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Search of human proteins with 216548564
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|216548564 hypothetical protein LOC51093 isoform 2 [Homo
sapiens]
(277 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|216548564 hypothetical protein LOC51093 isoform 2 [Homo sapiens] 563 e-161
gi|216548560 hypothetical protein LOC51093 isoform 1 [Homo sapiens] 425 e-119
gi|39930471 hypothetical protein LOC84190 [Homo sapiens] 61 1e-09
gi|68448528 mesothelin-like [Homo sapiens] 40 0.002
gi|24497554 homeobox A13 [Homo sapiens] 36 0.032
gi|91208420 bassoon protein [Homo sapiens] 36 0.032
gi|157676331 hyaluronan binding protein 4 [Homo sapiens] 35 0.072
gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens] 34 0.12
gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens] 34 0.12
gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo sapiens] 34 0.12
gi|37595548 phosphoinositol 3-phosphate-binding protein-3 [Homo ... 34 0.12
gi|11119430 testis-specific kinase substrate [Homo sapiens] 34 0.16
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 34 0.16
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 34 0.16
gi|194363725 SWI/SNF-related matrix-associated actin-dependent r... 34 0.16
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 33 0.21
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 33 0.21
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 32 0.47
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 32 0.47
gi|170932550 FLT3-interacting zinc finger 1 [Homo sapiens] 32 0.47
gi|33356148 formin-like 1 [Homo sapiens] 32 0.47
gi|239756517 PREDICTED: hypothetical protein [Homo sapiens] 32 0.61
gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo ... 32 0.61
gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo ... 32 0.61
gi|50843837 hypothetical protein LOC55701 [Homo sapiens] 32 0.61
gi|47271475 SPOC domain containing 1 [Homo sapiens] 32 0.61
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 32 0.80
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 32 0.80
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ... 32 0.80
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ... 32 0.80
>gi|216548564 hypothetical protein LOC51093 isoform 2 [Homo sapiens]
Length = 277
Score = 563 bits (1451), Expect = e-161
Identities = 277/277 (100%), Positives = 277/277 (100%)
Query: 1 MPGISARGLSHEGRKQLAVNLTRVLALYRSILDAYIIEFFTDNLWDTLPCSWQEALDGLK 60
MPGISARGLSHEGRKQLAVNLTRVLALYRSILDAYIIEFFTDNLWDTLPCSWQEALDGLK
Sbjct: 1 MPGISARGLSHEGRKQLAVNLTRVLALYRSILDAYIIEFFTDNLWDTLPCSWQEALDGLK 60
Query: 61 PPQLATMLLGMPGEGEVVRYRSVWPLTLLALKSTACALAFTRMPGFQTPSEFLENPSQSS 120
PPQLATMLLGMPGEGEVVRYRSVWPLTLLALKSTACALAFTRMPGFQTPSEFLENPSQSS
Sbjct: 61 PPQLATMLLGMPGEGEVVRYRSVWPLTLLALKSTACALAFTRMPGFQTPSEFLENPSQSS 120
Query: 121 RLTAPFRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSGQGHLSRFMALGLGLMVK 180
RLTAPFRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSGQGHLSRFMALGLGLMVK
Sbjct: 121 RLTAPFRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSGQGHLSRFMALGLGLMVK 180
