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Search of human proteins with 21687032
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21687032 hypothetical protein LOC122258 [Homo sapiens]
(195 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21687032 hypothetical protein LOC122258 [Homo sapiens] 392 e-109
gi|54792138 helicase with zinc finger domain [Homo sapiens] 32 0.34
gi|7705971 leucine zipper protein 4 [Homo sapiens] 32 0.45
gi|94536793 tubulin tyrosine ligase-like family, member 7 [Homo ... 31 0.76
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 31 0.76
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 30 1.00
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 30 1.00
gi|49472835 bridging integrator 2 [Homo sapiens] 30 1.00
gi|83367077 mucin 16 [Homo sapiens] 30 1.3
gi|217330568 EH domain binding protein 1 isoform 1 [Homo sapiens] 30 1.3
gi|16975496 cortactin binding protein 2 [Homo sapiens] 30 1.7
gi|13186249 fibroblast growth factor receptor 1 isoform 9 precur... 29 2.2
gi|116063558 tet oncogene family member 2 isoform b [Homo sapiens] 29 2.2
gi|187761317 tet oncogene family member 2 isoform a [Homo sapiens] 29 2.2
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens] 29 2.2
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 29 2.2
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 29 2.2
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 29 2.2
gi|17978469 cyclin T2 isoform b [Homo sapiens] 29 2.9
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu... 28 3.8
gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre... 28 3.8
gi|239756999 PREDICTED: ankyrin repeat domain 62 [Homo sapiens] 28 3.8
gi|239751514 PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo... 28 3.8
gi|239746016 PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo... 28 3.8
gi|32699015 zinc finger protein 454 [Homo sapiens] 28 3.8
gi|145312267 transcription factor 4 isoform a [Homo sapiens] 28 4.9
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 28 4.9
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 28 4.9
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 28 4.9
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 28 4.9
>gi|21687032 hypothetical protein LOC122258 [Homo sapiens]
Length = 195
Score = 392 bits (1006), Expect = e-109
Identities = 195/195 (100%), Positives = 195/195 (100%)
Query: 1 MAVSQGDGTLCFVLLLCCWQETELRPRTVIPGSPTEIPFSSKQEDMSELLDEILVQEILD 60
MAVSQGDGTLCFVLLLCCWQETELRPRTVIPGSPTEIPFSSKQEDMSELLDEILVQEILD
Sbjct: 1 MAVSQGDGTLCFVLLLCCWQETELRPRTVIPGSPTEIPFSSKQEDMSELLDEILVQEILD 60
Query: 61 LNKTTPSEMPSTASTLSTPLHAGIDENYQAGGSENYHELLENLQFSPGIEDKISNDEANA 120
LNKTTPSEMPSTASTLSTPLHAGIDENYQAGGSENYHELLENLQFSPGIEDKISNDEANA
Sbjct: 61 LNKTTPSEMPSTASTLSTPLHAGIDENYQAGGSENYHELLENLQFSPGIEDKISNDEANA 120
Query: 121 NANLHGDPSENYRGPQVSPGSEKSVSSKEKNSKNTQYENLSILDQILQNIGRSSGNIFHK 180
NANLHGDPSENYRGPQVSPGSEKSVSSKEKNSKNTQYENLSILDQILQNIGRSSGNIFHK
Sbjct: 121 NANLHGDPSENYRGPQVSPGSEKSVSSKEKNSKNTQYENLSILDQILQNIGRSSGNIFHK 180
Query: 181 EQQRTSAQRRSQGSQ 195
EQQRTSAQRRSQGSQ
Sbjct: 181 EQQRTSAQRRSQGSQ 195
>gi|54792138 helicase with zinc finger domain [Homo sapiens]
Length = 1942
Score = 32.0 bits (71), Expect = 0.34
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 66 PSEMPSTASTLSTPLHAGIDENYQAGGSENYHELLENLQFSPGIEDKISNDEANAN---A 122
