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Search of human proteins with 215982798
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|215982798 sirtuin 1 isoform b [Homo sapiens]
(452 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|215982798 sirtuin 1 isoform b [Homo sapiens] 923 0.0
gi|7657575 sirtuin 1 isoform a [Homo sapiens] 923 0.0
gi|13775600 sirtuin 2 isoform 1 [Homo sapiens] 167 2e-41
gi|13775602 sirtuin 2 isoform 2 [Homo sapiens] 167 2e-41
gi|63054862 sirtuin 3 isoform b [Homo sapiens] 155 7e-38
gi|6912660 sirtuin 3 isoform a [Homo sapiens] 155 7e-38
gi|6912664 sirtuin 5 isoform 1 [Homo sapiens] 70 5e-12
gi|13787215 sirtuin 5 isoform 2 [Homo sapiens] 67 3e-11
gi|6912662 sirtuin 4 [Homo sapiens] 57 3e-08
gi|7706710 sirtuin 6 [Homo sapiens] 53 6e-07
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 37 0.028
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 37 0.028
gi|34482047 adaptor-related protein complex 3, beta 2 subunit [H... 37 0.048
gi|58082089 hypothetical protein LOC161394 [Homo sapiens] 37 0.048
gi|10092601 eukaryotic translation initiation factor 4 gamma, 3 ... 36 0.063
gi|197313732 pleckstrin homology-like domain, family B, member 2... 36 0.082
gi|197313730 pleckstrin homology-like domain, family B, member 2... 36 0.082
gi|197313728 pleckstrin homology-like domain, family B, member 2... 36 0.082
gi|21955172 pleckstrin homology-like domain, family B, member 2 ... 36 0.082
gi|212275945 male-specific lethal 3-like 1 isoform a [Homo sapiens] 35 0.11
gi|17975759 male-specific lethal 3-like 1 isoform b [Homo sapiens] 35 0.11
gi|17975755 male-specific lethal 3-like 1 isoform d [Homo sapiens] 35 0.11
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens] 33 0.69
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens] 33 0.69
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 33 0.69
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 33 0.69
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 33 0.69
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 33 0.69
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 33 0.69
gi|29789072 zinc finger, ZZ-type containing 3 [Homo sapiens] 32 0.90
>gi|215982798 sirtuin 1 isoform b [Homo sapiens]
Length = 452
Score = 923 bits (2386), Expect = 0.0
Identities = 452/452 (100%), Positives = 452/452 (100%)
Query: 1 MFDIEYFRKDPRPFFKFAKEIYPGQFQPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAG 60
MFDIEYFRKDPRPFFKFAKEIYPGQFQPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAG
Sbjct: 1 MFDIEYFRKDPRPFFKFAKEIYPGQFQPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAG 60
Query: 61 IQRIIQCHGSFATASCLICKYKVDCEAVRGDIFNQVVPRCPRCPADEPLAIMKPEIVFFG 120
IQRIIQCHGSFATASCLICKYKVDCEAVRGDIFNQVVPRCPRCPADEPLAIMKPEIVFFG
Sbjct: 61 IQRIIQCHGSFATASCLICKYKVDCEAVRGDIFNQVVPRCPRCPADEPLAIMKPEIVFFG 120
Query: 121 ENLPEQFHRAMKYDKDEVDLLIVIGSSLKVRPVALIPSSIPHEVPQILINREPLPHLHFD 180
ENLPEQFHRAMKYDKDEVDLLIVIGSSLKVRPVALIPSSIPHEVPQILINREPLPHLHFD
Sbjct: 121 ENLPEQFHRAMKYDKDEVDLLIVIGSSLKVRPVALIPSSIPHEVPQILINREPLPHLHFD 180
Query: 181 VELLGDCDVIINELCHRLGGEYAKLCCNPVKLSEITEKPPRTQKELAYLSELPPTPLHVS 240
VELLGDCDVIINELCHRLGGEYAKLCCNPVKLSEITEKPPRTQKELAYLSELPPTPLHVS
Sbjct: 181 VELLGDCDVIINELCHRLGGEYAKLCCNPVKLSEITEKPPRTQKELAYLSELPPTPLHVS 240
Query: 241 EDSSSPERTSPPDSSVIVTLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQM 300
EDSSSPERTSPPDSSVIVTLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQM
Sbjct: 241 EDSSSPERTSPPDSSVIVTLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQM 300
Query: 301 ENPDLKNVGSSTGEKNERTSVAGTVRKCWPNRVAKEQISRRLDGNQYLFLPPNRYIFHGA 360
ENPDLKNVGSSTGEKNERTSVAGTVRKCWPNRVAKEQISRRLDGNQYLFLPPNRYIFHGA