Query: 181 SIEGDQRLVERAQRLDQELLQALEKEEKRNPQICAAGATASGARSPAATESGCPSGPRGP 240
SIEGDQRLVERAQRLDQELLQALEKEEKRNPQICAAGATASGARSPAATESGCPSGPRGP
Sbjct: 181 SIEGDQRLVERAQRLDQELLQALEKEEKRNPQICAAGATASGARSPAATESGCPSGPRGP 240
Query: 241 GEPCGGLLQPGSTACPTGGDAYSTGPAAVPSGTGFPC 277
GEPCGGLLQPGSTACPTGGDAYSTGPAAVPSGTGFPC
Sbjct: 241 GEPCGGLLQPGSTACPTGGDAYSTGPAAVPSGTGFPC 277
>gi|216548560 hypothetical protein LOC51093 isoform 1 [Homo sapiens]
Length = 475
Score = 425 bits (1093), Expect = e-119
Identities = 212/213 (99%), Positives = 213/213 (100%)
Query: 1 MPGISARGLSHEGRKQLAVNLTRVLALYRSILDAYIIEFFTDNLWDTLPCSWQEALDGLK 60
MPGISARGLSHEGRKQLAVNLTRVLALYRSILDAYIIEFFTDNLWDTLPCSWQEALDGLK
Sbjct: 1 MPGISARGLSHEGRKQLAVNLTRVLALYRSILDAYIIEFFTDNLWDTLPCSWQEALDGLK 60
Query: 61 PPQLATMLLGMPGEGEVVRYRSVWPLTLLALKSTACALAFTRMPGFQTPSEFLENPSQSS 120
PPQLATMLLGMPGEGEVVRYRSVWPLTLLALKSTACALAFTRMPGFQTPSEFLENPSQSS
Sbjct: 61 PPQLATMLLGMPGEGEVVRYRSVWPLTLLALKSTACALAFTRMPGFQTPSEFLENPSQSS 120
Query: 121 RLTAPFRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSGQGHLSRFMALGLGLMVK 180
RLTAPFRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSGQGHLSRFMALGLGLMVK
Sbjct: 121 RLTAPFRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSGQGHLSRFMALGLGLMVK 180
Query: 181 SIEGDQRLVERAQRLDQELLQALEKEEKRNPQI 213
SIEGDQRLVERAQRLDQELLQALEKEEKRNPQ+
Sbjct: 181 SIEGDQRLVERAQRLDQELLQALEKEEKRNPQV 213
>gi|39930471 hypothetical protein LOC84190 [Homo sapiens]
Length = 603
Score = 60.8 bits (146), Expect = 1e-09
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 29/194 (14%)
Query: 30 SILDAYIIEFFTDNLWDTL--------------PCSWQEALDGLKPPQLATMLLGMPGEG 75
SI +A+ ++F+T+++W+ L S EAL P L+ E
Sbjct: 32 SISNAHTVDFYTESVWEELVDLPPETVLAALRKSASETEAL-----PSETRPLVEAEWEA 86
Query: 76 EVVRYRSVWPLT---LLALKSTACALAFTRMP--GFQTPSEFL-----ENPSQSSRLTAP 125
+ + ++ T L+++++ A A + + G TP E L N +Q
Sbjct: 87 GMTDFPKIFCETSQKLVSVEAFALAAKYYSVQNLGICTPFEQLLVALRGNQNQRIGENQK 146
Query: 126 FRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSGQGHLSRFMALGLGLMVKSIEGD 185
+ + KK HE++ + EL+ ++D+ G QV+D+GSG+G+LS F++L GL V I+
Sbjct: 147 AVEFMNMKKSHEVQAMSELISSIADYYGIKQVIDLGSGKGYLSSFLSLKYGLKVYGIDSS 206
Query: 186 QRLVERAQRLDQEL 199
A+ +++L
Sbjct: 207 NTNTHGAEERNRKL 220
>gi|68448528 mesothelin-like [Homo sapiens]
Length = 1053
Score = 40.4 bits (93), Expect = 0.002
Identities = 59/203 (29%), Positives = 80/203 (39%), Gaps = 23/203 (11%)
Query: 58 GLKPPQLATMLLGMPGEGEVVRYRSVWPLTLLALKSTACALA--FTRMPGFQTPSEFL-E 114
GL+PPQ G GE V R R L+ LA ++ C L FT P P+ L
Sbjct: 392 GLRPPQRGRAPTGCHGESRVTRERRSAQLSCLANLASRCGLQDDFTLHP----PNLLLFY 447
Query: 115 NPSQSSRLTAPFRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSGQGHLSRF-MAL 173
N SQ A R +R Q ++ L L + VG+G G +L
Sbjct: 448 NLSQVRE--ADCRAFIRRAAQGDVELLSHLPDQRVALWRAAVACLVGAGWGWARCIGGSL 505
Query: 174 GLGLMVKSIEGDQRLVERAQRLDQELLQALEKEEKRNPQICAAGATASGARSPAATES-- 231
LG + +++G RL R DQ+LL AL +C A++ GA P E+
Sbjct: 506 PLGADLLALQGVARL--RLSASDQQLLGAL---------VCDMDASSIGAADPHMLENLR 554
Query: 232 GCPSGPRGPGEPCGGLLQPGSTA 254
CP LL G T+
Sbjct: 555 RCPRLTAAQRIALNSLLAGGKTS 577
