)
Query: 11 RAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGKGSG 70
RA SR PP +SS + P P P + P P P R PP
Sbjct: 1109 RAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPP------ 1162
Query: 71 IFDESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEGEEPKSDLKAA 130
+ P + P K G+P P V E E PKS
Sbjct: 1163 ---QRPPPPSGARSPAPTRKEFGGIGAP------------PSPGVARREMEAPKSPGTTR 1207
Query: 131 RSIPAGAEPGEKGSARKAGPAKEQEPMPTVDSHEPRLG--PRPRSH 174
+ ++P + GPA PT+ PR G P+SH
Sbjct: 1208 KDNIGRSQPSPQAGLAGPGPAGYSTARPTI---PPRAGVISAPQSH 1250
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 33.9 bits (76), Expect = 0.087
Identities = 41/166 (24%), Positives = 53/166 (31%), Gaps = 26/166 (15%)
Query: 11 RAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGKGSG 70
RA SR PP +SS + P P P + P P P R PP
Sbjct: 1109 RAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPP------ 1162
Query: 71 IFDESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEGEEPKSDLKAA 130
+ P + P K G+P P V E E PKS
Sbjct: 1163 ---QRPPPPSGARSPAPTRKEFGGIGAP------------PSPGVARREMEAPKSPGTTR 1207
Query: 131 RSIPAGAEPGEKGSARKAGPAKEQEPMPTVDSHEPRLG--PRPRSH 174
+ ++P + GPA PT+ PR G P+SH
Sbjct: 1208 KDNIGRSQPSPQAGLAGPGPAGYSTARPTI---PPRAGVISAPQSH 1250
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 33.5 bits (75), Expect = 0.11
Identities = 38/150 (25%), Positives = 54/150 (36%), Gaps = 27/150 (18%)
Query: 14 SRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGKGSGIFD 73
S + PG +S L P A+ SS A+ GP + PQ ++ P
Sbjct: 3156 STTVPSPGLPTSGLPNKPSSASLSSPTPAQATMAMGPQQPPQQQQQQQQP---------- 3205
Query: 74 ESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEGEEPKSDLKA--AR 131
Q +Q PP + P T L + KD + E+ K KA +
Sbjct: 3206 -----QVQQPPPPPAAQ------PPPTPQLPLQQQQQRKDK----DSEKVKEKEKAHKGK 3250
Query: 132 SIPAGAEPGEKGSARKAGPAKEQEPMPTVD 161
P EKG A A A P+PT++
Sbjct: 3251 GEPLPVPKKEKGEAPTATAATISAPLPTME 3280
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 33.1 bits (74), Expect = 0.15
Identities = 52/186 (27%), Positives = 68/186 (36%), Gaps = 36/186 (19%)
Query: 3 QVPDSEGGRAGSRAMKPPGGESSNLFGSPEEAT-PSSRPNRMASNIFGPTEEPQNIPKRT 61
QV S+ G G PP SSN S + + P S P+ P++ PQ P
Sbjct: 555 QVSYSQAGPNG-----PPVSSSSNSSSSTSQGSYPCSHPS--------PSQGPQGAPYPF 601
Query: 62 NPPGGKGSGIFDESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEGE 121
P + ST + T +P G KT+ G P R P K G
Sbjct: 602 PPVPTVTTSSATLSTVIATVAS-SPAGYKTASPPGPPPYG-KRAPSPGAYKTAT--PPGY 657
Query: 122 EPKSDLKAARSIPAGAEPGEKGSARKAGPAKEQEPMPTVDSHEPRLGPRPRSHNKVLNPP 181
+P S S G PG +G++ AGP + PTV GP P PP
Sbjct: 658 KPGSP----PSFRTGTPPGYRGTSPPAGPGTFKPGSPTV-------GPGPL-------PP 699
Query: 182 GGKSSI 187
G S +
Sbjct: 700 AGPSGL 705
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 33.1 bits (74), Expect = 0.15
Identities = 52/186 (27%), Positives = 68/186 (36%), Gaps = 36/186 (19%)
Query: 3 QVPDSEGGRAGSRAMKPPGGESSNLFGSPEEAT-PSSRPNRMASNIFGPTEEPQNIPKRT 61
QV S+ G G PP SSN S + + P S P+ P++ PQ P