P E+ + T+ P EN + S NY L QF P + +K + AN++ +
Sbjct: 1827 PRELIAPPKTVKPPEDQLKSENLEVSSSFNYSVLQHLGQFPPLMPNKQIAESANSSSPQS 1886
Query: 123 NLHGDPSENYRGPQVSPGSEKSVSSKEKNSKNTQYENLSILDQILQNIGRSSGN 176
+ G P+ +Y +P + + K S + LS+ ++ ++G SSG+
Sbjct: 1887 SAGGKPAMSYASALRAPPKPRPPPEQAKKSS----DPLSLFQEL--SLGSSSGS 1934
>gi|7705971 leucine zipper protein 4 [Homo sapiens]
Length = 313
Score = 31.6 bits (70), Expect = 0.45
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Query: 66 PSEMPSTASTLSTPLHAG-------IDENYQAGGSENYHELLENLQFSPGIEDKISNDEA 118
PS+ PS + PL+ +NY+A +N + N S G DK +
Sbjct: 92 PSQKPSGFKSGQHPLNGQPLIEQEKCSDNYEAQAEKNQGQSEGNQHQSEGNPDKSEESQG 151
Query: 119 NANANLHGDPSENYRGPQVSPGSEKSVSSKEKNSKNTQYENLSILDQILQNIGRSSGNIF 178
N H + S N+ +S S++S +++ + QYE Q ++ G+S +
Sbjct: 152 QPEENHHSERSRNHLERSLSQ-SDRSQGQLKRH--HPQYERSH--GQYKRSHGQSERSHG 206
Query: 179 HKEQQRTSAQR 189
H E+ ++R
Sbjct: 207 HSERSHGHSER 217
>gi|94536793 tubulin tyrosine ligase-like family, member 7 [Homo
sapiens]
Length = 887
Score = 30.8 bits (68), Expect = 0.76
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 15/112 (13%)
Query: 42 KQEDMSELLDEILVQEILDLNKTTPS-------EMPSTASTLSTPLHAGIDENYQAGGSE 94
K+ED+ +LL++ + + + KTT + MP + + P + D +Y + S
Sbjct: 500 KEEDILDLLEQCEIDDEKLMGKTTKTRGPKPLCSMPESTEIMKRPKYCSSDSSYDSSSSS 559
Query: 95 NYHELLENLQFSPGIEDKISNDEANANANLHGDPSENYRGPQVSPGSEKSVS 146
+ + E +++ N + + PS +Y+ Q +SVS
Sbjct: 560 SESDENE--------KEEYQNKKREKQVTYNLKPSNHYKLIQQPSSIRRSVS 603
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 30.8 bits (68), Expect = 0.76
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 8/161 (4%)
Query: 36 EIPFSSKQEDMSELLDEILVQEILDLNKTTPSEMPSTASTLSTPLHAGIDENYQ--AGGS 93
E S+ Q +SEL DEI E L T + A L AG D Y+ +G
Sbjct: 443 EKKISAAQTRLSELHDEIEKAEQQILRATEEFKQLEEAIQLKKISEAGKDLLYKQLSGRL 502
Query: 94 ENYHELLEN-----LQFSPGIEDKISNDEANANANLHGDPSENYRGPQVSPGSEKSVSSK 148
+ ++L + LQ ++ + + + D ++ ++KS +
Sbjct: 503 QLVNKLRQEALDLELQMEKQKQEIAGKQKEIKDLQIAIDSLDSKDPKHSHMKAQKSGKEQ 562
Query: 149 EKNSKNTQYENL-SILDQILQNIGRSSGNIFHKEQQRTSAQ 188
+ + N QY+ L S LD+IL I + + I E+Q T Q
Sbjct: 563 QLDIMNKQYQQLESRLDEILSRIAKETEEIKDLEEQLTEGQ 603
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 30.4 bits (67), Expect = 1.00
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 71 STASTLSTPLHAGIDENYQAGGSENYHELLENLQFSPGIEDKISNDEANANANLHGDPSE 130
S + +TP +A ++E GG N E +E I +E++ + G +
Sbjct: 83 SECNMCNTPKYAKLEERTGYGGGFNERENVE----------YIEREESDGEYDEFGRKKK 132
Query: 131 NYRGPQVSPGS-EKSVSSKE-KNSKNTQYENLS 161
YRG V P S K V KE + + + E+LS
Sbjct: 133 KYRGKAVGPASILKEVEDKESEGEEEDEDEDLS 165
>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
Length = 320
Score = 30.4 bits (67), Expect = 1.00
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 71 STASTLSTPLHAGIDENYQAGGSENYHELLENLQFSPGIEDKISNDEANANANLHGDPSE 130
S + +TP +A ++E GG N E +E I +E++ + G +
Sbjct: 83 SECNMCNTPKYAKLEERTGYGGGFNERENVE----------YIEREESDGEYDEFGRKKK 132
Query: 131 NYRGPQVSPGS-EKSVSSKE-KNSKNTQYENLS 161
YRG V P S K V KE + + + E+LS
Sbjct: 133 KYRGKAVGPASILKEVEDKESEGEEEDEDEDLS 165
>gi|49472835 bridging integrator 2 [Homo sapiens]
Length = 565
Score = 30.4 bits (67), Expect = 1.00
Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 13/134 (9%)