Sbjct: 301 ENPDLKNVGSSTGEKNERTSVAGTVRKCWPNRVAKEQISRRLDGNQYLFLPPNRYIFHGA 360
Query: 361 EVYSDSEDDVLSSSSCGSNSDSGTCQSPSLEEPMEDESEIEEFYNGLEDEPDVPERAGGA 420
EVYSDSEDDVLSSSSCGSNSDSGTCQSPSLEEPMEDESEIEEFYNGLEDEPDVPERAGGA
Sbjct: 361 EVYSDSEDDVLSSSSCGSNSDSGTCQSPSLEEPMEDESEIEEFYNGLEDEPDVPERAGGA 420
Query: 421 GFGTDGDDQEAINEAISVKQEVTDMNYPSNKS 452
GFGTDGDDQEAINEAISVKQEVTDMNYPSNKS
Sbjct: 421 GFGTDGDDQEAINEAISVKQEVTDMNYPSNKS 452
>gi|7657575 sirtuin 1 isoform a [Homo sapiens]
Length = 747
Score = 923 bits (2386), Expect = 0.0
Identities = 452/452 (100%), Positives = 452/452 (100%)
Query: 1 MFDIEYFRKDPRPFFKFAKEIYPGQFQPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAG 60
MFDIEYFRKDPRPFFKFAKEIYPGQFQPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAG
Sbjct: 296 MFDIEYFRKDPRPFFKFAKEIYPGQFQPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAG 355
Query: 61 IQRIIQCHGSFATASCLICKYKVDCEAVRGDIFNQVVPRCPRCPADEPLAIMKPEIVFFG 120
IQRIIQCHGSFATASCLICKYKVDCEAVRGDIFNQVVPRCPRCPADEPLAIMKPEIVFFG
Sbjct: 356 IQRIIQCHGSFATASCLICKYKVDCEAVRGDIFNQVVPRCPRCPADEPLAIMKPEIVFFG 415
Query: 121 ENLPEQFHRAMKYDKDEVDLLIVIGSSLKVRPVALIPSSIPHEVPQILINREPLPHLHFD 180
ENLPEQFHRAMKYDKDEVDLLIVIGSSLKVRPVALIPSSIPHEVPQILINREPLPHLHFD
Sbjct: 416 ENLPEQFHRAMKYDKDEVDLLIVIGSSLKVRPVALIPSSIPHEVPQILINREPLPHLHFD 475
Query: 181 VELLGDCDVIINELCHRLGGEYAKLCCNPVKLSEITEKPPRTQKELAYLSELPPTPLHVS 240
VELLGDCDVIINELCHRLGGEYAKLCCNPVKLSEITEKPPRTQKELAYLSELPPTPLHVS
Sbjct: 476 VELLGDCDVIINELCHRLGGEYAKLCCNPVKLSEITEKPPRTQKELAYLSELPPTPLHVS 535
Query: 241 EDSSSPERTSPPDSSVIVTLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQM 300
EDSSSPERTSPPDSSVIVTLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQM
Sbjct: 536 EDSSSPERTSPPDSSVIVTLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQM 595
Query: 301 ENPDLKNVGSSTGEKNERTSVAGTVRKCWPNRVAKEQISRRLDGNQYLFLPPNRYIFHGA 360
ENPDLKNVGSSTGEKNERTSVAGTVRKCWPNRVAKEQISRRLDGNQYLFLPPNRYIFHGA
Sbjct: 596 ENPDLKNVGSSTGEKNERTSVAGTVRKCWPNRVAKEQISRRLDGNQYLFLPPNRYIFHGA 655
Query: 361 EVYSDSEDDVLSSSSCGSNSDSGTCQSPSLEEPMEDESEIEEFYNGLEDEPDVPERAGGA 420
EVYSDSEDDVLSSSSCGSNSDSGTCQSPSLEEPMEDESEIEEFYNGLEDEPDVPERAGGA
Sbjct: 656 EVYSDSEDDVLSSSSCGSNSDSGTCQSPSLEEPMEDESEIEEFYNGLEDEPDVPERAGGA 715
Query: 421 GFGTDGDDQEAINEAISVKQEVTDMNYPSNKS 452
GFGTDGDDQEAINEAISVKQEVTDMNYPSNKS
Sbjct: 716 GFGTDGDDQEAINEAISVKQEVTDMNYPSNKS 747
>gi|13775600 sirtuin 2 isoform 1 [Homo sapiens]
Length = 389
Score = 167 bits (422), Expect = 2e-41
Identities = 80/176 (45%), Positives = 125/176 (71%), Gaps = 9/176 (5%)
Query: 1 MFDIEYFRKDPRPFFKFAKEIYPGQFQPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAG 60
+F+I YF+K P PFF AKE+YPGQF+P++CH F+ L +G LLR YTQNIDTLE++AG
Sbjct: 118 IFEISYFKKHPEPFFALAKELYPGQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAG 177
Query: 61 IQR--IIQCHGSFATASCL--ICKYKVDCEAVRGDIFNQVVPRCPRCPADEPLAIMKPEI 116
+++ +++ HG+F T+ C+ C+++ ++ IF++V P+C C +++KP+I
Sbjct: 178 LEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQ-----SLVKPDI 232
Query: 117 VFFGENLPEQFHRAMKYDKDEVDLLIVIGSSLKVRPVALIPSSIPHEVPQILINRE 172
VFFGE+LP +F M+ D +VDLL+V+G+SL+V+P A + S P P++LIN+E
Sbjct: 233 VFFGESLPARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINKE 288
>gi|13775602 sirtuin 2 isoform 2 [Homo sapiens]
Length = 352
Score = 167 bits (422), Expect = 2e-41
Identities = 80/176 (45%), Positives = 125/176 (71%), Gaps = 9/176 (5%)
Query: 1 MFDIEYFRKDPRPFFKFAKEIYPGQFQPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAG 60
+F+I YF+K P PFF AKE+YPGQF+P++CH F+ L +G LLR YTQNIDTLE++AG
Sbjct: 81 IFEISYFKKHPEPFFALAKELYPGQFKPTICHYFMRLLKDKGLLLRCYTQNIDTLERIAG 140
Query: 61 IQR--IIQCHGSFATASCL--ICKYKVDCEAVRGDIFNQVVPRCPRCPADEPLAIMKPEI 116
+++ +++ HG+F T+ C+ C+++ ++ IF++V P+C C +++KP+I