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 36.2 bits (82), Expect = 0.032
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 215 AAGATASGARSPAATESGCPSGPRGPGEPCGGLLQPGSTACPTGGDAYSTGPAAVPSG 272
AA A A+ A + AA + SG GP P G + C + S+GPAA+P G
Sbjct: 116 AAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSAAAQS-SSGPAALPYG 172
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 36.2 bits (82), Expect = 0.032
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 201 QALEKEEKRNPQICAAGATASGARSPA---ATESGCPSGPRGPGEPCGGLLQPGSTACP 256
+A+E+ +K P+ + S R P A+E P P G P GG L PG CP
Sbjct: 3471 EAVERLQKAGPKPSSLSMAHSRVRPPMRSQASEEESPVSPLGRPRPAGGPLPPGGDTCP 3529
>gi|157676331 hyaluronan binding protein 4 [Homo sapiens]
Length = 413
Score = 35.0 bits (79), Expect = 0.072
Identities = 30/103 (29%), Positives = 40/103 (38%), Gaps = 23/103 (22%)
Query: 188 LVERAQRLDQELLQALEKEEKRNPQICAAGATASGARSPAATESGCPSGPRG-------- 239
++ A+R Q+ LQ ++R+ AAGA G RSPA SG +G G
Sbjct: 41 ILREAERRRQQQLQ----RKRRDEAAAAAGAGPRGGRSPAGA-SGHRAGAGGRRESQKER 95
Query: 240 ----------PGEPCGGLLQPGSTACPTGGDAYSTGPAAVPSG 272
P P GGL PG P G+ + P G
Sbjct: 96 KSLPAPVAQRPDSPGGGLQAPGQKRTPRRGEQQGWNDSRGPEG 138
>gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens]
Length = 170
Score = 34.3 bits (77), Expect = 0.12
Identities = 29/77 (37%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 202 ALEKEEKRNPQICAAGATASGARSP----AATESGCPSGPRGPGEPC--GGLLQPGSTAC 255
A E R P A A A+GA +P A + P+GP PGEP G L +P
Sbjct: 32 AASPEPARAPPEPAPPAEATGAPAPSRPCAPEPAASPAGPEEPGEPAGLGELGEPAGPGE 91
Query: 256 PTG-GDAYSTGPAAVPS 271
P G GD PAA P+
Sbjct: 92 PEGPGD-----PAAAPA 103
>gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens]
Length = 177
Score = 34.3 bits (77), Expect = 0.12
Identities = 29/77 (37%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 202 ALEKEEKRNPQICAAGATASGARSP----AATESGCPSGPRGPGEPC--GGLLQPGSTAC 255
A E R P A A A+GA +P A + P+GP PGEP G L +P
Sbjct: 32 AASPEPARAPPEPAPPAEATGAPAPSRPCAPEPAASPAGPEEPGEPAGLGELGEPAGPGE 91
Query: 256 PTG-GDAYSTGPAAVPS 271
P G GD PAA P+
Sbjct: 92 PEGPGD-----PAAAPA 103
>gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo sapiens]
Length = 204
Score = 34.3 bits (77), Expect = 0.12
Identities = 29/77 (37%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 202 ALEKEEKRNPQICAAGATASGARSP----AATESGCPSGPRGPGEPC--GGLLQPGSTAC 255
A E R P A A A+GA +P A + P+GP PGEP G L +P
Sbjct: 32 AASPEPARAPPEPAPPAEATGAPAPSRPCAPEPAASPAGPEEPGEPAGLGELGEPAGPGE 91
Query: 256 PTG-GDAYSTGPAAVPS 271
P G GD PAA P+
Sbjct: 92 PEGPGD-----PAAAPA 103
>gi|37595548 phosphoinositol 3-phosphate-binding protein-3 [Homo
sapiens]
Length = 1048
Score = 34.3 bits (77), Expect = 0.12
Identities = 35/103 (33%), Positives = 43/103 (41%), Gaps = 22/103 (21%)
Query: 183 EGDQRLVERAQRLDQELLQALEKEEKRNPQICAAGATASGARSPAATESGCPSGPRGPG- 241
EGD R E+A+R + E K+ P + A G A G + S P GPR PG
Sbjct: 210 EGDGRGCEKAERRPER------PEVKKEPPVKANGLPA-GPEPASEPGSPYPEGPRVPGG 262
Query: 242 -----EPCG----GLLQPGSTACP-----TGGDAYSTGPAAVP 270
+P G +PGSTA P TGG S P P