Query: 63 KTTPSEMPSTASTLSTPLHAG--IDENYQAGGSENYHELLENLQFSPGIEDK---ISNDE 117
+ T S PS+ + S+P +G + +A +L+ SP E + E
Sbjct: 421 RATASPRPSSGNIPSSPTASGGGSPTSPRASLGTGTASPRTSLEVSPNPEPPEKPVRTPE 480
Query: 118 ANANANLHG-DPSENYRGPQV-------SPGSEKSVSSKEKNSKNTQYENLSILDQILQN 169
A N N+H +P E P + PG K + KEK++K + DQ+ +
Sbjct: 481 AKENENIHNQNPEELCTSPTLMTSQVASEPGEAKKMEDKEKDNKLISANSSEGQDQLQVS 540
Query: 170 IGRSSGNIFHKEQQ 183
+ + N+ E Q
Sbjct: 541 MVPENNNLTAPEPQ 554
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 30.0 bits (66), Expect = 1.3
Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 7/114 (6%)
Query: 26 PRTVIPGSPTEIPFSSKQEDMSELLDEILVQEILDLNKTTPSEMPSTASTLSTPLHAGID 85
P V SP IP S ++ LL +LV L T+P + S+ LS+P +
Sbjct: 5642 PSPVSSTSPESIP--SSPLPVTALLTSVLVTTTNVLGTTSPEPVTSSPPNLSSPTQERLT 5699
Query: 86 ENYQAGGSENYHELLENLQFSPGIEDKISNDEANANANLHGDPSENYRGPQVSP 139
+E H + + IS E+ ++ P++++ SP
Sbjct: 5700 TYKDTAHTEAMHASMHTNTAVANVGTSISGHESQSSV-----PADSHTSKATSP 5748
>gi|217330568 EH domain binding protein 1 isoform 1 [Homo sapiens]
Length = 1231
Score = 30.0 bits (66), Expect = 1.3
Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 18/134 (13%)
Query: 40 SSKQEDMSELLDEILVQEILDLNKTTPSEMPSTASTLSTPLHA--GIDENYQ-------- 89
S KQ D+ L D E D N+ E + + + L+A +DE+
Sbjct: 177 SMKQADIGNLDDFEEDNEDDDENRVNQEEKAAKITEIVNQLNALSSLDEDQDDCIKQANM 236
Query: 90 --AGGSENYHELLENLQFSPGIEDKISNDEANANANLHGDPSENYRGPQVSPGSEKSV-- 145
A + + EL+ L F D+ D A N+N DP P P SE+ +
Sbjct: 237 RSAKSASSSEELINKLNFL----DEAEKDLATVNSNPFDDPDAAELNPFGDPDSEEPITE 292
Query: 146 SSKEKNSKNTQYEN 159
++ + ++++ Y N
Sbjct: 293 TASPRKTEDSFYNN 306
>gi|16975496 cortactin binding protein 2 [Homo sapiens]
Length = 1663
Score = 29.6 bits (65), Expect = 1.7
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Query: 60 DLNKTTPSEMPSTASTLSTPLHAGIDENYQAGGSENYHELLENLQFSPGIEDKISNDEAN 119
D +TP +PS A+ + +N QA + H N PG+ +I
Sbjct: 393 DPTSSTPP-LPSNAAPPTAQTPGIAPQNSQAPPMHSLHSPCANTSLHPGLNPRIQAARFR 451
Query: 120 ANANLHGDPSENYRGPQVSPGSEKSVSSKE 149
N + DP +N Q P + S +S++
Sbjct: 452 FQGNAN-DPDQNGNTTQSPPSRDVSPTSRD 480
>gi|13186249 fibroblast growth factor receptor 1 isoform 9 precursor
[Homo sapiens]
Length = 785
Score = 29.3 bits (64), Expect = 2.2
Identities = 18/55 (32%), Positives = 24/55 (43%)
Query: 31 PGSPTEIPFSSKQEDMSELLDEILVQEILDLNKTTPSEMPSTASTLSTPLHAGID 85
PG P E F ED+ ++ QE LDL+ PS T S+ +G D
Sbjct: 702 PGVPVEELFKQLVEDLDRIVALTSNQEYLDLSMPLDQYSPSFPDTRSSTCSSGED 756
>gi|116063558 tet oncogene family member 2 isoform b [Homo sapiens]
Length = 1165
Score = 29.3 bits (64), Expect = 2.2
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 20/88 (22%)
Query: 103 LQFSPGIEDKISNDEANANANLHGD-PSENYRGPQVSPGSEKSVSSKEKNSKNTQYENLS 161
LQ+ P + +++++ + N+N+ G P + Y K TQ E+ S
Sbjct: 590 LQYQPNLSNQMTSKQYTGNSNMPGGLPRQAY------------------TQKTTQLEHKS 631
Query: 162 ILDQILQNIGRSSGNI-FHKEQQRTSAQ 188
+ Q+ N G+S G + H + Q+ S Q
Sbjct: 632 QMYQVEMNQGQSQGTVDQHLQFQKPSHQ 659
>gi|187761317 tet oncogene family member 2 isoform a [Homo sapiens]
Length = 2002
Score = 29.3 bits (64), Expect = 2.2
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 20/88 (22%)
Query: 103 LQFSPGIEDKISNDEANANANLHGD-PSENYRGPQVSPGSEKSVSSKEKNSKNTQYENLS 161
LQ+ P + +++++ + N+N+ G P + Y K TQ E+ S
Sbjct: 590 LQYQPNLSNQMTSKQYTGNSNMPGGLPRQAY------------------TQKTTQLEHKS 631