Sbjct: 141 LEQEDLVEAHGTFYTSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQ-----SLVKPDI 195
Query: 117 VFFGENLPEQFHRAMKYDKDEVDLLIVIGSSLKVRPVALIPSSIPHEVPQILINRE 172
VFFGE+LP +F M+ D +VDLL+V+G+SL+V+P A + S P P++LIN+E
Sbjct: 196 VFFGESLPARFFSCMQSDFLKVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINKE 251
>gi|63054862 sirtuin 3 isoform b [Homo sapiens]
Length = 257
Score = 155 bits (392), Expect = 7e-38
Identities = 83/206 (40%), Positives = 129/206 (62%), Gaps = 13/206 (6%)
Query: 1 MFDIEYFRKDPRPFFKFAKEIYPGQFQPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAG 60
+F++ +F +P+PFF AKE+YPG ++P++ H F+ L +G LLR YTQNID LE+V+G
Sbjct: 37 IFELPFFFHNPKPFFTLAKELYPGNYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSG 96
Query: 61 I--QRIIQCHGSFATASCLICKYKVDCEAVRGDIFNQVVPRCPRCPADEPLAIMKPEIVF 118
I ++++ HG+FA+A+C +C+ E +R D+ VPRCP C ++KP+IVF
Sbjct: 97 IPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCPVC-----TGVVKPDIVF 151
Query: 119 FGENLPEQFHRAMKYDKDEVDLLIVIGSSLKVRPVALIPSSIPHEVPQILINREPLPHLH 178
FGE LP++F + D DLL+++G+SL+V P A + ++ VP++LINR+ + L
Sbjct: 152 FGEPLPQRFLLHV-VDFPMADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRDLVGPLA 210
Query: 179 F-----DVELLGDCDVIINELCHRLG 199
+ DV LGD + L LG
Sbjct: 211 WHPRSRDVAQLGDVVHGVESLVELLG 236
>gi|6912660 sirtuin 3 isoform a [Homo sapiens]
Length = 399
Score = 155 bits (392), Expect = 7e-38
Identities = 83/206 (40%), Positives = 129/206 (62%), Gaps = 13/206 (6%)
Query: 1 MFDIEYFRKDPRPFFKFAKEIYPGQFQPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAG 60
+F++ +F +P+PFF AKE+YPG ++P++ H F+ L +G LLR YTQNID LE+V+G
Sbjct: 179 IFELPFFFHNPKPFFTLAKELYPGNYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSG 238
Query: 61 I--QRIIQCHGSFATASCLICKYKVDCEAVRGDIFNQVVPRCPRCPADEPLAIMKPEIVF 118
I ++++ HG+FA+A+C +C+ E +R D+ VPRCP C ++KP+IVF
Sbjct: 239 IPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCPVC-----TGVVKPDIVF 293
Query: 119 FGENLPEQFHRAMKYDKDEVDLLIVIGSSLKVRPVALIPSSIPHEVPQILINREPLPHLH 178
FGE LP++F + D DLL+++G+SL+V P A + ++ VP++LINR+ + L
Sbjct: 294 FGEPLPQRFLLHV-VDFPMADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRDLVGPLA 352
Query: 179 F-----DVELLGDCDVIINELCHRLG 199
+ DV LGD + L LG
Sbjct: 353 WHPRSRDVAQLGDVVHGVESLVELLG 378
>gi|6912664 sirtuin 5 isoform 1 [Homo sapiens]
Length = 310
Score = 69.7 bits (169), Expect = 5e-12
Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 14 FFKFAKEIYPGQFQPSLCHKFIALSD----KEGKLLRNYTQNIDTLEQVAGIQRIIQCHG 69
F+ + +E+ G +P+ H+ IA + K+G+ + TQNID L + AG + +++ HG
Sbjct: 101 FYHYRREVM-GSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHG 159
Query: 70 SFATASCLIC-----KYKVD-CEAVRGDIFNQV--------VPRCPRCPADEPLAIMKPE 115
S C C YK C A+ G + V + PRC +++P
Sbjct: 160 SLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPH 219
Query: 116 IVFFGENLPEQFHRAMKYDKDEVDLLIVIGSSLKVRPVALI-PSSIPHEVPQILINREPL 174
+V+FGENL + + DL +V+G+S V P A+ P VP N E
Sbjct: 220 VVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETT 279
Query: 175 PHLH-FDVELLGDCDVIINE--LCH 196
P + F G C + E CH
Sbjct: 280 PATNRFRFHFQGPCGTTLPEALACH 304
>gi|13787215 sirtuin 5 isoform 2 [Homo sapiens]
Length = 299
Score = 67.4 bits (163), Expect = 3e-11
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 14 FFKFAKEIYPGQFQPSLCHKFIALSD----KEGKLLRNYTQNIDTLEQVAGIQRIIQCHG 69
F+ + +E+ G +P+ H+ IA + K+G+ + TQNID L + AG + +++ HG
Sbjct: 101 FYHYRREVM-GSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHG 159
Query: 70 SFATASCLIC-----KYKVD-CEAVRGDIFNQV--------VPRCPRCPADEPLAIMKPE 115
S C C YK C A+ G + V + PRC +++P
Sbjct: 160 SLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPH 219
Query: 116 IVFFGENLPEQFHRAMKYDKDEVDLLIVIGSSLKVRPVALI-PSSIPHEVPQILINREPL 174