Sbjct: 263 GEQPAQPNGWQYHSPSRPGSTAFPSQDGETGGHRRSFPPRTNP 305
Score = 29.6 bits (65), Expect = 3.0
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 197 QELLQALEKEEKRNPQICAAGATASGARSPAATESGCPSGPRGPGEPCGGLLQPGSTACP 256
Q+ L+++EKR CA AS + + PS P P P P S+ P
Sbjct: 979 QDSESQLQEQEKRIEISCALATEASRRGRMLSVQCATPSPPTSPASPAPP-ANPLSSESP 1037
Query: 257 TGGDAYST 264
G D+ T
Sbjct: 1038 RGADSSYT 1045
>gi|11119430 testis-specific kinase substrate [Homo sapiens]
Length = 592
Score = 33.9 bits (76), Expect = 0.16
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 197 QELLQALEKEEKRNPQICAAGATASGARSPAATESGCPSGPRGPGEPC--GGLLQPGSTA 254
QE + E EEK+ P+ + + PAAT GCP P P +P GL+ G
Sbjct: 250 QEPEEKQEPEEKQKPE----AGLSWNSLGPAATSQGCPGPPGSPDKPSRPHGLVPAGWGM 305
Query: 255 CPTGGD 260
P G+
Sbjct: 306 GPRAGE 311
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 33.9 bits (76), Expect = 0.16
Identities = 33/99 (33%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Query: 186 QRLVERAQRLDQELLQALEKEEKRNPQICAAG-------ATASGARSPAATESGCPSGPR 238
Q+ ++ + Q+ AL + P AAG A A + PA SG P G
Sbjct: 979 QQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSL 1038
Query: 239 GPGEPCGGLLQPGSTACPTGGD-AYSTGPAAVPSGTGFP 276
GP E G Q GSTA P A + P AVP G P
Sbjct: 1039 GPSEQIG---QAGSTAGPQQQQPAGAPQPGAVPPGVPPP 1074
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 33.9 bits (76), Expect = 0.16
Identities = 33/99 (33%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Query: 186 QRLVERAQRLDQELLQALEKEEKRNPQICAAG-------ATASGARSPAATESGCPSGPR 238
Q+ ++ + Q+ AL + P AAG A A + PA SG P G
Sbjct: 948 QQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSL 1007
Query: 239 GPGEPCGGLLQPGSTACPTGGD-AYSTGPAAVPSGTGFP 276
GP E G Q GSTA P A + P AVP G P
Sbjct: 1008 GPSEQIG---QAGSTAGPQQQQPAGAPQPGAVPPGVPPP 1043
>gi|194363725 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform c [Homo sapiens]
Length = 1152
Score = 33.9 bits (76), Expect = 0.16
Identities = 33/99 (33%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Query: 186 QRLVERAQRLDQELLQALEKEEKRNPQICAAG-------ATASGARSPAATESGCPSGPR 238
Q+ ++ + Q+ AL + P AAG A A + PA SG P G
Sbjct: 979 QQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSL 1038
Query: 239 GPGEPCGGLLQPGSTACPTGGD-AYSTGPAAVPSGTGFP 276
GP E G Q GSTA P A + P AVP G P
Sbjct: 1039 GPSEQIG---QAGSTAGPQQQQPAGAPQPGAVPPGVPPP 1074
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 33.5 bits (75), Expect = 0.21
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 12/62 (19%)
Query: 222 GARSPAATESGCPSGPRGPGEPCGGLLQPGSTACP-------TGGDAYSTGPAAVPSGTG 274
GA PA PSGPRGP P G + G+ P G + TGPA P G
Sbjct: 1152 GASGPAG-----PSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPG 1206
Query: 275 FP 276
P
Sbjct: 1207 PP 1208
Score = 30.8 bits (68), Expect = 1.4
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 9/66 (13%)
Query: 218 ATASGARSPAATESGCPSGPRGPGEPCGGLLQPGS-----TACPTG--GDAYSTGPAAVP 270
A A+GAR P+GP GP P GG PG+ A PTG G + GP P
Sbjct: 338 AGAAGARGNDGQPG--PAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEP 395
Query: 271 SGTGFP 276
G P
Sbjct: 396 GTPGSP 401