Query: 162 ILDQILQNIGRSSGNI-FHKEQQRTSAQ 188
+ Q+ N G+S G + H + Q+ S Q
Sbjct: 632 QMYQVEMNQGQSQGTVDQHLQFQKPSHQ 659
>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
Length = 548
Score = 29.3 bits (64), Expect = 2.2
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 19 WQETELRPRTVIPGSPTEIPFSSKQEDMSELLDEILVQEI 58
W + + +TVIPG PT IP +E + ++ ++++
Sbjct: 22 WNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDL 61
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 29.3 bits (64), Expect = 2.2
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 19 WQETELRPRTVIPGSPTEIPFSSKQEDMSELLDEILVQEI 58
W + + +TVIPG PT IP +E + ++ ++++
Sbjct: 22 WNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDL 61
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 29.3 bits (64), Expect = 2.2
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 19 WQETELRPRTVIPGSPTEIPFSSKQEDMSELLDEILVQEI 58
W + + +TVIPG PT IP +E + ++ ++++
Sbjct: 22 WNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDL 61
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 29.3 bits (64), Expect = 2.2
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 60 DLNKTTPSEMPSTASTLSTPLHAGIDENYQA----GGSENYHELLENLQFSPGIEDKISN 115
D++ + + PST+ T+STP + E+ +A + E+ EN + +KI N
Sbjct: 635 DVSLASTPKRPSTSQTVSTPAPVPVIESTEAIEAKAALKQLQEIFENYKKEKAENEKIQN 694
Query: 116 DE 117
++
Sbjct: 695 EQ 696
>gi|17978469 cyclin T2 isoform b [Homo sapiens]
Length = 730
Score = 28.9 bits (63), Expect = 2.9
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 62 NKTTPSEMPSTASTLSTPLHAGIDENYQAGGSENYHELLEN--LQFSPGIE-DKISNDEA 118
+K E PS+ S+ H+ +GGS++ + + L+ G+ D IS+ +
Sbjct: 556 HKEKHKEHPSSRHHTSSHKHSHSHSGSSSGGSKHSADGIPPTVLRSPVGLSSDGISSSSS 615
Query: 119 NANANLHGDPSENYRGPQVSPGSEKSVSSKEKNSKNTQY 157
++ LH + + + ++S S+ S SS +S QY
Sbjct: 616 SSRKRLHVNDASHNHHSKMSKSSKSSGSSSSSSSSVKQY 654
>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
precursor [Homo sapiens]
Length = 513
Score = 28.5 bits (62), Expect = 3.8
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 111 DKISNDEANANANLHGDPSENYRGPQVSPGSEKSVSSKEKNSKNTQYENLS 161
D + + ++ NL + S+N GP E ++SS+E NS +Q E +S
Sbjct: 312 DSKGDSQEDSKENLSQEESQNVDGPSSESSQEANLSSQE-NSSESQEEVVS 361
>gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2
precursor [Homo sapiens]
Length = 497
Score = 28.5 bits (62), Expect = 3.8
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 111 DKISNDEANANANLHGDPSENYRGPQVSPGSEKSVSSKEKNSKNTQYENLS 161
D + + ++ NL + S+N GP E ++SS+E NS +Q E +S
Sbjct: 296 DSKGDSQEDSKENLSQEESQNVDGPSSESSQEANLSSQE-NSSESQEEVVS 345
>gi|239756999 PREDICTED: ankyrin repeat domain 62 [Homo sapiens]
Length = 917
Score = 28.5 bits (62), Expect = 3.8
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 93 SENYHELLENLQFS-PGIEDKIS---NDEANANANLHGDPSENYRGPQVSPGSEKSVSSK 148
SE E LE + S P +E+K+ N + + N+H D S+NY V K + K
Sbjct: 281 SEGEQERLEGCESSQPQVEEKMKKCRNKKMEVSRNVHADDSDNY-NDDVDELIHKIKNRK 339
Query: 149 EKNSKNTQYEN 159
N ++ EN
Sbjct: 340 PDNHQSPGKEN 350
>gi|239751514 PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo
sapiens]
Length = 917
Score = 28.5 bits (62), Expect = 3.8
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 93 SENYHELLENLQFS-PGIEDKIS---NDEANANANLHGDPSENYRGPQVSPGSEKSVSSK 148