+V+FGENL + + DL +V+G+S V P A+ P VP N E
Sbjct: 220 VVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETT 279
Query: 175 PHLHFDVELLGDCDVII 191
P + L+ +II
Sbjct: 280 PATNRFSHLISISSLII 296
>gi|6912662 sirtuin 4 [Homo sapiens]
Length = 314
Score = 57.0 bits (136), Expect = 3e-08
Identities = 50/152 (32%), Positives = 73/152 (48%), Gaps = 34/152 (22%)
Query: 27 QPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAGIQRIIQCHGSFATASCLIC------- 79
QP+ H ++ +K GKL TQN+D L AG +R+ + HG CL C
Sbjct: 120 QPNPAHWALSTWEKLGKLYWLVTQNVDALHTKAGSRRLTELHGCMDRVLCLDCGEQTPRG 179
Query: 80 ----KYKV-----DCE----AVRGDIF---NQV----VPRCPRCPADEPLAIMKPEIVFF 119
+++V E A GD+F QV VP C +C +KP++VFF
Sbjct: 180 VLQERFQVLNPTWSAEAHGLAPDGDVFLSEEQVRSFQVPTCVQCGGH-----LKPDVVFF 234
Query: 120 GENL-PEQFHRAMKYDKDEVDLLIVIGSSLKV 150
G+ + P++ K K E D L+V+GSSL+V
Sbjct: 235 GDTVNPDKVDFVHKRVK-EADSLLVVGSSLQV 265
>gi|7706710 sirtuin 6 [Homo sapiens]
Length = 355
Score = 52.8 bits (125), Expect = 6e-07
Identities = 55/247 (22%), Positives = 99/247 (40%), Gaps = 22/247 (8%)
Query: 27 QPSLCHKFIALSDKEGKLLRNYTQNIDTLEQVAGIQR--IIQCHGSFATASCLICKYKVD 84
+P+ H + ++ G L +QN+D L +G R + + HG+ C CK +
Sbjct: 90 RPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYV 149
Query: 85 CEAVRGDIFNQVVPRCPRCPADEPLAIMKPE----IVFFGENLPEQFHRAMKYDKDEVDL 140
+ V G + + R L + E I+ + ++LP++ DL
Sbjct: 150 RDTVVGTMGLKATGRLCTVAKARGLRACRGELRDTILDWEDSLPDRDLALADEASRNADL 209
Query: 141 LIVIGSSLKVRPVALIPSSIPHEVPQ-ILINREPLPH-LHFDVELLGDCDVIINELCHRL 198
I +G+SL++RP +P + + +++N +P H H D+ + G D ++ L L
Sbjct: 210 SITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPTKHDRHADLRIHGYVDEVMTRLMEHL 269
Query: 199 GGE--------YAKLCCNPV------KLSEITEKPPRTQKELAYLSELPPTPLHVSEDSS 244
G E + P+ KL E P R + + P H + +
Sbjct: 270 GLEIPAWDGPRVLERALPPLPRPPTPKLEPKEESPTRINGSIPAGPKQEPCAQHNGSEPA 329
Query: 245 SPERTSP 251
SP+R P
Sbjct: 330 SPKRERP 336
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 37.4 bits (85), Expect = 0.028
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 30/221 (13%)
Query: 242 DSSSPERTSPPDSS--VIVTLLDQAAKSNDDLDVSESKGCMEEKPQEVQTS-RNVESIAE 298
+S+ +R P S ++ L + +N + ++ K E K +E Q S RN A+
Sbjct: 53 ESTDTKRQKPSVHSRQLVSKPLSSSVSNNKRIVSTKGKSATEYKNEEYQRSERNKRLDAD 112
Query: 299 QMENPDLKNVGSSTGEKNERTSVAGTVRKCWPNRVAKEQISRRLDGNQYLFLPPNRYIFH 358
+ ++ S++ E + VRK P R AK S DG++ + L +R
Sbjct: 113 RK----IRLSSSASREPYKNQPEKTCVRKRDPERRAK---SPTPDGSERIGLEVDRRASR 165
Query: 359 GA-----EVYSDSEDDVLSSSSCGSNSDSGTC---QSPSLEEPMEDESEIEEFYNGLEDE 410
+ EV S+ + S GS+ + G + +EE +E++ E+EE E++
Sbjct: 166 SSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEE---DAEED 222
Query: 411 PDVPERAGGAGFGTDGDDQEAINEAISVKQEVTDMNYPSNK 451
+V E DG+++E E ++E + Y ++
Sbjct: 223 EEVDE---------DGEEEEEEEEEEEEEEEEEEEEYEQDE 254
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 37.4 bits (85), Expect = 0.028
Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 30/221 (13%)
Query: 242 DSSSPERTSPPDSS--VIVTLLDQAAKSNDDLDVSESKGCMEEKPQEVQTS-RNVESIAE 298
+S+ +R P S ++ L + +N + ++ K E K +E Q S RN A+
Sbjct: 53 ESTDTKRQKPSVHSRQLVSKPLSSSVSNNKRIVSTKGKSATEYKNEEYQRSERNKRLDAD 112
Query: 299 QMENPDLKNVGSSTGEKNERTSVAGTVRKCWPNRVAKEQISRRLDGNQYLFLPPNRYIFH 358
+ ++ S++ E + VRK P R AK S DG++ + L +R
Sbjct: 113 RK----IRLSSSASREPYKNQPEKTCVRKRDPERRAK---SPTPDGSERIGLEVDRRASR 165
Query: 359 GA-----EVYSDSEDDVLSSSSCGSNSDSGTC---QSPSLEEPMEDESEIEEFYNGLEDE 410
+ EV S+ + S GS+ + G + +EE +E++ E+EE E++
Sbjct: 166 SSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEE---DAEED 222
Query: 411 PDVPERAGGAGFGTDGDDQEAINEAISVKQEVTDMNYPSNK 451
+V E DG+++E E ++E + Y ++
Sbjct: 223 EEVDE---------DGEEEEEEEEEEEEEEEEEEEEYEQDE 254