Sbjct: 555 QVSYSQAGPNG-----PPVSSSSNSSSSTSQGSYPCSHPS--------PSQGPQGAPYPF 601
Query: 62 NPPGGKGSGIFDESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEGE 121
P + ST + T +P G KT+ G P R P K G
Sbjct: 602 PPVPTVTTSSATLSTVIATVAS-SPAGYKTASPPGPPPYG-KRAPSPGAYKTAT--PPGY 657
Query: 122 EPKSDLKAARSIPAGAEPGEKGSARKAGPAKEQEPMPTVDSHEPRLGPRPRSHNKVLNPP 181
+P S S G PG +G++ AGP + PTV GP P PP
Sbjct: 658 KPGSP----PSFRTGTPPGYRGTSPPAGPGTFKPGSPTV-------GPGPL-------PP 699
Query: 182 GGKSSI 187
G S +
Sbjct: 700 AGPSGL 705
>gi|47132519 Ras association and pleckstrin homology domains 1 isoform
1 [Homo sapiens]
Length = 1250
Score = 33.1 bits (74), Expect = 0.15
Identities = 44/170 (25%), Positives = 58/170 (34%), Gaps = 30/170 (17%)
Query: 19 PPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGKGSGIFDESTPV 78
PP ES L P P S P A + P+ P P PP + S +F P
Sbjct: 875 PPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPD-FPPPPPESSLVFPPPPPS 933
Query: 79 QTRQHLNPP---GGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEGEEPKSDLKAARSIPA 135
PP T D GSP TS+ + P G++P
Sbjct: 934 PVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPG----------GKKPP----------- 972
Query: 136 GAEPGEKGSARKAGPAKEQEP-MPTVDSHEPRLGPRPRS---HNKVLNPP 181
P S + + A+ EP P+VDS + P S + L PP
Sbjct: 973 -PTPQRNSSIKSSSGAEHPEPKRPSVDSLVSKFTPPAESGSPSKETLPPP 1021
>gi|31543148 hypothetical protein LOC79173 [Homo sapiens]
Length = 637
Score = 33.1 bits (74), Expect = 0.15
Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 16/144 (11%)
Query: 29 GSPEEATPSSRPNRMASNIFGPTEE-PQNIPKRTNPPGGKGSGIFDESTPVQTRQHLNPP 87
G P +A S+RP + + + P + P + + + P +G+G+ ++ ++ HL+
Sbjct: 162 GDPTQAD-SARPEQSSQS---PVQAVPGSGDSQPDDPPDRGTGL--SASQRASQDHLSEQ 215
Query: 88 GGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEGEEPKSDLKAARSIPAGAEPGEKGSARK 147
G S T R+ K+H+ + E K D A + G G+
Sbjct: 216 GADDSK------PETDRVPGDGGQKEHLPSIDSEGEKPDRGAPQE---GGAQRTAGAGLP 266
Query: 148 AGPAKEQEPMPTVDSHEPRLGPRP 171
GP +E + +P + P GP P
Sbjct: 267 GGPQEEGDGVPCTPASAPTSGPAP 290
>gi|239047414 slingshot 1 isoform 1 [Homo sapiens]
Length = 1049
Score = 32.7 bits (73), Expect = 0.19
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 11/103 (10%)
Query: 34 ATPSSRPNRMASNIFGPTEEPQNIP---KRTNPPGGKGSGIFDESTPVQTRQHLNPPGGK 90
A+ S P + AS GPTE P +P R G G+G ++ L P +
Sbjct: 695 ASRSRVPEKPAS---GPTEPPPFLPPAGSRRADTSGPGAG-----AALEPPASLLEPSRE 746
Query: 91 TSDIFGSPVTATSRLAHPNKPKDHVFLCEGEEPKSDLKAARSI 133
T + + + N P V + E PK D+K A+ +
Sbjct: 747 TPKVLPKSLLLKNSHCDKNPPSTEVVIKEESSPKKDMKPAKDL 789
>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
[Homo sapiens]
Length = 1412
Score = 32.7 bits (73), Expect = 0.19
Identities = 35/148 (23%), Positives = 56/148 (37%), Gaps = 9/148 (6%)
Query: 11 RAGSRAMKPPGGESSNLFGSPEEATPSSRP--NRMASNIFGPTEEPQNIPKRTNPPGGKG 68
R G++A + G +S SP A + RP + +S EE + G
Sbjct: 583 RVGTQAPRKAGTATSPAGSSPAVAGGTQRPAEDSSSSEESDSEEEKTGLAVTVGQAKSVG 642
Query: 69 SGIFDESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEGEEPKSDLK 128
