Guide to the Human Genome
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Name: ANKRD62 Sequence: fasta or formatted (917aa) NCBI GI: 239756999
Description:

PREDICTED: ankyrin repeat domain 62

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [917aa] PREDICTED: ankyrin repeat domain 62 isoform 1
alt mRNA [917aa] PREDICTED: ankyrin repeat domain 62 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         50           3
 C cysteine            2.4         22           1
 D aspartate           6.2         57           2
 E glutamate          10.8         99           3
 F phenylalanine       1.7         16           1
 G glycine             3.1         28           1
 H histidine           2.3         21           1
 I isoleucine          4.6         42           2
 K lysine              9.6         88           3
 L leucine            10.6         97           3
 M methionine          2.9         27           1
 N asparagine          6.3         58           2
 P proline             1.0          9           1
 Q glutamine           7.3         67           3
 R arginine            6.8         62           3
 S serine              7.3         67           2
 T threonine           4.6         42           1
 V valine              4.4         40           2
 W tryptophan          0.4          4           1
 Y tyrosine            2.3         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: ankyrin repeat domain 62 
ANKRD62               1.000   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
ANKRD62               0.996   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
ANKRD26               0.325   ankyrin repeat domain 26 
LOC400986             0.293   PREDICTED: protein immuno-reactive with anti-PTH po...
LOC400986             0.292   PREDICTED: protein immuno-reactive with anti-PTH po...
ANKRD36B              0.286   ankyrin repeat domain 36B 
ANKRD36               0.282   PREDICTED: ankyrin repeat domain 36 
ANKRD20A3             0.251   ankyrin repeat domain 20 family, member A3 
ANKRD20A2             0.250   ankyrin repeat domain 20 family, member A2 
ANKRD20A4             0.250   ankyrin repeat domain 20 family, member A4 
ANKRD20A1             0.250   ankyrin repeat domain 20 family, member A1 
ANKRD20A5             0.243   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD20A5             0.243   PREDICTED: ankyrin repeat domain 20 family, member ...
LOC730658             0.238   PREDICTED: similar to UPF0634 protein KIAA1641 [Hom...
CCDC144A              0.234   coiled-coil domain containing 144A 
POTEA                 0.201   POTE ankyrin domain family, member A isoform 2 [Homo...
LOC653781             0.184   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.183   PREDICTED: similar to protein expressed in prostate,...
POTEF                 0.181   prostate, ovary, testis expressed protein on chromo...
POTEE                 0.181   protein expressed in prostate, ovary, testis, and p...
ANKRD30A              0.171   ankyrin repeat domain 30A 
ANKRD30B              0.162   ankyrin repeat domain 30B 
POTEA                 0.160   POTE ankyrin domain family, member A isoform 1 [Homo...
POTEB                 0.156   protein expressed in prostate, ovary, testis, and pl...
LOC100287399          0.155   PREDICTED: hypothetical protein XP_002343353 
LOC100288966          0.154   PREDICTED: hypothetical protein XP_002343915 isofor...
LOC100288966          0.154   PREDICTED: hypothetical protein XP_002343914 isofor...
POTED                 0.154   pote protein 
POTEC                 0.151   ANKRD26-like family B, member 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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