>gi|34482047 adaptor-related protein complex 3, beta 2 subunit [Homo
sapiens]
Length = 1082
Score = 36.6 bits (83), Expect = 0.048
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 364 SDSEDDVLSSSSCGSNSDSGTCQSPSLEEPMEDESEIEEFYNGLEDEPD----------- 412
+DS+ + S S S+S+SG+ +S S E ED+ E EE G E E
Sbjct: 691 ADSDPESESESDSKSSSESGSGESSS-ESDNEDQDEDEEKGRGSESEQSEEDGKRKTKKK 749
Query: 413 VPERAGGAGFGTDGDDQEAINEAISVKQE 441
VPER G A +G D + + + E
Sbjct: 750 VPERKGEASSSDEGSDSSSSSSESEMTSE 778
>gi|58082089 hypothetical protein LOC161394 [Homo sapiens]
Length = 674
Score = 36.6 bits (83), Expect = 0.048
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 212 LSEITEKPPRTQKELAYLSELPPTPLHVSEDSSSPERTSPPDSSVIVTLLDQAAKSNDDL 271
L E +PP+ K P TP +S+ +RT PP+ + + L + KS+++
Sbjct: 225 LEETDLQPPKMTK--------PETPEETQRESTEKKRTEPPEQARLEFLEKEPRKSSEEA 276
Query: 272 DVSESKGCMEEKPQEVQTSRNVESIAEQME 301
+ + E P+E+Q E E E
Sbjct: 277 GLEPPEETQPEVPEEMQRKATEEKGTELPE 306
>gi|10092601 eukaryotic translation initiation factor 4 gamma, 3
[Homo sapiens]
Length = 1585
Score = 36.2 bits (82), Expect = 0.063
Identities = 57/268 (21%), Positives = 97/268 (36%), Gaps = 31/268 (11%)
Query: 180 DVELLGDCDVI--INELCHRLGG-----EYAKLCCNPVKLS-EITEKPPRTQKELAYLSE 231
D+ L+ ++I IN + +L E K P+ L EI E PP K +
Sbjct: 346 DIPLVSSTNLINEINGVSEKLSATESIVEIVKQEVLPLTLELEILENPPEEMKLECIPAP 405
Query: 232 LPPTPLHVSEDSSSPERTSPPDSSVIVTLLDQAAKSNDD-------LDVSES-KGCMEEK 283
+ P+ + + SPP + VIV S L+ ES + C+ E
Sbjct: 406 ITPSTVPSFPPTPPTPPASPPHTPVIVPAAATTVSSPSAAITVQRVLEEDESIRTCLSED 465
Query: 284 PQEVQTSRNVESIAEQMENPDLKNVGSSTGEKNERTSVAGTVRKCWP-----NRVAKEQI 338
+E+Q VE+ + E D +N+ S +A TV K W R +E +
Sbjct: 466 AKEIQNKIEVEADGQTEEILDSQNLNSR--RSPVPAQIAITVPKTWKKPKDRTRTTEEML 523
Query: 339 SRRLDGNQYLFLPPNRYIFHGAEVYSDSEDDVLSSSSCGSNSDSGTCQSPSLEEPMEDES 398
L+ L ++ + +SE D +S S + ++EE E+
Sbjct: 524 EAELELKAEEELSIDKVL--------ESEQDKMSQGFHPERDPSDLKKVKAVEENGEEAE 575
Query: 399 EIEEFYNGLEDEPDVPERAGGAGFGTDG 426
+ + + + +G DG
Sbjct: 576 PVRNGAESVSEGEGIDANSGSTDSSGDG 603
>gi|197313732 pleckstrin homology-like domain, family B, member 2
isoform a [Homo sapiens]
Length = 1253
Score = 35.8 bits (81), Expect = 0.082
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 208 NPVKLSEITEKPP-------RTQKELAYLSELPPTPLHVSEDSSSPERTSPPDSSVIV-- 258
N LS++T PP + E +YLS LP TP +SE+ S E + ++ +++
Sbjct: 540 NDELLSDLTRTPPPPSSTFPKASSESSYLSILPKTPEGISEEQRSQELAAMEETRIVILN 599
Query: 259 ---TLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQMENPDLKNVGSSTGEK 315
L + ND +D S + ME + + + ++ E D N + EK
Sbjct: 600 NLEELKQKIKDINDQMDESFRELDMECALLDGEQKSETTELMKEKEILDHLNRKIAELEK 659
Query: 316 N 316
N
Sbjct: 660 N 660
>gi|197313730 pleckstrin homology-like domain, family B, member 2
isoform a [Homo sapiens]
Length = 1253
Score = 35.8 bits (81), Expect = 0.082
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 208 NPVKLSEITEKPP-------RTQKELAYLSELPPTPLHVSEDSSSPERTSPPDSSVIV-- 258
N LS++T PP + E +YLS LP TP +SE+ S E + ++ +++
Sbjct: 540 NDELLSDLTRTPPPPSSTFPKASSESSYLSILPKTPEGISEEQRSQELAAMEETRIVILN 599
Query: 259 ---TLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQMENPDLKNVGSSTGEK 315
L + ND +D S + ME + + + ++ E D N + EK
Sbjct: 600 NLEELKQKIKDINDQMDESFRELDMECALLDGEQKSETTELMKEKEILDHLNRKIAELEK 659
Query: 316 N 316
N
Sbjct: 660 N 660
>gi|197313728 pleckstrin homology-like domain, family B, member 2
isoform b [Homo sapiens]
Length = 1237
Score = 35.8 bits (81), Expect = 0.082
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 208 NPVKLSEITEKPP-------RTQKELAYLSELPPTPLHVSEDSSSPERTSPPDSSVIV-- 258
N LS++T PP + E +YLS LP TP +SE+ S E + ++ +++
Sbjct: 567 NDELLSDLTRTPPPPSSTFPKASSESSYLSILPKTPEGISEEQRSQELAAMEETRIVILN 626