G+ ++ V + L G T+ + T K +D E E +SD +
Sbjct: 643 KGLQVKAASVPVKGSL---GQGTAPVLPGKTGPTVTQVKAEKQEDS----ESSEEESDSE 695
Query: 129 AARSIPAGAEPGEKGSARKAGPAKEQEP 156
A + PA + K + KA PA + P
Sbjct: 696 EAAASPAQVKTSVKKTQAKANPAAARAP 723
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 32.7 bits (73), Expect = 0.19
Identities = 35/148 (23%), Positives = 56/148 (37%), Gaps = 9/148 (6%)
Query: 11 RAGSRAMKPPGGESSNLFGSPEEATPSSRP--NRMASNIFGPTEEPQNIPKRTNPPGGKG 68
R G++A + G +S SP A + RP + +S EE + G
Sbjct: 660 RVGTQAPRKAGTATSPAGSSPAVAGGTQRPAEDSSSSEESDSEEEKTGLAVTVGQAKSVG 719
Query: 69 SGIFDESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEGEEPKSDLK 128
G+ ++ V + L G T+ + T K +D E E +SD +
Sbjct: 720 KGLQVKAASVPVKGSL---GQGTAPVLPGKTGPTVTQVKAEKQEDS----ESSEEESDSE 772
Query: 129 AARSIPAGAEPGEKGSARKAGPAKEQEP 156
A + PA + K + KA PA + P
Sbjct: 773 EAAASPAQVKTSVKKTQAKANPAAARAP 800
>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
[Homo sapiens]
Length = 1488
Score = 32.7 bits (73), Expect = 0.19
Identities = 35/148 (23%), Positives = 56/148 (37%), Gaps = 9/148 (6%)
Query: 11 RAGSRAMKPPGGESSNLFGSPEEATPSSRP--NRMASNIFGPTEEPQNIPKRTNPPGGKG 68
R G++A + G +S SP A + RP + +S EE + G
Sbjct: 660 RVGTQAPRKAGTATSPAGSSPAVAGGTQRPAEDSSSSEESDSEEEKTGLAVTVGQAKSVG 719
Query: 69 SGIFDESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEGEEPKSDLK 128
G+ ++ V + L G T+ + T K +D E E +SD +
Sbjct: 720 KGLQVKAASVPVKGSL---GQGTAPVLPGKTGPTVTQVKAEKQEDS----ESSEEESDSE 772
Query: 129 AARSIPAGAEPGEKGSARKAGPAKEQEP 156
A + PA + K + KA PA + P
Sbjct: 773 EAAASPAQVKTSVKKTQAKANPAAARAP 800
>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b
[Homo sapiens]
Length = 1411
Score = 32.7 bits (73), Expect = 0.19
Identities = 35/148 (23%), Positives = 56/148 (37%), Gaps = 9/148 (6%)
Query: 11 RAGSRAMKPPGGESSNLFGSPEEATPSSRP--NRMASNIFGPTEEPQNIPKRTNPPGGKG 68
R G++A + G +S SP A + RP + +S EE + G
Sbjct: 583 RVGTQAPRKAGTATSPAGSSPAVAGGTQRPAEDSSSSEESDSEEEKTGLAVTVGQAKSVG 642
Query: 69 SGIFDESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEGEEPKSDLK 128
G+ ++ V + L G T+ + T K +D E E +SD +
Sbjct: 643 KGLQVKAASVPVKGSL---GQGTAPVLPGKTGPTVTQVKAEKQEDS----ESSEEESDSE 695
Query: 129 AARSIPAGAEPGEKGSARKAGPAKEQEP 156
A + PA + K + KA PA + P
Sbjct: 696 EAAASPAQVKTSVKKTQAKANPAAARAP 723
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.130 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,170,676
Number of Sequences: 37866
Number of extensions: 712004
Number of successful extensions: 2279
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 203
Number of HSP's that attempted gapping in prelim test: 2062
Number of HSP's gapped (non-prelim): 402
length of query: 190
length of database: 18,247,518
effective HSP length: 96
effective length of query: 94
effective length of database: 14,612,382
effective search space: 1373563908
effective search space used: 1373563908
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.