SE E LE + S P +E+K+ N + + N+H D S+NY V K + K
Sbjct: 281 SEGEQERLEGCESSQPQVEEKMKKCRNKKMEVSRNVHADDSDNY-NDDVDELIHKIKNRK 339
Query: 149 EKNSKNTQYEN 159
N ++ EN
Sbjct: 340 PDNHQSPGKEN 350
>gi|239746016 PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo
sapiens]
Length = 917
Score = 28.5 bits (62), Expect = 3.8
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 93 SENYHELLENLQFS-PGIEDKIS---NDEANANANLHGDPSENYRGPQVSPGSEKSVSSK 148
SE E LE + S P +E+K+ N + + N+H D S+NY V K + K
Sbjct: 281 SEGEQERLEGCESSQPQVEEKMKKCRNKKMEVSRNVHADDSDNY-NDDVDELIHKIKNRK 339
Query: 149 EKNSKNTQYEN 159
N ++ EN
Sbjct: 340 PDNHQSPGKEN 350
>gi|32699015 zinc finger protein 454 [Homo sapiens]
Length = 522
Score = 28.5 bits (62), Expect = 3.8
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 52 EILVQEILDLNKTTPS-EMPSTASTLSTPLHAGIDENYQAGGSENYHELLE-----NLQF 105
EI +Q ++ + TPS E + ST+S+ LH+ + +Q S+N E E +
Sbjct: 134 EISLQRVVLTHPNTPSQEYDESGSTMSSSLHSDQSQGFQP--SKNAFECSECGKVFSKSS 191
Query: 106 SPGIEDKISNDEANANANLH 125
+ KI N E NAN +H
Sbjct: 192 TLNKHQKIHN-EKNANQKIH 210
>gi|145312267 transcription factor 4 isoform a [Homo sapiens]
Length = 671
Score = 28.1 bits (61), Expect = 4.9
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 101 ENLQFSPGIEDKISNDEANANANLHGDPSENYRGPQVSPGSEKSVSSKEKNSKNTQYENL 160
ENLQ + EDK +D+ ++ S N ++P +K+ KE+ N E L
Sbjct: 521 ENLQDTKSSEDKKLDDDKKDIKSITRSRSSNNDDEDLTP-EQKAEREKERRMANNARERL 579
Query: 161 SILD--QILQNIGR 172
+ D + + +GR
Sbjct: 580 RVRDINEAFKELGR 593
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 28.1 bits (61), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Query: 64 TTPSEMPSTASTLSTP--------LHAGIDENYQAGGSENYHELLENLQFSPGI 109
TTP P T S +STP +H DE+ +E + LEN PG+
Sbjct: 711 TTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGV 764
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 28.1 bits (61), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Query: 64 TTPSEMPSTASTLSTP--------LHAGIDENYQAGGSENYHELLENLQFSPGI 109
TTP P T S +STP +H DE+ +E + LEN PG+
Sbjct: 752 TTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGV 805
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 28.1 bits (61), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Query: 64 TTPSEMPSTASTLSTP--------LHAGIDENYQAGGSENYHELLENLQFSPGI 109
TTP P T S +STP +H DE+ +E + LEN PG+
Sbjct: 804 TTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGV 857
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 28.1 bits (61), Expect = 4.9
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
Query: 64 TTPSEMPSTASTLSTP--------LHAGIDENYQAGGSENYHELLENLQFSPGI 109
TTP P T S +STP +H DE+ +E + LEN PG+
Sbjct: 845 TTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGV 898
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.126 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,825,157
Number of Sequences: 37866
Number of extensions: 353925
Number of successful extensions: 1166
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 1133
Number of HSP's gapped (non-prelim): 74
length of query: 195
length of database: 18,247,518
effective HSP length: 97
effective length of query: 98
effective length of database: 14,574,516
effective search space: 1428302568
effective search space used: 1428302568
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.