Query: 259 ---TLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQMENPDLKNVGSSTGEK 315
L + ND +D S + ME + + + ++ E D N + EK
Sbjct: 627 NLEELKQKIKDINDQMDESFRELDMECALLDGEQKSETTELMKEKEILDHLNRKIAELEK 686
Query: 316 N 316
N
Sbjct: 687 N 687
>gi|21955172 pleckstrin homology-like domain, family B, member 2
isoform c [Homo sapiens]
Length = 1210
Score = 35.8 bits (81), Expect = 0.082
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 208 NPVKLSEITEKPP-------RTQKELAYLSELPPTPLHVSEDSSSPERTSPPDSSVIV-- 258
N LS++T PP + E +YLS LP TP +SE+ S E + ++ +++
Sbjct: 540 NDELLSDLTRTPPPPSSTFPKASSESSYLSILPKTPEGISEEQRSQELAAMEETRIVILN 599
Query: 259 ---TLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQMENPDLKNVGSSTGEK 315
L + ND +D S + ME + + + ++ E D N + EK
Sbjct: 600 NLEELKQKIKDINDQMDESFRELDMECALLDGEQKSETTELMKEKEILDHLNRKIAELEK 659
Query: 316 N 316
N
Sbjct: 660 N 660
>gi|212275945 male-specific lethal 3-like 1 isoform a [Homo sapiens]
Length = 521
Score = 35.4 bits (80), Expect = 0.11
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 251 PPDSSVIVTLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQMENPDLKNVGS 310
P SV+ L + ND+ +S S C E K +E+ ++E E E P+L+
Sbjct: 107 PGVDSVLKGLPTEEKDENDENSLSSSSDCSENKDEEISEESDIEEKTEVKEEPELQ---- 162
Query: 311 STGEKNERT 319
+ E ERT
Sbjct: 163 TRREMEERT 171
>gi|17975759 male-specific lethal 3-like 1 isoform b [Homo sapiens]
Length = 462
Score = 35.4 bits (80), Expect = 0.11
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 251 PPDSSVIVTLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQMENPDLKNVGS 310
P SV+ L + ND+ +S S C E K +E+ ++E E E P+L+
Sbjct: 48 PGVDSVLKGLPTEEKDENDENSLSSSSDCSENKDEEISEESDIEEKTEVKEEPELQ---- 103
Query: 311 STGEKNERT 319
+ E ERT
Sbjct: 104 TRREMEERT 112
>gi|17975755 male-specific lethal 3-like 1 isoform d [Homo sapiens]
Length = 416
Score = 35.4 bits (80), Expect = 0.11
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 251 PPDSSVIVTLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQMENPDLKNVGS 310
P SV+ L + ND+ +S S C E K +E+ ++E E E P+L+
Sbjct: 107 PGVDSVLKGLPTEEKDENDENSLSSSSDCSENKDEEISEESDIEEKTEVKEEPELQ---- 162
Query: 311 STGEKNERT 319
+ E ERT
Sbjct: 163 TRREMEERT 171
>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
Length = 2039
Score = 32.7 bits (73), Expect = 0.69
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 9/161 (5%)
Query: 163 EVPQILINREPLPHLHFDVELLGDCDVIINELC---HRLGGEYAKLCCNPVKLSEITEKP 219
E QIL ++ PLP + E D D IN++ H L E K + + + K
Sbjct: 320 ESKQILPSKTPLPSALDEYEFKDDDDEEINKMIDDRHILRKEQRKENEPEAEKTHLFAKQ 379
Query: 220 PRT--QKELAYLSELPPTPLHVSEDSSSPERTSPPDSSVIVTLLDQAAKSNDDLDVSESK 277
+ K + P L+ S +SS E S +++ + SN D+ +
Sbjct: 380 EKAFYPKSFKSKKQKPSRVLYSSTESSDEEALQNKKISTSCSVIPET--SNSDMQTKKEY 437
Query: 278 GCMEEKPQEVQTSRNVESIAEQMENPDLKNVGSSTGEKNER 318
E Q+ + R +++ + EN +LK G++N R
Sbjct: 438 VVSGEHKQKGKVKRKLKNQNKNKENQELKQ--EKEGKENTR 476
>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
Length = 2062
Score = 32.7 bits (73), Expect = 0.69
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 9/161 (5%)
Query: 163 EVPQILINREPLPHLHFDVELLGDCDVIINELC---HRLGGEYAKLCCNPVKLSEITEKP 219
E QIL ++ PLP + E D D IN++ H L E K + + + K
Sbjct: 343 ESKQILPSKTPLPSALDEYEFKDDDDEEINKMIDDRHILRKEQRKENEPEAEKTHLFAKQ 402
Query: 220 PRT--QKELAYLSELPPTPLHVSEDSSSPERTSPPDSSVIVTLLDQAAKSNDDLDVSESK 277
+ K + P L+ S +SS E S +++ + SN D+ +
Sbjct: 403 EKAFYPKSFKSKKQKPSRVLYSSTESSDEEALQNKKISTSCSVIPET--SNSDMQTKKEY 460
Query: 278 GCMEEKPQEVQTSRNVESIAEQMENPDLKNVGSSTGEKNER 318
E Q+ + R +++ + EN +LK G++N R
Sbjct: 461 VVSGEHKQKGKVKRKLKNQNKNKENQELKQ--EKEGKENTR 499
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 32.7 bits (73), Expect = 0.69
