Guide to the Human Genome
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Name: HN1 Sequence: fasta or formatted (181aa) NCBI GI: 50345294
Description:

hematological and neurological expressed 1 isoform 2

Referenced in:

Neurons

Other entries for this name:
alt prot [108aa] hematological and neurological expressed 1 isoform 3
alt prot [154aa] hematological and neurological expressed 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         13           2
 C cysteine            4.4          8           1
 D aspartate           3.9          7           1
 E glutamate           6.1         11           2
 F phenylalanine       3.9          7           1
 G glycine             6.6         12           3
 H histidine           2.8          5           1
 I isoleucine          1.1          2           1
 K lysine              4.4          8           2
 L leucine             9.4         17           2
 M methionine          1.7          3           1
 N asparagine          4.4          8           1
 P proline             7.7         14           2
 Q glutamine           3.3          6           1
 R arginine            7.7         14           2
 S serine             13.3         24           2
 T threonine           5.5         10           5
 V valine              3.9          7           1
 W tryptophan          2.8          5           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hematological and neurological expressed 1 isoform 2... 
HN1                   0.490   hematological and neurological expressed 1 isoform 1 ...
HN1                   0.227   hematological and neurological expressed 1 isoform 3...
HN1L                  0.056   hematological and neurological expressed 1-like [Hom...
PJA1                  0.022   praja 1 isoform b 
PJA1                  0.022   praja 1 isoform a 
KIAA0467              0.017   hypothetical protein LOC23334 
SUPT6H                0.017   suppressor of Ty 6 homolog 
PLA2G15               0.014   lysophospholipase 3 (lysosomal phospholipase A2) [Hom...
IL28RA                0.014   interleukin 28 receptor, alpha isoform 1 
IL28RA                0.014   interleukin 28 receptor, alpha isoform 2 
PARD3                 0.014   partitioning-defective protein 3 homolog 
FNDC1                 0.011   fibronectin type III domain containing 1 
MAMDC4                0.011   apical early endosomal glycoprotein precursor [Homo...
NOTCH3                0.011   Notch homolog 3 
FAM160A2              0.011   hypothetical protein LOC84067 isoform 1 
MARCH10               0.011   ring finger protein 190 
ZAN                   0.011   zonadhesin isoform 3 
MARCH10               0.011   ring finger protein 190 
ZAN                   0.011   zonadhesin isoform 6 
CEP170                0.011   centrosomal protein 170kDa isoform alpha 
BMX                   0.008   BMX non-receptor tyrosine kinase 
BMX                   0.008   BMX non-receptor tyrosine kinase 
ZNF414                0.008   zinc finger protein 414 isoform 1 
ADAMTSL3              0.008   ADAMTS-like 3 precursor 
TNKS1BP1              0.008   tankyrase 1-binding protein 1 
FAM179B               0.008   hypothetical protein LOC23116 
LOC100133554          0.008   PREDICTED: hypothetical protein 
LOC100133554          0.008   PREDICTED: hypothetical protein 
ADNP                  0.008   activity-dependent neuroprotector 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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