Score = 28.5 bits (62), Expect = 6.7
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 234 PSGPRGPGEPCGGLLQPGSTACPTGGDAYSTGPAAVPSGTGFP 276
P GPRGP P G G P G A GP GFP
Sbjct: 238 PMGPRGPPGPPGKPGDDGEAGKP--GKAGERGPPGPQGARGFP 278
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 33.5 bits (75), Expect = 0.21
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 12/62 (19%)
Query: 222 GARSPAATESGCPSGPRGPGEPCGGLLQPGSTACP-------TGGDAYSTGPAAVPSGTG 274
GA PA PSGPRGP P G + G+ P G + TGPA P G
Sbjct: 1083 GASGPAG-----PSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPG 1137
Query: 275 FP 276
P
Sbjct: 1138 PP 1139
Score = 30.8 bits (68), Expect = 1.4
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 9/66 (13%)
Query: 218 ATASGARSPAATESGCPSGPRGPGEPCGGLLQPGS-----TACPTG--GDAYSTGPAAVP 270
A A+GAR P+GP GP P GG PG+ A PTG G + GP P
Sbjct: 269 AGAAGARGNDGQPG--PAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEP 326
Query: 271 SGTGFP 276
G P
Sbjct: 327 GTPGSP 332
Score = 28.5 bits (62), Expect = 6.7
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 234 PSGPRGPGEPCGGLLQPGSTACPTGGDAYSTGPAAVPSGTGFP 276
P GPRGP P G G P G A GP GFP
Sbjct: 169 PMGPRGPPGPPGKPGDDGEAGKP--GKAGERGPPGPQGARGFP 209
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 32.3 bits (72), Expect = 0.47
Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 191 RAQRLDQELLQALEKEEKRNPQICAAGATASGAR-SPAATESGCPSGPRGPGEPCGGLL- 248
R QR + +L++E KR P CA + A AR PAA G P+ P P G
Sbjct: 381 RRQRPRRLPRASLQEEPKRRPP-CARPSGAGPAREGPAAWPGGAPTPPH--ARPTGRRQD 437
Query: 249 -QPGSTACPTGGDAYSTGPAAVPSGTGF 275
+PG A P GG A S A +G G+
Sbjct: 438 PEPGPRA-PRGGPASSGWHAGSAAGRGW 464
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 32.3 bits (72), Expect = 0.47
Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 191 RAQRLDQELLQALEKEEKRNPQICAAGATASGAR-SPAATESGCPSGPRGPGEPCGGLL- 248
R QR + +L++E KR P CA + A AR PAA G P+ P P G
Sbjct: 381 RRQRPRRLPRASLQEEPKRRPP-CARPSGAGPAREGPAAWPGGAPTPPH--ARPTGRRQD 437
Query: 249 -QPGSTACPTGGDAYSTGPAAVPSGTGF 275
+PG A P GG A S A +G G+
Sbjct: 438 PEPGPRA-PRGGPASSGWHAGSAAGRGW 464
>gi|170932550 FLT3-interacting zinc finger 1 [Homo sapiens]
Length = 496
Score = 32.3 bits (72), Expect = 0.47
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 211 PQICAAGATASGARSPAATESGCPSGPRGPGEP-CGGLLQPGSTACPTGGDAYSTGPAAV 269
P+ G A +P A++ GP G G P GGLL G GG+A + AA
Sbjct: 271 PETAGEGTAAEAGDAPLASDRRLLLGPAGGGVPKLGGLLPEG------GGEAPAPAAAAE 324
Query: 270 PS 271
PS
Sbjct: 325 PS 326
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 32.3 bits (72), Expect = 0.47
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 28/117 (23%)
Query: 183 EGDQRLVERAQRLDQELLQALEKEEKRNPQICAAGATASGA-RSPAATESGCPSGP---- 237
+ + + + L+++L QA ++ E + + +TA GA R P E P+ P
Sbjct: 417 DAENESMAKIAELEKQLSQARKELETLRERF--SESTAMGASRRPPEPEKAPPAAPTRPS 474
Query: 238 ------------------RGPGEPCGGLLQPGSTACPTGGDAYSTGPAAVPSGTGFP 276
RGPG+ + P + A P+GGDA + G VP+G+ P
Sbjct: 475 ALELKVEELEEKGLIRILRGPGDAVSIEILPVAVATPSGGDAPTPG---VPTGSPSP 528
>gi|239756517 PREDICTED: hypothetical protein [Homo sapiens]