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 39/222 (17%)
Query: 210 VKLSEITEKPPRTQKELAYLSE-LPPTPLHVSED----------SSSPERTSPPDSSVIV 258
VK S + PPR +E L + P E+ S S +TS +SS
Sbjct: 215 VKASHWSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESS--- 271
Query: 259 TLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQMENPDLKNVGSSTGEKNER 318
+A+S + E + EE+ +E TS E E+ E + + GS++ E +E+
Sbjct: 272 -----SAESGSGSEEEEEEE--EEEEEEGSTSEESEEEEEEEEEEE-EETGSNSEEASEQ 323
Query: 319 TSVAGTVRKCWPNRVAKEQIS---RRLDGNQYLFLPPNRYIFHGAEVYSDSEDDVLSSSS 375
++ V++E++S R + N L +P +R+ E ++E++V +
Sbjct: 324 SA----------EEVSEEEMSEDEERENENHLLVVPESRFDRDSGE-SEEAEEEVGEGTP 372
Query: 376 CGSNSDSG--TCQSPSLEEPMEDESEIEEFYNGLEDEPDVPE 415
S G SP+L P+E + E+ ++ L+ V E
Sbjct: 373 QSSALTEGDYVPDSPAL-SPIELKQELPKYLPALQGCRSVEE 413
Score = 30.8 bits (68), Expect = 2.6
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 364 SDSEDDVLSSSSCGSNSDSGTCQSPSLEEPMEDESEIEEFYNGLEDEPDVPERAGGAGF- 422
SDSE S+ S + S SG+ + EE E+E E E+E + E G+
Sbjct: 259 SDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSE 318
Query: 423 -GTDGDDQEAINEAISVKQEVTDMNY 447
++ +E E +S +E + N+
Sbjct: 319 EASEQSAEEVSEEEMSEDEERENENH 344
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 32.7 bits (73), Expect = 0.69
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 39/222 (17%)
Query: 210 VKLSEITEKPPRTQKELAYLSE-LPPTPLHVSED----------SSSPERTSPPDSSVIV 258
VK S + PPR +E L + P E+ S S +TS +SS
Sbjct: 224 VKASHWSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESS--- 280
Query: 259 TLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQMENPDLKNVGSSTGEKNER 318
+A+S + E + EE+ +E TS E E+ E + + GS++ E +E+
Sbjct: 281 -----SAESGSGSEEEEEEE--EEEEEEGSTSEESEEEEEEEEEEE-EETGSNSEEASEQ 332
Query: 319 TSVAGTVRKCWPNRVAKEQIS---RRLDGNQYLFLPPNRYIFHGAEVYSDSEDDVLSSSS 375
++ V++E++S R + N L +P +R+ E ++E++V +
Sbjct: 333 SA----------EEVSEEEMSEDEERENENHLLVVPESRFDRDSGE-SEEAEEEVGEGTP 381
Query: 376 CGSNSDSG--TCQSPSLEEPMEDESEIEEFYNGLEDEPDVPE 415
S G SP+L P+E + E+ ++ L+ V E
Sbjct: 382 QSSALTEGDYVPDSPAL-SPIELKQELPKYLPALQGCRSVEE 422
Score = 30.8 bits (68), Expect = 2.6
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 364 SDSEDDVLSSSSCGSNSDSGTCQSPSLEEPMEDESEIEEFYNGLEDEPDVPERAGGAGF- 422
SDSE S+ S + S SG+ + EE E+E E E+E + E G+
Sbjct: 268 SDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSE 327
Query: 423 -GTDGDDQEAINEAISVKQEVTDMNY 447
++ +E E +S +E + N+
Sbjct: 328 EASEQSAEEVSEEEMSEDEERENENH 353
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 32.7 bits (73), Expect = 0.69
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 39/222 (17%)
Query: 210 VKLSEITEKPPRTQKELAYLSE-LPPTPLHVSED----------SSSPERTSPPDSSVIV 258
VK S + PPR +E L + P E+ S S +TS +SS
Sbjct: 192 VKASHWSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESS--- 248
Query: 259 TLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQMENPDLKNVGSSTGEKNER 318
+A+S + E + EE+ +E TS E E+ E + + GS++ E +E+
Sbjct: 249 -----SAESGSGSEEEEEEE--EEEEEEGSTSEESEEEEEEEEEEE-EETGSNSEEASEQ 300
Query: 319 TSVAGTVRKCWPNRVAKEQIS---RRLDGNQYLFLPPNRYIFHGAEVYSDSEDDVLSSSS 375
++ V++E++S R + N L +P +R+ E ++E++V +
Sbjct: 301 SA----------EEVSEEEMSEDEERENENHLLVVPESRFDRDSGE-SEEAEEEVGEGTP 349
Query: 376 CGSNSDSG--TCQSPSLEEPMEDESEIEEFYNGLEDEPDVPE 415
S G SP+L P+E + E+ ++ L+ V E
Sbjct: 350 QSSALTEGDYVPDSPAL-SPIELKQELPKYLPALQGCRSVEE 390
Score = 30.8 bits (68), Expect = 2.6
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 364 SDSEDDVLSSSSCGSNSDSGTCQSPSLEEPMEDESEIEEFYNGLEDEPDVPERAGGAGF- 422
SDSE S+ S + S SG+ + EE E+E E E+E + E G+
Sbjct: 236 SDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSE 295
Query: 423 -GTDGDDQEAINEAISVKQEVTDMNY 447
