Guide to the Human Genome
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Name: HN1 Sequence: fasta or formatted (154aa) NCBI GI: 7705877
Description:

hematological and neurological expressed 1 isoform 1

Referenced in:

Neurons

Other entries for this name:
alt prot [108aa] hematological and neurological expressed 1 isoform 3
alt prot [181aa] hematological and neurological expressed 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         10           2
 C cysteine            0.0          0           0
 D aspartate           5.2          8           1
 E glutamate           7.1         11           2
 F phenylalanine       3.2          5           1
 G glycine            11.7         18           3
 H histidine           0.6          1           1
 I isoleucine          1.3          2           1
 K lysine              5.2          8           1
 L leucine             6.5         10           1
 M methionine          1.3          2           1
 N asparagine          5.8          9           1
 P proline            11.0         17           2
 Q glutamine           2.6          4           1
 R arginine            5.8          9           2
 S serine             14.3         22           2
 T threonine           5.2          8           5
 V valine              5.8          9           1
 W tryptophan          0.6          1           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hematological and neurological expressed 1 isoform 1 ... 
HN1                   0.672   hematological and neurological expressed 1 isoform 3...
HN1                   0.610   hematological and neurological expressed 1 isoform 2...
HN1L                  0.094   hematological and neurological expressed 1-like [Hom...
MYO9B                 0.056   myosin IXB isoform 1 
SETD1A                0.042   SET domain containing 1A 
PHACTR2               0.042   phosphatase and actin regulator 2 isoform 3 
PHACTR2               0.042   phosphatase and actin regulator 2 isoform 1 
CNTROB                0.042   centrobin, centrosomal BRCA2 interacting protein is...
FMN2                  0.035   formin 2 
RCOR3                 0.035   REST corepressor 3 isoform a 
RCOR3                 0.035   REST corepressor 3 isoform d 
C17orf59              0.035   hypothetical protein LOC54785 
KIF26B                0.035   kinesin family member 26B 
KDM6B                 0.031   lysine (K)-specific demethylase 6B 
TBC1D12               0.031   TBC1 domain family, member 12 
ARID1A                0.031   AT rich interactive domain 1A isoform a 
ARID1A                0.031   AT rich interactive domain 1A isoform b 
FNDC1                 0.031   fibronectin type III domain containing 1 
C20orf177             0.031   hypothetical protein LOC63939 
B4GALNT4              0.028   beta 1,4-N-acetylgalactosaminyltransferase-transfera...
PJA1                  0.028   praja 1 isoform b 
PJA1                  0.028   praja 1 isoform a 
ODZ2                  0.028   odz, odd Oz/ten-m homolog 2 
ABL1                  0.028   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.028   c-abl oncogene 1, receptor tyrosine kinase isoform b...
PHACTR2               0.028   phosphatase and actin regulator 2 isoform 4 
PHACTR2               0.028   phosphatase and actin regulator 2 isoform 2 
COL24A1               0.028   collagen, type XXIV, alpha 1 
CTCF                  0.028   CCCTC-binding factor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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