Length = 316
Score = 32.0 bits (71), Expect = 0.61
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 207 EKRNPQICAAGATASGARSPAATESGCPSGPRGPGEPCGGLLQPGS-TACPTG 258
++ PQ+C+AG A G R+ A+ + P PR PG G + + G+ PTG
Sbjct: 187 KRAQPQLCSAGTAARGRRTRASPPT--PPRPRPPGLRSGDVPRGGARVERPTG 237
>gi|239751026 PREDICTED: hypothetical protein XP_002347678 [Homo
sapiens]
Length = 304
Score = 32.0 bits (71), Expect = 0.61
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 207 EKRNPQICAAGATASGARSPAATESGCPSGPRGPGEPCGGLLQPGS-TACPTG 258
++ PQ+C+AG A G R+ A+ + P PR PG G + + G+ PTG
Sbjct: 187 KRAQPQLCSAGTAARGRRTRASPPT--PPRPRPPGLRSGDVPRGGARVERPTG 237
>gi|239745455 PREDICTED: hypothetical protein XP_002343496 [Homo
sapiens]
Length = 304
Score = 32.0 bits (71), Expect = 0.61
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 207 EKRNPQICAAGATASGARSPAATESGCPSGPRGPGEPCGGLLQPGS-TACPTG 258
++ PQ+C+AG A G R+ A+ + P PR PG G + + G+ PTG
Sbjct: 187 KRAQPQLCSAGTAARGRRTRASPPT--PPRPRPPGLRSGDVPRGGARVERPTG 237
>gi|50843837 hypothetical protein LOC55701 [Homo sapiens]
Length = 1519
Score = 32.0 bits (71), Expect = 0.61
Identities = 32/118 (27%), Positives = 42/118 (35%), Gaps = 19/118 (16%)
Query: 169 RFMALGLGLMVKSIEGDQRLVERAQRLDQELLQALEKEEKRNPQICAAGATASGARSPAA 228
R +AL LG E R R Q L++ + Q + +E A+ R+ A
Sbjct: 923 RALALDLGSPAALREWG-RCQARCQELERRIQQHVGEE--------ASPRGYRRRRADGA 973
Query: 229 TESGCPSGPRGPGEPCGGLLQPGS----------TACPTGGDAYSTGPAAVPSGTGFP 276
+ G GPR P LL P S + P G D GP P G P
Sbjct: 974 SSGGAQWGPRSPSPSLSSLLLPSSPGPRPAPSHCSLAPCGEDYEEEGPELAPEAEGRP 1031
>gi|47271475 SPOC domain containing 1 [Homo sapiens]
Length = 1216
Score = 32.0 bits (71), Expect = 0.61
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 16/64 (25%)
Query: 219 TASGARSPAATESGCPSGPRG------------PGEPCGGLLQPGSTACPTGGDAYSTGP 266
T SG P + +GC SG PG PCG P P+GG++ S+
Sbjct: 264 TGSGPGEPGGSGAGCASGTEKFGYLPATGDGPQPGSPCG----PVGFPVPSGGESLSSAA 319
Query: 267 AAVP 270
A P
Sbjct: 320 QAPP 323
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 31.6 bits (70), Expect = 0.80
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 221 SGARSPAATESGCPSGPRGPGEPCGGLLQPGSTACPTGGDAYSTGPAAVPSGTGFP 276
+GA+ A P+GP GP P G + PG+ + G A P TGFP
Sbjct: 832 AGAKGDAGPPG--PAGPAGPPGPIGNVGAPGAKG--------ARGSAGPPGATGFP 877
Score = 28.9 bits (63), Expect = 5.2
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 223 ARSPAATESGCPSGPRGPGEPCGGLLQPGSTACPTGGDAYSTGPAAVPSGTG 274
A +P + PSGP+GPG P G G P G TG P G
Sbjct: 406 AGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAP--GSKGDTGAKGEPGPVG 455
Score = 28.9 bits (63), Expect = 5.2
Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 9/64 (14%)
Query: 220 ASGARSPAATESGCPSGPRGPGEPCGGLLQPGSTACP-------TGGDAYSTGPAAVPSG 272
ASG R P P G GP G PG+ P GD TGPA P
Sbjct: 990 ASGERGPPGPMG--PPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGA 1047
Query: 273 TGFP 276
G P
Sbjct: 1048 PGAP 1051
Score = 28.5 bits (62), Expect = 6.7
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Query: 227 AATESGCPSGPRGPGEPCGGLLQPGSTACPTGGDAYSTGPAAVPSGTGFP 276
