Guide to the Human Genome
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Name: CTTNBP2 Sequence: fasta or formatted (1663aa) NCBI GI: 16975496
Description:

cortactin binding protein 2

Referenced in:

Actin and Related Proteins
Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5        141           4
 C cysteine            2.5         42           1
 D aspartate           4.6         76           2
 E glutamate           6.5        108           3
 F phenylalanine       2.2         37           1
 G glycine             5.8         96           2
 H histidine           2.2         37           1
 I isoleucine          3.7         61           4
 K lysine              6.6        109           3
 L leucine            10.1        168           3
 M methionine          1.9         32           2
 N asparagine          5.5         91           3
 P proline             6.8        113           3
 Q glutamine           4.8         79           2
 R arginine            5.1         84           2
 S serine             10.4        173           5
 T threonine           5.4         89           2
 V valine              5.5         92           2
 W tryptophan          1.1         18           2
 Y tyrosine            1.0         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cortactin binding protein 2 
CTTNBP2NL             0.109   CTTNBP2 N-terminal like 
LOC730427             0.028   PREDICTED: similar to neuron navigator 2, partial [...
NAV2                  0.028   neuron navigator 2 isoform 4 
NAV2                  0.028   neuron navigator 2 isoform 3 
NAV2                  0.028   neuron navigator 2 isoform 1 
NAV2                  0.028   neuron navigator 2 isoform 2 
LOC652725             0.027   PREDICTED: similar to neuron navigator 3, partial [...
NAV3                  0.027   neuron navigator 3 
ANK2                  0.026   ankyrin 2 isoform 3 
ANK2                  0.026   ankyrin 2 isoform 2 
ANK2                  0.026   ankyrin 2 isoform 1 
ANK3                  0.025   ankyrin 3 isoform 1 
LOC730426             0.025   PREDICTED: similar to NAV1 protein 
NAV1                  0.025   neuron navigator 1 
ANK1                  0.024   ankyrin 1 isoform 9 
ANK1                  0.024   ankyrin 1 isoform 1 
ANK1                  0.024   ankyrin 1 isoform 3 
ANK1                  0.024   ankyrin 1 isoform 2 
ANK1                  0.024   ankyrin 1 isoform 4 
ANKRD50               0.024   ankyrin repeat domain 50 
ASB13                 0.024   ankyrin repeat and SOCS box-containing protein 13 [H...
FILIP1L               0.023   filamin A interacting protein 1-like isoform 3 [Hom...
FILIP1L               0.023   filamin A interacting protein 1-like isoform 1 [Hom...
ANKRD44               0.023   ankyrin repeat domain 44 
CASKIN2               0.022   cask-interacting protein 2 isoform a 
MIB1                  0.022   mindbomb homolog 1 
ANKRD52               0.022   ankyrin repeat domain 52 
FILIP1                0.022   filamin A interacting protein 1 
RIPK4                 0.022   ankyrin repeat domain 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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