++ +E E +S +E + N+
Sbjct: 296 EASEQSAEEVSEEEMSEDEERENENH 321
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 32.7 bits (73), Expect = 0.69
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 39/222 (17%)
Query: 210 VKLSEITEKPPRTQKELAYLSE-LPPTPLHVSED----------SSSPERTSPPDSSVIV 258
VK S + PPR +E L + P E+ S S +TS +SS
Sbjct: 181 VKASHWSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESS--- 237
Query: 259 TLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQMENPDLKNVGSSTGEKNER 318
+A+S + E + EE+ +E TS E E+ E + + GS++ E +E+
Sbjct: 238 -----SAESGSGSEEEEEEE--EEEEEEGSTSEESEEEEEEEEEEE-EETGSNSEEASEQ 289
Query: 319 TSVAGTVRKCWPNRVAKEQIS---RRLDGNQYLFLPPNRYIFHGAEVYSDSEDDVLSSSS 375
++ V++E++S R + N L +P +R+ E ++E++V +
Sbjct: 290 SA----------EEVSEEEMSEDEERENENHLLVVPESRFDRDSGE-SEEAEEEVGEGTP 338
Query: 376 CGSNSDSG--TCQSPSLEEPMEDESEIEEFYNGLEDEPDVPE 415
S G SP+L P+E + E+ ++ L+ V E
Sbjct: 339 QSSALTEGDYVPDSPAL-SPIELKQELPKYLPALQGCRSVEE 379
Score = 30.8 bits (68), Expect = 2.6
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 364 SDSEDDVLSSSSCGSNSDSGTCQSPSLEEPMEDESEIEEFYNGLEDEPDVPERAGGAGF- 422
SDSE S+ S + S SG+ + EE E+E E E+E + E G+
Sbjct: 225 SDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSE 284
Query: 423 -GTDGDDQEAINEAISVKQEVTDMNY 447
++ +E E +S +E + N+
Sbjct: 285 EASEQSAEEVSEEEMSEDEERENENH 310
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 32.7 bits (73), Expect = 0.69
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 39/222 (17%)
Query: 210 VKLSEITEKPPRTQKELAYLSE-LPPTPLHVSED----------SSSPERTSPPDSSVIV 258
VK S + PPR +E L + P E+ S S +TS +SS
Sbjct: 226 VKASHWSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESS--- 282
Query: 259 TLLDQAAKSNDDLDVSESKGCMEEKPQEVQTSRNVESIAEQMENPDLKNVGSSTGEKNER 318
+A+S + E + EE+ +E TS E E+ E + + GS++ E +E+
Sbjct: 283 -----SAESGSGSEEEEEEE--EEEEEEGSTSEESEEEEEEEEEEE-EETGSNSEEASEQ 334
Query: 319 TSVAGTVRKCWPNRVAKEQIS---RRLDGNQYLFLPPNRYIFHGAEVYSDSEDDVLSSSS 375
++ V++E++S R + N L +P +R+ E ++E++V +
Sbjct: 335 SA----------EEVSEEEMSEDEERENENHLLVVPESRFDRDSGE-SEEAEEEVGEGTP 383
Query: 376 CGSNSDSG--TCQSPSLEEPMEDESEIEEFYNGLEDEPDVPE 415
S G SP+L P+E + E+ ++ L+ V E
Sbjct: 384 QSSALTEGDYVPDSPAL-SPIELKQELPKYLPALQGCRSVEE 424
Score = 30.8 bits (68), Expect = 2.6
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 364 SDSEDDVLSSSSCGSNSDSGTCQSPSLEEPMEDESEIEEFYNGLEDEPDVPERAGGAGF- 422
SDSE S+ S + S SG+ + EE E+E E E+E + E G+
Sbjct: 270 SDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSE 329
Query: 423 -GTDGDDQEAINEAISVKQEVTDMNY 447
++ +E E +S +E + N+
Sbjct: 330 EASEQSAEEVSEEEMSEDEERENENH 355
>gi|29789072 zinc finger, ZZ-type containing 3 [Homo sapiens]
Length = 903
Score = 32.3 bits (72), Expect = 0.90
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 284 PQEVQTSRNVESIAEQMENPDLKNVGSSTGEKNERTSVAGT-VRKCWPNRVA---KEQIS 339
P+EV+ SR + IA+++ N K V S + + + AG V PN K S
Sbjct: 672 PEEVE-SRRWQKIADELGNRTAKQVASRVQKYFIKLTKAGIPVPGRTPNLYIYSKKSSTS 730
Query: 340 RRLDG-NQYLFLPPNRYIFHGAEVYSDSEDDVLSSSSCGSNSDSGTCQSPSLEEPMEDES 398
RR N++LF P H VY D +DD SC + + ++E+ +DES
Sbjct: 731 RRQHPLNKHLFKPSTFMTSHEPPVYMDEDDD----RSCFHSH-----MNTAVEDASDDES 781
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,316,497
Number of Sequences: 37866
Number of extensions: 960877
Number of successful extensions: 3215
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 3021
Number of HSP's gapped (non-prelim): 229
length of query: 452
length of database: 18,247,518
effective HSP length: 106
effective length of query: 346
effective length of database: 14,233,722
effective search space: 4924867812
effective search space used: 4924867812
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.