A E+G P GPRG P G +PG G A + GPA P G P
Sbjct: 351 AKGEAG-PQGPRGSEGPQGVRGEPGPP-----GPAGAAGPAGNPGADGQP 394
Score = 28.5 bits (62), Expect = 6.7
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 218 ATASGAR-SPAATESGCPSGPRGPGEPCGGLLQPGSTACPTGGDAYSTGPAAVPSGTG 274
A +GAR +P P GP G P G QPG+ P GDA + G A P G
Sbjct: 790 AGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEP--GDAGAKGDAGPPGPAG 845
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 31.6 bits (70), Expect = 0.80
Identities = 45/163 (27%), Positives = 62/163 (38%), Gaps = 31/163 (19%)
Query: 109 PSEFLENPSQSSRLTAPFRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSG-QGHL 167
PS LE P +TA R+ R +K+ RR E K+ + + G+G G
Sbjct: 495 PSAPLEAPEPRKPVTAQERQREREEKR---RRRQERAKEREKRRQERERKERGAGASGGP 551
Query: 168 SRFMALGLGLMVKSIEGDQRLVERAQRLDQELLQALEKEEKRNPQICAAGATASGARSPA 227
S GL L + D+ L+ER R+ + AL T+ A +PA
Sbjct: 552 STDPLAGLVLS----DNDRSLLERWTRMARPAAPAL---------------TSVPAPAPA 592
Query: 228 ATESGCPSGPRGPGEPCGGLLQPGSTACPTGGDAYSTGPAAVP 270
T + P P P PG A PTG S G + P
Sbjct: 593 PTPTPTPVQPTSP--------PPGPVAQPTGPQPQSAGSTSGP 627
>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 31.6 bits (70), Expect = 0.80
Identities = 45/163 (27%), Positives = 62/163 (38%), Gaps = 31/163 (19%)
Query: 109 PSEFLENPSQSSRLTAPFRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSG-QGHL 167
PS LE P +TA R+ R +K+ RR E K+ + + G+G G
Sbjct: 495 PSAPLEAPEPRKPVTAQERQREREEKR---RRRQERAKEREKRRQERERKERGAGASGGP 551
Query: 168 SRFMALGLGLMVKSIEGDQRLVERAQRLDQELLQALEKEEKRNPQICAAGATASGARSPA 227
S GL L + D+ L+ER R+ + AL T+ A +PA
Sbjct: 552 STDPLAGLVLS----DNDRSLLERWTRMARPAAPAL---------------TSVPAPAPA 592
Query: 228 ATESGCPSGPRGPGEPCGGLLQPGSTACPTGGDAYSTGPAAVP 270
T + P P P PG A PTG S G + P
Sbjct: 593 PTPTPTPVQPTSP--------PPGPVAQPTGPQPQSAGSTSGP 627
>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 31.6 bits (70), Expect = 0.80
Identities = 45/163 (27%), Positives = 62/163 (38%), Gaps = 31/163 (19%)
Query: 109 PSEFLENPSQSSRLTAPFRKHVRPKKQHEIRRLGELVKKLSDFTGCTQVVDVGSG-QGHL 167
PS LE P +TA R+ R +K+ RR E K+ + + G+G G
Sbjct: 495 PSAPLEAPEPRKPVTAQERQREREEKR---RRRQERAKEREKRRQERERKERGAGASGGP 551
Query: 168 SRFMALGLGLMVKSIEGDQRLVERAQRLDQELLQALEKEEKRNPQICAAGATASGARSPA 227
S GL L + D+ L+ER R+ + AL T+ A +PA
Sbjct: 552 STDPLAGLVLS----DNDRSLLERWTRMARPAAPAL---------------TSVPAPAPA 592
Query: 228 ATESGCPSGPRGPGEPCGGLLQPGSTACPTGGDAYSTGPAAVP 270
T + P P P PG A PTG S G + P
Sbjct: 593 PTPTPTPVQPTSP--------PPGPVAQPTGPQPQSAGSTSGP 627
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,266,027
Number of Sequences: 37866
Number of extensions: 634136
Number of successful extensions: 4066
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 149
Number of HSP's that attempted gapping in prelim test: 3849
Number of HSP's gapped (non-prelim): 373
length of query: 277
length of database: 18,247,518
effective HSP length: 101
effective length of query: 176
effective length of database: 14,423,052
effective search space: 2538457152
effective search space used: 2538457152
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.